Search results for "Photoreceptor"

showing 10 items of 143 documents

Optogenetic Control of Bacterial Expression by Red Light

2022

In optogenetics, as in nature, sensory photoreceptors serve to control cellular processes by light. Bacteriophytochrome (BphP) photoreceptors sense red and far-red light via a biliverdin chromophore and, in response, cycle between the spectroscopically, structurally, and functionally distinct Pr and Pfr states. BphPs commonly belong to two-component systems that control the phosphorylation of cognate response regulators and downstream gene expression through histidine kinase modules. We recently demonstrated that the paradigm BphP from Deinococcus radiodurans exclusively acts as a phosphatase but that its photosensory module can control the histidine kinase activity of homologous receptors.…

HistoryfytokromitSIGNALING MECHANISMHistidine KinaseLightPolymers and PlasticsBiomedical EngineeringHISTIDINE KINASESfotobiologiasensory photoreceptorBiochemistry Genetics and Molecular Biology (miscellaneous)Industrial and Manufacturing EngineeringbakteeritOPTICAL CONTROLgeeniekspressioBusiness and International ManagementoptogeneticsHEME OXYGENASEGENE-EXPRESSIONphytochromeoptogenetiikkaPHOTORECEPTORSBacteriaBiliverdineREARRANGEMENTSBACTERIOPHYTOCHROMESGeneral MedicinePhosphoric Monoester HydrolasesOptogeneticsreseptorit (biokemia)two-component systemESCHERICHIA-COLIgene expression1182 Biochemistry cell and molecular biology3111 BiomedicinePhytochromevalosignal transductionSSRN Electronic Journal
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Theoretical study of spiropyran-merocyanine thermal isomerization.

2004

Abstract Quantum mechanical computations at DFT level were carried out on the processes involved in the thermal reaction SP ⇆ ME, where SP is the nitro-substituted spirobenzopyran (1 ′ ,3 ′ -dihydro-1 ′ ,3 ′ ,3 ′ -trimethyl-6-nitro-spiro[2H-1-benzopyran-2,2 ′ - [2H]indole]) in the closed form and ME is the corresponding open form. A detailed theoretical description of the overall reaction is reported along with the thermodynamic parameters for all intermediates and transition states. The obtained activation energy value is in agreement with the available experimental data in solution.

Indole testSpiropyranGeneral Physics and AstronomyActivation energyTransition statechemistry.chemical_compoundphotoreceptor ab initio calculations free energychemistryComputational chemistryThermalMerocyaninePhysical and Theoretical ChemistryQuantumIsomerization
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Indoor artificial lighting: Prediction of the circadian effects of different spectral power distributions.

2014

The study presented in this paper aims to evaluate if and how the environment affects the circadian impact of a light source by predicting circadian stimulus (CS) resulting from the exposure to different light scenes, using equations reported in studies by Rea et al. The main findings are: (1) Above 600 lx at eye level the increase of CS is little; (2) Between 50 lx and 200 lx at the eye level an increase of only 50 lx determines a significant increase of CS; (3) Light sources with correlated colour temperatures between 2900 K and 4200 K have similar impacts on the circadian system according to the calculation method used; (4) Even an almost neutral environment affects the circadian impact…

Light sourceArtificial lightcircadian stimulus spectral power distribution circadian systemComputer scienceMELATONIN CLOCK PHOTOTRANSDUCTION PHOTORECEPTORS MELANOPSIN RHYTHMS HUMANS ROD circadian effects SPDs light sources non visual effectsAcousticsCircadian rhythmElectrical and Electronic EngineeringStimulus (physiology)RETINAL GANGLION-CELLS SYSTEMElectrical and Electronic Engineering circadian rhythmSimulation
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Excitation-Wavelength-Dependent Photocycle Initiation Dynamics Resolve Heterogeneity in the Photoactive Yellow Protein from Halorhodospira halophila

2018

Photoactive yellow proteins (PYPs) make up a diverse class of blue-light-absorbing bacterial photoreceptors. Electronic excitation of the p-coumaric acid chromophore covalently bound within PYP results in triphasic quenching kinetics; however, the molecular basis of this behavior remains unresolved. Here we explore this question by examining the excitation-wavelength dependence of the photodynamics of the PYP from Halorhodospira halophila via a combined experimental and computational approach. The fluorescence quantum yield, steady-state fluorescence emission maximum, and cryotrapping spectra are demonstrated to depend on excitation wavelength. We also compare the femtosecond photodynamics …

LightKineticsQuantum yieldMolecular Dynamics Simulation010402 general chemistryPhotochemistryPhotoreceptors Microbial01 natural sciencesBiochemistry/dk/atira/pure/sustainabledevelopmentgoals/life_below_waterStructure-Activity RelationshipBacterial Proteins0103 physical sciencesSDG 14 - Life Below Waterta116Photoactive Yellow ProteinsQuenching (fluorescence)ta114010304 chemical physicsChemistryHalorhodospira halophilaHydrogen BondingChromophoreFluorescence0104 chemical sciencesHalorhodospira halophilaFemtosecondExcitationBiochemistry
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Analysis of the human a-wave ERG component

2006

The a-wave is one of the main issues of research in the field of ocular electrophysiology, since it is strictly connected with early photoreceptoral activities. The present study proposes mathematical methods that analyse this component in human subjects, and supports experimental evidence relating to possible correlations among the responses of photoreceptoral units under a light stimulus. The investigation is organized in two parts: the first part concerns the onset and the initial slope, up to the first minimum (about 10-15 ms), the second part deals with the main portion of the wave, up to about 30 ms. In both cases, the a-waves, recorded at various levels of luminance, have been fitted…

LightPhysiologyBiomedical EngineeringBiophysicsStimulus (physiology)Radiation DosageModels BiologicalLuminanceRetinaNight blindness RetinaPhysiology (medical)ElectroretinographyHumansComputer SimulationPhotoreceptor CellsDiagnosis Computer-AssistedMathematicsDose-Response Relationship Drugbusiness.industryStochastic processPattern recognitionSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Artificial intelligencebusinessAlgorithmsPhotic StimulationPhysiological Measurement
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Calcium-Dependent Assembly of Centrin-G-Protein Complex in Photoreceptor Cells

2002

Photoexcitation of rhodopsin activates a heterotrimeric G-protein cascade leading to cyclic GMP hydrolysis in vertebrate photoreceptors. Light-induced exchanges of the visual G-protein transducin between the outer and inner segment of rod photoreceptors occur through the narrow connecting cilium. Here we demonstrate that transducin colocalizes with the Ca(2+)-binding protein centrin 1 in a specific domain of this cilium. Coimmunoprecipitation, centrifugation, centrin overlay, size exclusion chromatography, and kinetic light-scattering experiments indicate that Ca(2+)-activated centrin 1 binds with high affinity and specificity to transducin. The assembly of centrin-G-protein complex is medi…

Lightgenetic structuresChromosomal Proteins Non-HistoneMacromolecular SubstancesImmunoprecipitationG proteinCentrifugationPlasma protein bindingBiologyRetinaSubstrate SpecificityRats Sprague-DawleyMiceHeterotrimeric G proteinCalcium-binding proteinAnimalsScattering RadiationTransducinMicroscopy ImmunoelectronCell Growth and DevelopmentMolecular BiologyCalcium-Binding ProteinsCell BiologyHeterotrimeric GTP-Binding ProteinsPrecipitin TestsRatsCell biologyMice Inbred C57BLMolecular WeightRhodopsinCentrinChromatography Gelbiology.proteinCalciumCattlesense organsTransducinPhotoreceptor Cells VertebrateProtein BindingSignal TransductionMolecular and Cellular Biology
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Photoreceptors, lightness constancy and color vision.

1986

LightnessColor constancyLightbusiness.industryColor visionColour VisionGeneral MedicineCone (formal languages)FluorescenceOpticsHumansPhotoreceptor CellsScotopic visionbusinessEcology Evolution Behavior and SystematicsColor PerceptionLightingMathematicsDie Naturwissenschaften
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Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome

2018

Phytochromes are red-light photoreceptors that were first characterized in plants, with homologs in photosynthetic and non-photosynthetic bacteria known as bacteriophytochromes (BphPs). Upon absorption of light, BphPs interconvert between two states denoted Pr and Pfr with distinct absorption spectra in the red and far-red. They have recently been engineered as enzymatic photoswitches for fluorescent-marker applications in non-invasive tissue imaging of mammals. This article presents cryo- and room-temperature crystal structures of the unusual phytochrome from the non-photosynthetic myxobacterium Stigmatella aurantiaca (SaBphP1) and reveals its role in the fruiting-body formation of this ph…

MODULE0301 basic medicinePHOTOACTIVE YELLOW PROTEINSIGNALING MECHANISMabsorption spectraMutantfotobiologiaphytochromesBiochemistryyhteyttäminenbakteeritSTIGMATELLA-AURANTIACA03 medical and health sciencesFRUITING BODY FORMATIONGeneral Materials ScienceMolecular replacementStigmatella aurantiacalcsh:ScienceUNUSUAL BACTERIOPHYTOCHROMEPHOTOCONVERSIONHistidine030102 biochemistry & molecular biologybiologyPhytochromeChemistryCRYSTALLOGRAPHYta1182photosynthetic bacteriaphotoreceptorsGeneral ChemistryChromophoreCondensed Matter Physicsbiology.organism_classification030104 developmental biologyCHROMOPHORE-BINDING DOMAINBiophysicsmyxobacterialcsh:Q3111 BiomedicinePhotosynthetic bacteriaproteiinitMOLECULAR REPLACEMENTBinding domainIUCrJ
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Rod-cone based color vision in seals under photopic conditions

2016

Marine mammals have lost the ability to express S-cone opsin, and possess only one type of M/L-cone in addition to numerous rods. As they are cone monochromats they should be color blind. However, early behavioral experiments with fur seals and sea lions indicated discrimination ability between many shades of grey and blue or green. On the other hand, most recent training experiments with harbor seals under "mesopic" conditions demonstrated rod based color blindness (Scholtyssek et al., 2015). In our experiments we trained two harbor seals (Phoca vitulina) and two South African fur seals (Arctocephalus pusillus) with surface colors under photopic conditions. The seals had to detect a triang…

Male0301 basic medicineBrightnessMesopic visionColor visionmedia_common.quotation_subjectPhocaLuminancePhocaContrast Sensitivity03 medical and health sciences0302 clinical medicineOpticsAnimalsContrast (vision)Mathematicsmedia_commonColor Visionbiologybusiness.industryFur Sealsbiology.organism_classificationSensory SystemsOphthalmology030104 developmental biologySensory ThresholdsHarbor sealFemalebusiness030217 neurology & neurosurgeryPhotoreceptor Cells VertebratePhotopic visionVision Research
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Melanocortin receptor agonists MCR1-5protect photoreceptors from high-glucose damage and restore antioxidant enzymes in primary retinal cell culture

2016

Retinal photoreceptors are particularly vulnerable to local high-glucose concentrations. Oxidative stress is a risk factor for diabetic retinopathy development. Melanocortin receptors represent a family of G-protein-coupled receptors classified in five subtypes and are expressed in retina. Our previous data indicate that subtypes 1 and 5 receptor agonists exert a protective role on experimental diabetic retinopathy. This study focuses on their role in primary retinal cell cultures in high-glucose concentrations. After eye enucleation from wild-type male C57BL/6 mice, retinal cells were isolated, plated in high-glucose concentration and treated with melanocortin receptors 1 and 5 agonists an…

Male0301 basic medicineOpsinmedicine.medical_specialtyChemokineBlotting WesternPrimary Cell CultureEnzyme-Linked Immunosorbent AssayBiologyNeuroprotection03 medical and health scienceschemistry.chemical_compound0302 clinical medicineMelanocortin receptorInternal medicinemedicineReceptoroxidative streGlutathione PeroxidaseRetinaStaining and LabelingAnimalSuperoxide DismutaseReceptors Melanocortinmelanocortin receptor agonistRetinalCell BiologyphotoreceptorImmunohistochemistryNeuroprotectionprimary retinal cell cultureMice Inbred C57BLGlucoseOpsin030104 developmental biologymedicine.anatomical_structureEndocrinologyGene Expression Regulationchemistrybiology.proteinMolecular MedicineAntioxidantMelanocortinhyperglycaemia030217 neurology & neurosurgeryPhotoreceptor Cells VertebrateJournal of Cellular and Molecular Medicine
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