Search results for " DOM"

Evolutionary plasticity of SH3 domain binding by Nef proteins of the HIV-1/SIVcpz lentiviral lineage

2021

ABSTRACTThe accessory protein Nef of human and simian immunodeficiency viruses (HIV and SIV) is an important pathogenicity factor known to interact with cellular protein kinases and other signaling proteins. A canonical SH3 domain binding motif in Nef is required for most of these interactions. For example, HIV-1 Nef activates the tyrosine kinase Hck by tightly binding to its SH3 domain. An archetypal contact between a negatively charged SH3 residue and a highly conserved arginine in Nef (Arg77) plays a key role here. Combining structural analyses with functional assays, we here show that Nef proteins have also developed a distinct structural strategy - termed the “R-clamp” - that favors th…

A Major Effect Gene Controlling Development and Pathogenicity in Botrytis cinerea Identified Through Genetic Analysis of Natural Mycelial Non-pathoge…

2021

Botrytis cinerea is a necrotrophic plant pathogenic fungus with a wide host range. Its natural populations are phenotypically and genetically very diverse. A survey of B. cinerea isolates causing gray mold in the vineyards of Castilla y León, Spain, was carried out and as a result eight non-pathogenic natural variants were identified. Phenotypically these isolates belong to two groups. The first group consists of seven isolates displaying a characteristic mycelial morphotype, which do not sporulate and is unable to produce sclerotia. The second group includes one isolate, which sporulates profusely and does not produce sclerotia. All of them are unresponsive to light. Crosses between a repr…

New point mutation (R243W) in the hormone binding domain of the c‐erbA β1 gene in a family with generalized resistance to thyroid hormone

1996

Two years after the first mutation on exon 7 in the carboxy-terminal part of the hinge domain (D) was reported (Behr and Loos 1992), we have identified the second mutation on exon 7 in patients with GRTH. Interestingly, our mutation it is not located in the two previously described "hot spot regions", but instead very close to the hinge domain (D) of the receptor protein that is essential for the function of the hormone binding domain (E) (Lin et al., 1991). Confirming the observation that the majority of single base substitutions causing human genetic diseases or DNA polymorphisms follow the hot spot mutation rule of CG to TG and CG to CA transition (Barker et al., 1984), an additional CpG…

Redox regulation of genome stability by effects on gene expression, epigenetic pathways and DNA damage/repair

2015

Reactive oxygen and nitrogen species (e.g. H2O2, nitric oxide) confer redox regulation of essential cellular signaling pathways such as cell differentiation, proliferation, migration and apoptosis. In addition, classical regulation of gene expression or activity, including gene transcription to RNA followed by translation to the protein level, by transcription factors (e.g. NF-κB, HIF-1α) and mRNA binding proteins (e.g. GAPDH, HuR) is subject to redox regulation. This review will give an update of recent discoveries in this field, and specifically highlight the impact of reactive oxygen and nitrogen species on DNA repair systems that contribute to genomic stability. Emphasis will be placed …

The isoperimetric inequality and the geodesic spheres. Some geometric consequences

1986

Exploratory spatial data analysis of the distribution of regional per capita GDP in Europe, 1980-1995

2000

The aim of this paper is to study the dynamics of European regional per capita product over time and space. This purpose is achieved by using the recently developed methods of Exploratory Spatial Data Analysis. Using a sample of European regions over the 1980-1995 period, we find strong evidence of global and local spatial autocorrelation in per capita GDP throughout the period. The detection of clusters of high and low per capita products during the period is an indication of the persistence of spatial disparities between European regions. This analysis is finally refined by the investigation of the spatial pattern of regional growth. Key words:exploratory spatial data analysis; distributi…

Effects of Biochar Addition on Rill Flow Resistance

2021

The development of rills on a hillslope whose soil is amended by biochar remains a topic to be developed. A theoretical rill flow resistance equation, obtained by the integration of a power velocity distribution, was assessed using available measurements at plot scale with a biochar added soil. The biochar was incorporated and mixed with the arable soil using a biochar content BC of 6 and 12 kg m−2. The developed analysis demonstrated that an accurate estimate of the velocity profile parameter Гv can be obtained by the proposed power equation using an exponent e of the Reynolds number which decreases for increasing BC values. This result pointed out that the increase of biochar content dump…

Application of Geostatistical Tools to the Geochemical Characterization of the Peloritani Mts (Sicily, Italy) Aquifers

2021

Sources of groundwater contaminants in inhabited areas, located in complex geo-tectonic contexts, are often deeply interlocked, thus, making the discrimination between anthropic and natural origins difficult. In this study, we investigate the Peloritani Mountain aquifers (Sicily, Italy), using the combination of probability plots with concentration contour maps to retrieve an overall view of the groundwater geo-chemistry with a special focus on the flux of heavy metals. In particular, we present a methodology for integrating spatial data with very different levels of precision, acquired before and during the “geomatic era”. Our results depict a complex geochemical layout driven by a geo-puz…

The influence of geography on the spatial agglomeration of production in the European Union

2012

Abstract We investigate the relative impact of geographic features on the location of production in the European Union. Specifically, we attempt to quantify how much of the spatial pattern of GDP can be attributed to exogenous first-nature elements alone and how much can be derived from endogenous second-nature factors. In order to disentangle both effects empirically, we control for second-nature factors. A method based on the decomposition of the per capita GDP variance is applied to a panel of 1,171 European NUTS 3 regions for 2006. We demonstrate that variable and model misspecifications may bias results unless proper allowance is made for spatial autocorrelation and spatial heterogenei…

Il setting della ricerca-azione: quadro epistemologico, riflessività e analisi della domanda

2009

Setting of Action Research - The paper is focused on the relationship between theoretical and interventions of actionresearch in community psychology. The authors analyzed some action-researches applying the commitment question analisys model. Keywords: community, participation, question analisys