Search results for " Local"
showing 10 items of 2101 documents
Genome-wide characterization of local cattle breeds from central and western Mediterranean
2017
Following-up on previous studies that investigated genetic relationships among several world-wide cattle breeds using genome-wide SNP data, we focus here on the central and western part of the Mediterranean. Notably, 50K genotypes from 30 Marismeña (Spain); 24 Guelmoise (Algeria); 46 Brune de l’Atlas Fauve, 15 Brune de l’Atlas Grise, and 15 Blonde du Cap (Tunisia); 29 Modicana and 30 Cinisara (Sicily); 24 Podolica Italiana (Southern continental Italy); 34 Chianina and 24 Romagnola (Central Italy); 23 Modenese, 24 Reggiana, 23 Alpine Grey and 50 Pezzata Rossa Italiana (Northern Italy); 50 Bruna Italiana and 50 Frisona Italiana were considered. When included in a world-wide dataset, the three…
High-density single nucleotide polymorphism markers reveal the population structure of 2 local chicken genetic resources
2023
Italy counts a large number of local chicken populations, some without a recognized genetic structure, such as Val Platani (VPL) and Cornuta (COS), which represent noteworthy local genetic resources. In this study, the genotype data of 34 COS and 42 VPL, obtained with the Affymetrix Axiom600KChicken Genotyping Array, were used with the aim to investigate the genetic diversity, the runs of homozygosity (ROH) pattern, as well as the population structure and relationship within the framework of other local Italian and commercial chickens. The genetic diversity indices, estimated using different approaches, displayed moderate levels of genetic diversity in both populations. The identified ROH h…
Detection of genomic signatures of selection in the North African Brune de l’Atlas cattle
2018
The identification of signatures of selection in indigenous livestock genome is able to elucidate the adaptive mechanisms allowing them to cope with environmental pressures. In the present study, we used genotyping data from 106 Brune de l’Atlas cattle individuals and tests based on the extent of haplotype homozygosity (EHH) to look for footprints of natural selection. We identified 17 genomic regions displaying strong signal of selection (p-value <10-6) overlapping with previously described QTL regions affecting many traits such as meat and milk composition, tuberculosis susceptibility, tick and mastitis resistance. Some of these highly significant candidate regions overlap with four previ…
Comparing quality characteristics of “Caciocavallo Palermitano” cheese from traditional and intensive production systems
2009
The “Caciocavallo Palermitano” is a typical stretched curd (pasta filata) cheese, made mainly in the Palermo area, in the Western Sicily, from cow milk. The aim of this investigation was to verify the influence of the on-farm production system (traditional vs. intensive) on some qualitative characteristics of “Caciocavallo Palermitano” cheese, with particular regard to fatty acid (FA) profile. On June 2008, 1-month aged cheeses were sampled from 6 traditional farms (TRD) and 5 intensive farms (INT). In TRD farms, local cow breeds (Cinisara, Modicana or Siciliana) were fed pasture-based diet and cheeses were manufactured using artisanal wood tools by following the traditional technique. The …
On the occurrence and distribution of Calanipeda aquaedulcis Kritschagin, 1873 (Copepoda, Calanoida, Pseudodiaptomidae) in Sicily, Italy, with some n…
2019
The only population of the pseudodiaptomid copepod Calanipeda aquaedulcis Kritschagin, 1873 to date reported to occur in Sicily disappeared at the beginning of the XXI century due to deep environmental changes which affected the single site (Lake Biviere di Gela) known for this species on the island. In that site C. aquaedulcis is now replaced by Copidodiaptomus numidicus (Gurney, 1909), a diaptomid copepod whose distribution has been greatly increasing since the second half of the last century. In the present note, the occurrence of C. aquaedulcis in 12 novel water bodies spread throughout Sicily is reported, and some environmental data on the sites where the species was collected are prov…
Metilazione del DNA in artrite reumatoide
2005
Lo stato di metilazione del DNA genomico e del gene PTHrP è stato valutato con tecniche molecolari e citogenetiche in artrite reumatoide (AR), patologia autoimmune caratterizzata anche da alta incidenza di linfomi e da ipercalcemia per overespressione del gene PTHrP. La metilazione del DNA, infatti, ha un ruolo critico nello sviluppo delle malattie neoplastiche; il gene PTHrP avendo tre promotori uno dei quali contiene un’isola CpG è un buon candidato per la deregolazione da alterato pattern di metilazione locale. Le indagini sulla metilazione genomica, condotte su DNA estratto da sangue periferico di pazienti e di donatori e amplificato in reazioni di Methylation-Sensitive Arbitrarily Prim…
PRIN Project 2010-11 “Active and recent geodynamics of Calabrian Arc and accretionary complex in the Ionian Sea”: new constraints from geological, ge…
2014
This contribution illustrates the preliminary results of our Research Unit in the PRIN Project 2010-11, which focuses on active and recent geodynamics of Calabrian Arc. The integration of the new geological, geodetic and seismological data supports the inferred recent plate boundary reorganization in the central-southern Mediterranean, where the regional GNNS velocity fields point to a deceleration or cessation of Calabrian Arc migration, and to extension along the axis of the Calabrian Arc, accommodated by normal faulting (e.g. Capo Vaticano and Messina Straits (Aloisi et al., 2012; Pepe et al., 2014; Spampinato et al., 2014). The study of the lateral borders of the Arc revealed that obliq…