Search results for "CLUSTER"
showing 10 items of 3640 documents
Construction of Disjoint Virtual Backbones for Wireless Sensor Networks
2020
A wireless sensor network is a wireless network of sensors aimed at monitoring physical events. It has ingratiated itself into almost all areas of human endeavors. Data dissemination in these networks is quite challenging and is generally accomplished by flooding. But flooding introduces broadcast storm problem due from implosion and overlap. To overcome this, topology management can prescribe a virtual backbone network to which routing is confined. In this paper we propose an algorithm that constructs multiple disjoint virtual backbone networks, using only nodes' locations. The disjointedness makes routing more robust and the network exploitation energy efficient. Simulations show our algo…
Coupled-cluster techniques for computational chemistry: The CFOUR program package
2020
An up-to-date overview of the CFOUR program system is given. After providing a brief outline of the evolution of the program since its inception in 1989, a comprehensive presentation is given of its well-known capabilities for high-level coupled-cluster theory and its application to molecular properties. Subsequent to this generally well-known background information, much of the remaining content focuses on lesser-known capabilities of CFOUR, most of which have become available to the public only recently or will become available in the near future. Each of these new features is illustrated by a representative example, with additional discussion targeted to educating users as to classes of …
Bacterial sensor kinases using Fe–S cluster binding PAS or GAF domains for O2sensing
2012
[4Fe-4S](2+) clusters are used by very diverse types of bacterial sensors for response to oxygen, including DNA-binding proteins of the CRP/FNR family and sensor kinases like NreB. In NreB the cluster is bound by an input domain of the PAS type. The [4Fe-4S](2+) cluster of NreB responds to O(2) by degradation to a [2Fe-2S](2+) cluster which is labile and decomposes. NreB constitutes together with AirS the NreB/AirS family of bacterial sensor kinases that contain PAS or GAF domains for binding of [4Fe-4S](2+) or [2Fe-2S](2+) clusters and oxygen sensing. The NreB/AirS family is related to the FixL sensor kinases that use hemeB binding PAS domains for oxygen sensing.
A statistical model for predicting the inter-annual variability of birch pollen abundance in Northern and North-Eastern Europe
2018
The paper suggests a methodology for predicting next-year seasonal pollen index (SPI, a sum of daily-mean pollen concentrations) over large regions and demonstrates its performance for birch in Northern and North-Eastern Europe. A statistical model is constructed using meteorological, geophysical and biological characteristics of the previous year). A cluster analysis of multi-annual data of European Aeroallergen Network (EAN) revealed several large regions in Europe, where the observed SPI exhibits similar patterns of the multi-annual variability. We built the model for the northern cluster of stations, which covers Finland, Sweden, Baltic States, part of Belarus, and, probably, Russia and…
A gene transfer agent and a dynamic repertoire of secretion systems hold the keys to the explosive radiation of the emerging pathogen Bartonella
2013
Gene transfer agents (GTAs) randomly transfer short fragments of a bacterial genome. A novel putative GTA was recently discovered in the mouse-infecting bacterium Bartonella grahamii. Although GTAs are widespread in phylogenetically diverse bacteria, their role in evolution is largely unknown. Here, we present a comparative analysis of 16 Bartonella genomes ranging from 1.4 to 2.6 Mb in size, including six novel genomes from Bartonella isolated from a cow, two moose, two dogs, and a kangaroo. A phylogenetic tree inferred from 428 orthologous core genes indicates that the deadly human pathogen B. bacilliformis is related to the ruminant-adapted clade, rather than being the earliest diverging…
Predictions forNDK,K̄DNandNDD̄molecules
2012
In this work baryon systems made of three hadrons which contain one nucleon and one D meson, and in addition another meson, , K or , are investigated using the Fixed Center Approximation to the Faddeev equations. In this work we use Λc(2595), X(3700) and D*s0(2317) bound states as a cluster and a third particle scattering form that clusters. In all cases we find bound states and quasibound states.
Acid–Base Properties and Surface Charge Distribution of the Water-Soluble Au102(pMBA)44 Nanocluster
2016
The pKa of the p-mercaptobenzoic acid (pMBA) ligands in the Au102(pMBA)44 nanocluster was measured by using acid–base and IR titration. The observed macroscopic pKa = 6.18 ± 0.05 is significantly more basic than that of free pMBA (pKa = 4.16), and the protonation behavior is anticooperative according to the Hill coefficient n = 0.64 ± 0.04. The cluster is truly water-soluble when more than 22 and insoluble when fewer than 7 ligands are in the deprotonated state. In order to obtain more insight into the anticooperative character, the cluster was modeled at pH ∼6.2 using constant pH molecular dynamics simulations. The pKa values of the individual pMBAs are in the range of 5.18–7.58, depending…
Mitochondrial DNA Regionalism and Historical Demography in the Extant Populations of Chirocephalus kerkyrensis (Branchiopoda: Anostraca)
2012
BackgroundMediterranean temporary water bodies are important reservoirs of biodiversity and host a unique assemblage of diapausing aquatic invertebrates. These environments are currently vanishing because of increasing human pressure. Chirocephalus kerkyrensis is a fairy shrimp typical of temporary water bodies in Mediterranean plain forests and has undergone a substantial decline in number of populations in recent years due to habitat loss. We assessed patterns of genetic connectivity and phylogeographic history in the seven extant populations of the species from Albania, Corfu Is. (Greece), Southern and Central Italy.Methodology/principal findingsWe analyzed sequence variation at two mito…
The accuracy of molecular dipole moments in standard electronic structure calculations
2000
Abstract A systematic investigation has been carried out of the accuracy of calculated molecular equilibrium dipole moments of 11 polar closed-shell molecules, using the HF, MP2, CCSD and CCSD(T) models and correlation-consistent basis sets. Augmented basis sets are important for improving the basis-set convergence, but the quality of the results depends more on the correlation treatment than on the cardinal number of the basis set. Augmented triple-zeta basis sets are sufficient for most calculations. The mean absolute error of the HF calculations is 0.16 D, which is reduced at the MP2 and CCSD levels to 0.048 and 0.025 D, respectively. The CCSD(T) errors are small – typically
Medical news aggregation and ranking of taking into account the user needs
2019
The purpose of this work is to develop an intelligent information system that is designed for aggregation and ranking of news taking into account the needs of the user. The online market for mass media and the needs of readers, the purpose of their searches and moments is not enough to find the news is analyzed. A conceptual model of the information aggression system and ranking of news that would enable presentation of the work of the future intellectual information system, to show its structure is constructed. The methods and means for implementation of the intellectual information system are selected. An online resource for aggregation and ranking of news, news feeds and flexible setting…