Search results for " stability."
showing 10 items of 1315 documents
Changes in the 5?-untranslated region of the rbcL gene accelerate transcript degradation more than 50-fold in the chloroplast of Chlamydomonas reinha…
2003
Using uidA (beta-glucuronidase; GUS) reporter gene constructs, the 5'-untranslated region (UTR) of the Chlamydomonas chloroplast rbcL gene was screened by deletion and mutational analysis for the presence of a promoter element that previous studies implied to reside within the first 63 base pairs of the UTR. Deleting a large segment of the rbcL 5'UTR in a 3'--5' direction to position +36, changing the remaining 36 base pairs at the 5' end of the UTR, and increasing by five base pairs the distance between the rbcL 5'UTR and the basic promoter element located at position -10 did not abolish transcription from the basic rbcL promoter. It is concluded that the apparent loss of transcriptional a…
Nitric oxide increases the decay of matrix metalloproteinase 9 mRNA by inhibiting the expression of mRNA-stabilizing factor HuR.
2003
Dysregulation of extracellular matrix turnover is an important feature of many inflammatory processes. Rat renal mesangial cells express high levels of matrix metalloproteinase 9 (MMP-9) in response to inflammatory cytokines such as interleukin-1 beta. We demonstrate that NO does strongly destabilize MMP-9 mRNA, since different luciferase reporter gene constructs containing the MMP-9 3' untranslated region (UTR) displayed significant reduced luciferase activity in response to the presence of NO. Moreover, by use of an in vitro degradation assay we found that the cytoplasmic fractions of NO-treated cells contained a higher capacity to degrade MMP-9 transcripts than those obtained from contro…
Involvement of KSRP in the post-transcriptional regulation of human iNOS expression–complex interplay of KSRP with TTP and HuR
2005
We purified the KH-type splicing regulatory protein (KSRP) as a protein interacting with the 3'-untranslated region (3'-UTR) of the human inducible nitric oxide (iNOS) mRNA. Immunodepletion of KSRP enhanced iNOS 3'-UTR RNA stability in in vitro-degradation assays. In DLD-1 cells overexpressing KSRP cytokine-induced iNOS expression was markedly reduced. In accordance, downregulation of KSRP expression increases iNOS expression by stabilizing iNOS mRNA. Co-immunoprecipitations showed interaction of KSRP with the exosome and tristetraprolin (TTP). To analyze the role of KSRP binding to the 3'-UTR we studied iNOS expression in DLD-1 cells overexpressing a non-binding mutant of KSRP. In these ce…
Negative feedback regulation of the yeast CTH1 and CTH2 mRNA binding proteins is required for adaptation to iron deficiency and iron supplementation.
2013
Iron (Fe) is an essential element for all eukaryotic organisms because it functions as a cofactor in a wide range of biochemical processes. Cells have developed sophisticated mechanisms to tightly control Fe utilization in response to alterations in cellular demands and bioavailability. In response to Fe deficiency, the yeast Saccharomyces cerevisiae activates transcription of the CTH1 and CTH2 genes, which encode proteins that bind to AU-rich elements (AREs) within the 3′ untranslated regions (3′UTRs) of many mRNAs, leading to metabolic reprogramming of Fe-dependent pathways and decreased Fe storage. The precise mechanisms underlying Cth1 and Cth2 function and regulation are incompletely u…
Glyceraldehyde-3-phosphate dehydrogenase regulates endothelin-1 expression by a novel, redox-sensitive mechanism involving mRNA stability
2008
17 pages.-- PMID: 18809573 [PubMed].-- Printed version published on Dec 2008.
Myotonic dystrophy associated expanded CUG repeat muscleblind positive ribonuclear foci are not toxic to Drosophila
2005
Myotonic dystrophy type 1 is an autosomal dominant disorder associated with the expansion of a CTG repeat in the 3 0 untranslated region (UTR) of the DMPK gene. Recent data suggest that pathogenesis is predominantly mediated by a gain of function of the mutant transcript. In patients, these expanded CUG repeat-containing transcripts are sequestered into ribonuclear foci that also contain the muscleblind-like proteins. To provide further insights into muscleblind function and the pathogenesis of myotonic dystrophy, we generated Drosophila incorporating CTG repeats in the 3 0 -UTR of a reporter gene. As in patients, expanded CUG repeats form discrete ribonuclear foci in Drosophila muscle cell…
BIBO Stability Analysis for Delay Switched Systems with Nonlinear Perturbation
2013
Published version of a paper from the journal:Abstract and Applied Analysis. Also available from Hindawi:http://dx.doi.org/10.1155/2013/738653 The problem of bounded-input bounded-output ( BIBO) stability is investigated for a class of delay switched systems with mixed time-varying discrete and constant neutral delays and nonlinear perturbation. Based on the Lyapunov-Krasovskii functional theory, new BIBO stabilization criteria are established in terms of delay-dependent linear matrix inequalities. The numerical simulation is carried out to demonstrate the effectiveness of the results obtained in the paper.
Approximate analytic and numerical solutions to Lane-Emden equation via fuzzy modeling method
2012
Published version in the journal: Mathematical Problems in Engineering. Also available from the publisher: http://dx.doi.org/10.1155/2012/259494 A novel algorithm, called variable weight fuzzy marginal linearization VWFML method, is proposed. Thismethod can supply approximate analytic and numerical solutions to Lane-Emden equations. And it is easy to be implemented and extended for solving other nonlinear differential equations. Numerical examples are included to demonstrate the validity and applicability of the developed technique.
Robust synchronization and fault detection of uncertain master-slave systems with mixed time-varying delays and nonlinear perturbations
2011
Publiahed version of an article in the journal: International Journal of Control, Automation and Systems. Also available from the publisher on SpringerLink: http://dx.doi.org/10.1007/s12555-011-0408-8 In this paper, the problem of robust synchronization and fault detection for a class of master-slave systems subjected to some nonlinear perturbations and mixed neutral and discrete time-varying delays is investigated based on an H ∞ performance condition. By introducing a descriptor technique, using Lyapunov-Krasovskii functional and a suitable change of variables, new required sufficient conditions are established in terms of delay-dependent linear matrix inequalities to synthesize the resid…
Convective Roll Instabilities of Vertical Throughflow with Viscous Dissipation in a Horizontal Porous Layer
2009
Published version of an article from the journal: Transport in Porous Media. The original publication is available at Spingerlink. http://dx.doi.org/10.1007/s11242-009-9417-y The vertical throughflow with viscous dissipation in a horizontal porous layer is studied. The horizontal plane boundaries are assumed to be isothermal with unequal temperatures and bottom heating. A basic stationary solution of the governing equations with a uniform vertical velocity field (throughflow) is determined. The temperature field in the basic solution depends only on the vertical coordinate. Departures from the linear heat conduction profile are displayed by the temperature distribution due to the forced con…