Search results for " AMINO"

showing 10 items of 789 documents

Cellular UDP-Glucose Deficiency Caused by a Single Point Mutation in the UDP-Glucose Pyrophosphorylase Gene

1997

We previously isolated a mutant cell that is the only mammalian cell reported to have a persistently low level of UDP-glucose. In this work we obtained a spontaneous revertant whose UDP-glucose level lies between those found in the wild type and the mutant cell. The activity of UDP-glucose pyrophosphorylase (UDPG:PP), the enzyme that catalyzes the formation of UDP-glucose, was in the mutant 4% and in the revertant 56% of the activity found in the wild type cell. Sequence analysis of UDPG: PP cDNAs from the mutant cell showed one missense mutation, which changes amino acid residue 115 from glycine to aspartic acid. The substituted glycine is located within the largest stretch of strictly con…

Uridine Diphosphate GlucoseDNA ComplementaryMagnetic Resonance SpectroscopyUTP-Glucose-1-Phosphate UridylyltransferaseMolecular Sequence DataMutantDeoxyglucoseBiologymedicine.disease_causeBiochemistryProtein Structure SecondaryCell LineCricetulusCricetinaeAspartic acidmedicineAnimalsPoint MutationMissense mutationAmino Acid SequenceMolecular Biologychemistry.chemical_classificationMutationSequence Homology Amino AcidPoint mutationWild typeCell BiologyMolecular biologyEnzymeBiochemistrychemistryGlycineJournal of Biological Chemistry
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The pea sulfate transporter, PsSULTR4, contributes to seed yield and quality

2023

To investigate the role of vacuolar sulfate in seed yield and quality, we have targeted the single pea SULTR4 gene (PsSULTR4), which encodes a transporter homologous to Arabidopsis SULTR4;1 and 4;2 that allow sulfate efflux from the vacuole to the cytosol. By simulating the 3D structure of PsSULTR4, we observed that it is similar to that of SULTR4;1 in Arabidopsis. Furthermore, a phylogenetic analysis revealed a high level of conservation of SULTR4 protein motifs across land species. A fluorescent protein fusion experiment confirmed that PsSULTR4 localizes to the vacuolar membrane.Five sultr4 mutants were identified by TILLING (Targeting Induced Local Lesions IN Genomes), two of which showe…

Vacuolar sulfateSeed yieldSulfate transporter SULTR4[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologySeed qualitySulfur amino acidsSulfur deficiencyPisum sativumStorage proteins
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Gas chromatography-mass spectrometry characterization of the varnish and glue of an ancient 18th century double bass.

2007

A GC–MS investigation is conducted on the double bass “Panormus”, property of Conservatorio di Musica “Vincenzo Bellini” in Palermo. The most important components of the varnish (fatty acids) and of the glue (proteinaceous amino acids), with which the musical instrument was treated in the past, are determined. The analyses are carried out by prior derivatization of fatty acids by acidic methanol and of amino acids by acidic methanol and trifluoroacetic anhydride (TFAA). Analytes identification is achieved by direct comparison with several reference materials and the use of a digitized library.

VarnishMusical instrumentMass spectrometryBiochemistrySettore CHIM/12 - Chimica Dell'Ambiente E Dei Beni CulturaliGas Chromatography-Mass SpectrometryAnalytical Chemistrychemistry.chemical_compoundDouble bass Art analysis Derivatization GC Binding media Varnish Fatty acids Amino acids ResinsAdhesivesPaintOrganic chemistrySettore CHIM/01 - Chimica AnaliticaAmino AcidsDerivatizationFatty acid methyl esterChromatographyOrganic ChemistryFatty AcidsGeneral Medicinechemistryvisual_artvisual_art.visual_art_mediumGas chromatographyGas chromatography–mass spectrometryTrifluoroacetic anhydrideMusicJournal of chromatography. A
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Paenibacillus larvae Chitin-Degrading Protein PlCBP49 Is a Key Virulence Factor in American Foulbrood of Honey Bees

2014

Paenibacillus larvae, the etiological agent of the globally occurring epizootic American Foulbrood (AFB) of honey bees, causes intestinal infections in honey bee larvae which develop into systemic infections inevitably leading to larval death. Massive brood mortality might eventually lead to collapse of the entire colony. Molecular mechanisms of host-microbe interactions in this system and of differences in virulence between P. larvae genotypes are poorly understood. Recently, it was demonstrated that the degradation of the peritrophic matrix lining the midgut epithelium is a key step in pathogenesis of P. larvae infections. Here, we present the isolation and identification of PlCBP49, a mo…

Veterinary MicrobiologyChitinPathogenesisPathology and Laboratory MedicineVirulence factorchemistry.chemical_compoundMedicine and Health SciencesPeritrophic matrixlcsh:QH301-705.5biologyVirulenceGram Positive BacteriaBeesVeterinary BacteriologyBacterial PathogensVeterinary DiseasesMedical MicrobiologyLarvaHost-Pathogen InteractionsPaenibacillusResearch Articlelcsh:Immunologic diseases. Allergy570American foulbroodVirulence FactorsImmunologyMolecular Sequence DataVirulenceMicrobiologyMicrobiologyChitinBacterial ProteinsVirologyGeneticsAnimalsAmino Acid SequenceMolecular BiologyMicrobial PathogensGram-Positive Bacterial InfectionsSequence Homology Amino AcidfungiBiology and Life SciencesMidgutBacteriologyHoney beebiology.organism_classificationlcsh:Biology (General)chemistryProteolysisParasitologyVeterinary Sciencelcsh:RC581-607BacteriaPLoS Pathogens
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Expression of the human XPB/ERCC-3 excision repair gene-homolog in the sponge Geodia cydonium after exposure to ultraviolet radiation.

1998

Abstract The marine demosponge Geodia cydonium encodes a gene, termed GCXPB , which displays 62% identity to the human XPB/ERCC-3 gene that specifically corrects the repair defect in xeroderma pigmentosum and in Cockayne's syndrome. The cDNA was isolated and characterized the deduced aa sequence, XPB_GEOCY, with the calculated size of 91,541 Da comprises the characteristic domains found in the related helicases. Phylogenetic tree analysis revealed that the sponge sequence is grouped to the metazoan related XPB/ERCC-3 polypeptides. Northern Blot analyses have been performed with sponge samples collected at different depths, thus exposed to different intensities of UV sunlight in the field. T…

Xeroderma pigmentosumDNA ComplementaryDNA RepairUltraviolet RaysMolecular Sequence DataBiologyToxicologyRadiation ToleranceEvolution MolecularComplementary DNAGene expressionGeneticsmedicineAnimalsNorthern blotAmino Acid SequenceCloning MolecularMolecular BiologyGenePhylogenyGeneticsinduced dna-damage; xeroderma-pigmentosum; cockaynes-syndrome; alignment; biomarker; protein; stressSequence Homology Amino AcidNucleic acid sequenceDNA HelicasesHelicaseSequence Analysis DNAmedicine.diseaseMolecular biologyPoriferaUp-RegulationDNA-Binding Proteinsbiology.proteinNucleotide excision repairDNA DamageMutation research
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The diversity and evolution of chelicerate hemocyanins

2012

Abstract Background Oxygen transport in the hemolymph of many arthropod species is facilitated by large copper-proteins referred to as hemocyanins. Arthropod hemocyanins are hexamers or oligomers of hexamers, which are characterized by a high O2 transport capacity and a high cooperativity, thereby enhancing O2 supply. Hemocyanin subunit sequences had been available from horseshoe crabs (Xiphosura) and various spiders (Araneae), but not from any other chelicerate taxon. To trace the evolution of hemocyanins and the emergence of the large hemocyanin oligomers, hemocyanin cDNA sequences were obtained from representatives of selected chelicerate classes. Results Hemocyanin subunits from a sea s…

XiphosurabiologySequence Homology Amino AcidEvolutionmedicine.medical_treatmentOxygen transportZoologyHemocyaninbiology.organism_classificationBiological EvolutionHorseshoe crabArthropod ProteinsEvolution MolecularHemolymphHemocyaninsmedicineQH359-425AnimalsSea spiderArthropodMolecular clockArthropodsEcology Evolution Behavior and SystematicsPhylogenyResearch ArticleBMC Evolutionary Biology
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Electrophysiological and morphological properties of Cajal–Retzius cells with different ontogenetic origins

2010

International audience; The different origins of Cajal-Retzius cells (CRc) as well as their diverse molecular profile suggest that this cell type may represent different neuronal subpopulations. In order to investigate whether CRc from different origins show distinct functional or morphological characteristics we used transgenic Dbx1(cre);ROSA26(YFP) mice in which two subpopulations of CRc, originating from the septum and ventral pallium (VP) at the pallial-subpallial border (PSB), were permanently labeled by yellow fluorescent protein (YFP) expression. Electrophysiological properties of YFP(+) and YFP(-) CRc were investigated by whole-cell patch-clamp recordings, while a thorough somatoden…

Yellow fluorescent proteinCell typePatch-Clamp TechniquesNeurogenesisAction PotentialsGlutamic AcidMice Transgenicmacromolecular substancesReceptors N-Methyl-D-AspartateMembrane PotentialsMice03 medical and health scienceschemistry.chemical_compoundOrgan Culture Techniques0302 clinical medicineBiocytinAnimalsCell LineagePatch clampCell Shapegamma-Aminobutyric AcidImage Cytometry030304 developmental biologyCerebral CortexNeurons0303 health sciencesbiologyStem CellsGeneral NeurosciencefungiCell DifferentiationDendritesHyperpolarization (biology)digestive system diseasesCell biologyLuminescent ProteinsElectrophysiologynervous systemchemistrybiology.proteinGABAergic[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]DBX1Nerve NetExcitatory Amino Acid Antagonists030217 neurology & neurosurgeryNeuroscience
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The formal redox potential of the Yb(III,II) Couple at 0°C in 3.22 molal NaCl medium

2004

Following our previous investigations on aqueous solutions of hypooxidized and iperoxidized species, we managed, by lowering the temperature of the solutions to 0 degrees C, to obtain, by electrochemical methods, Yb(II) and Yb(III) mixtures, enough stable to determine by a potentiometric method the formal redox potential of the Yb(IlI, II) couple. Its value, in a large range of total Ytterbium concentration, is -1233 +/- 3 mV against the molal hydrogen electrode in the 3.22 m NaCl medium.

YtterbiumMolalityAqueous solutionStandard hydrogen electrodeChemistryInorganic chemistryvanadium amino acids ionic mediumTemperaturechemistry.chemical_elementLarge rangeSodium ChlorideElectrochemistryRedoxAnalytical ChemistryElectrochemistryElectroanalytical methodYtterbiumOxidation-ReductionGeneral Environmental Science
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Killer toxin-secreting double-stranded RNA mycoviruses in the yeasts Hanseniaspora uvarum and Zygosaccharomyces bailii.

1994

Killer toxin-secreting strains of the yeasts Hanseniaspora uvarum and Zygosaccharomyces bailii were shown to contain linear double-stranded RNAs (dsRNAs) that persist within the cytoplasm of the infected host cell as encapsidated virus-like particles. In both yeasts, L- and M-dsRNAs were associated with 85-kDa major capsid protein, whereas the additional Z-dsRNA (2.8 kb), present only in the wild-type Z. bailii killer strain, was capsid protein, whereas the additional Z-dsRNA (2.8 kb), present only in the wild-type Z. bailii killer strain, was shown to be encapsidated by a 35-kDa coat protein. Although Northern (RNA) blot hybridizations indicated that L-dsRNA from Z. bailii is a LA species,…

Zygosaccharomyces bailiivirusesImmunologySaccharomyces cerevisiaeSaccharomyces cerevisiaeBiologyHanseniasporaTransfectionMicrobiologyPeptide MappingMicrobiologyCapsidVirus-like particleVirologyYeastsRNA VirusesRNA Double-StrandedSequence Homology Amino AcidRNAMycotoxinsbiology.organism_classificationBlotting NorthernYeastPhenotypeCapsidInsect ScienceMycovirusRNA ViralResearch ArticleJournal of virology
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Acyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas spp.

2001

ABSTRACT A total of 137 soilborne and plant-associated bacterial strains belonging to different Pseudomonas species were tested for their ability to synthesize N -acyl-homoserine lactones (NAHL). Fifty-four strains synthesized NAHL. Interestingly, NAHL production appears to be more common among plant-associated than among soilborne Pseudomonas spp. Indeed, 40% of the analyzed Pseudomonas syringae strains produced NAHL which were identified most often as the short-chain NAHL, N -hexanoyl- l -homoserine lactone, N -(3-oxo-hexanoyl)-homoserine lactone, and N -(3-oxo-octanoyl)- l -homoserine lactone (no absolute correlation between genomospecies of P. syringae and their ability to produce NAHL …

[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyMESH: Sequence Analysis DNAMESH : Molecular Sequence DataMESH: PlantsMESH: Amino Acid SequenceErwiniaMESH: Base SequenceApplied Microbiology and Biotechnologychemistry.chemical_compoundPlant MicrobiologyMESH: Plant Diseases4-ButyrolactoneChromobacteriumPseudomonas syringaeMESH : Bacterial ProteinsMESH : DNA BacterialCloning MolecularMESH: Bacterial ProteinsComputingMilieux_MISCELLANEOUSSoil Microbiology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesMESH: Gene Expression Regulation BacterialMESH: Genetic Complementation TestEcologybiologyMESH : Amino Acid SequenceMESH : Plant DiseasesPseudomonasBacterialMESH : 4-ButyrolactonePlantsN-ACYL-HOMOSERINE LACTONE[SDV.EE] Life Sciences [q-bio]/Ecology environmentPseudomonadalesSequence AnalysisBiotechnologyPseudomonadaceaeMESH : Gene Expression Regulation BacterialDNA BacterialMESH : Cloning MolecularMESH : Soil MicrobiologyCarbon-Oxygen LyasesMolecular Sequence DataHomoserineMESH : PlantsMicrobiologyMESH: Carbon-Oxygen Lyases03 medical and health sciencesBacterial ProteinsPseudomonas[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMESH: Cloning MolecularAmino Acid SequenceMESH : Carbon-Oxygen Lyases030304 developmental biologyPlant DiseasesMESH: Molecular Sequence DataMESH : Genetic Complementation TestBase Sequence030306 microbiologyPantoeaGenetic Complementation TestMolecularMESH: PseudomonasGene Expression Regulation BacterialSequence Analysis DNADNAbiology.organism_classificationMESH: DNA BacterialchemistryGene Expression RegulationMESH: Soil MicrobiologyMESH: 4-ButyrolactoneMESH : Base SequenceFood ScienceMESH : PseudomonasMESH : Sequence Analysis DNACloning
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