Search results for "Clad"
showing 10 items of 495 documents
Mbandakamine-Type Naphthylisoquinoline Dimers and Related Alkaloids from the Central African Liana Ancistrocladus ealaensis with Antiparasitic and An…
2018
Four new dimeric naphthylisoquinoline alkaloids, michellamine A5 (2) and mbandakamines C–E (4–6), were isolated from the Congolese plant Ancistrocladus ealaensis, along with the known dimer mbandakamine A (3). They represent constitutionally unsymmetric dimers, each consisting of two 5,8′-coupled naphthylisoquinoline monomers. While the molecular halves of michellamine A5 (2) are linked via C-6′ of both of the naphthalene moieties, i.e., via the least-hindered positions, so that the central biaryl axis is configurationally unstable and not an additional element of chirality, the mbandakamines 3–6 possess three consecutive stereogenic axes. Their monomeric units are linked through an unprece…
A new Alokistocaridae Resser, 1939 (Trilobita) from the middle Cambrian of Spain
2012
A new trilobite species, Schopfaspis? graciai, from the middle Cambrian of Spain is the first member of Alokistocaridae reported from west Gondwana. A cladistic analysis of this trilobite and other Gondwanan trilobites of possible alokistocarid affinities (Schopfaspis granulosa, Chelidonocephalus anatolicus, Derikaspis toluni, Kounamkites multiformis) suggests that this family can be divided into two subfamilies: Alokistocarinae and Altiocculinae. Schopfaspis? graciai nov. sp. and Schopfaspis granulosa are assigned to the subfamily Altiocculinae laying in a more basal position than Altiocculus species. The cladistic analysis also demonstrates a possible relationship of Chelidonocephalus ana…
Characterisation and detection of spoilage mould responsible for black spot in dry-cured fermented sausages.
2015
Moulds responsible for black spot spoilage of dry-cured fermented sausages were characterised. For this purpose, samples were taken from those dry-cured fermented sausages which showed black spot alteration. Most of the mould strains were first tentatively identified as Penicillium spp. due to their morphological characteristics in different culture conditions, with one strain as Cladosporium sp. The Cladosporium strain was the only one which provoked blackening in culture media. This strain was further characterised by sequencing of ITS1-5.8S-ITS2 rRNA and β-tubulin genes. This mould strain was able to reproduce black spot formation in dry-cured fermented sausage 'salchichon' throughout th…
Are homalozoans echinoderms? An answer from the extraxial-axial theory
2000
Homalozoans include four classes of non-pentamerous Paleozoic echinoderms: Homostelea (cinctans), Ctenocystoidea (ctenoid-bearing homalozoans), Homoiostelea (solutes), and Stylophora (cornutes and mitrates). Their atypical morphologies have historically made it difficult to relate them to other classes. Therefore, their systematic positions have been represented by two hypotheses (H): as stem taxa to echinoderms (H1) or as stem taxa to chordates (H2). These conclusions rest on previous inability to recognize synapomorphies with more crownward echinoderms, resulting in a forcing of the homalozoans down the phylogenetic tree that is more artifactual than evolutionary. The Extraxial-Axial Theo…
18S rDNA phylogeny and evolution of cap development in Polyphysaceae (formerly Acetabulariaceae; Dasycladales, Chlorophyta)
2003
Abstract Cells of the members of the Dasycladales have a unique body plan well known from fossils. They persist today in 38 recognized species. This study investigates in detail the development of reproductive structures in 17 Polyphysaceae (= Acetabulariaceae) species and provides a molecular phylogenetic analysis of 18S ribosomal DNA sequence data of 23 species of the order Dasycladales, including 17 of the 19 extant members of the family Polyphysaceae. Reproductive cap development is documented by scanning electron microscopy in 17 species, by histological sections in five species, and by growth measurements. Other morphometric data are also provided for most species. Bayesian analysis o…
One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads.
2020
Mapping of high-throughput sequencing (HTS) reads to a single arbitrary reference genome is a frequently used approach in microbial genomics. However, the choice of a reference may represent a source of errors that may affect subsequent analyses such as the detection of single nucleotide polymorphisms (SNPs) and phylogenetic inference. In this work, we evaluated the effect of reference choice on short-read sequence data from five clinically and epidemiologically relevant bacteria (Klebsiella pneumoniae, Legionella pneumophila, Neisseria gonorrhoeae, Pseudomonas aeruginosa and Serratia marcescens). Publicly available whole-genome assemblies encompassing the genomic diversity of these species…
Evolutionary history of treecreeper vocalisations (Aves: Certhia)☆
2008
AbstractSince the vocalisations of passerine birds are in general a good means to separate taxa when external morphological differences are few, song and call recordings of 33 treecreeper (Certhia) taxa were sonagraphed and their parameters analysed. The vocalisations show low intra-individual and intra-population variation. Phylogenetic evolutionary units at the population level were delimited by time, frequency and syntax parameters by means of principal-component and discriminant analyses. Traits of territorial song were traced on a phylogenetic tree based on cytochrome b sequences, and a mean acoustic character difference was calculated. All presently recognised nine species could be di…
Remarks on biology, vocalisations and systematics of Urocynchramus pylzowi Przewalski (Aves, Passeriformes)
2006
Several field studies in the Qinghai Nanshan area (Qinghai Province, China) have added new findings to the scant knowledge about Przewalski´s Rosefinch Urocynchramus pylzowi Przewalski, 1876. The hitherto completely unknown vocalisations are described and used to clarify systematic relationships. Although one could argue for a relationship to Uragus sibiricus (Pallas), based on nearly identical auditory impression and sonagram structures of their songs, detailed measurements show significant differences in time and frequency parameters. Moreover a mtDNA analysis shows no close phylogenetic relationship to either of three major emberizid clades. These results support the hypothesis that Uroc…
Evolutionary transitions in broad tapeworms (Cestoda: Diphyllobothriidea) revealed by mitogenome and nuclear ribosomal operon phylogenetics
2021
Abstract Broad tapeworms (Diphyllobothriidea) are parasites whose adults are capable of infecting a wide range of freshwater, marine and terrestrial tetrapods including humans. Previous works examining the evolution of habitat and host use in this group have been hampered by the lack of a well-resolved phylogeny. In order to produce a robust phylogenetic framework for diphyllobothriideans, we sequenced the complete mitochondrial genome of 13 representatives, carefully chosen to cover the major clades, and two outgroup species representing the Spathebothriidea and Haplobothriidea. In addition, complementary data from the nuclear ribosomal operon was sequenced for 10 representative taxa. Mito…
Revision of the genus Trogulus Latreille: the Trogulus coriziformis species-group of the western Mediterranean (Opiliones:Trogulidae)
2008
Within the well researched European fauna of harvestmen, the genus Trogulus Latreille exhibits unexpectedly high cryptic diversity. The species’ uniform morphology hinders an exclusively morphological approach to their systematics and taxonomy, and a preliminary molecular study estimated the number of species to be three times higher than currently known. The current study focuses on a clearly defined species-group within Trogulus, combining molecular (~1700 bp 28S rRNA and the cytochrome b gene), distributional, morphometric and morphological data. Relationships are reconstructed using Bayesian inference, maximum parsimony and maximum likelihood and this information is subsequently used t…