Search results for "Transcription factors"

showing 10 items of 848 documents

Molecular cloning and expression of Tenebrio molitor ultraspiracle during metamorphosis and in vivo induction of its phosphorylation by 20-hydroxyecd…

2000

Using a RT-PCR approach, the Tenebrio molitor homologue of Drosophila Ultraspiracle (TmUSP) was characterized. Its DNA binding domain shows a degree of identity with those of the other insect USPs. However, the ligand binding domain is closer to those of retinoid X receptors. Using an antibody raised against DmUSP, Western blot analysis of proteins from epidermis and other tissues revealed five immunoreactive bands, corresponding to different phosphorylated forms of a unique polypeptide, as shown by lambda-phosphatase treatment. The nuclear form of TmUSP seems unphosphorylated. An in vivo 20-hydroxyecdysone treatment increases considerably and rapidly the phosphorylated forms of TmUSP. This…

DNA ComplementaryMolecular Sequence Data20-HydroxyecdysoneGene ExpressionMolecular cloningBiologychemistry.chemical_compoundWestern blotGene expressionGeneticsmedicineAnimalsDrosophila ProteinsHumansProtein IsoformsAmino Acid SequenceRNA MessengerCloning MolecularPhosphorylationReceptorTenebrioMolecular BiologyEpidermis (botany)medicine.diagnostic_testMetamorphosis BiologicalDNA-binding domainSequence Analysis DNAMolecular biologyCell biologyDNA-Binding ProteinsEcdysteronechemistryInsect SciencePhosphorylationEpidermisTranscription FactorsInsect molecular biology
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Retinoid X receptor and retinoic acid response in the marine sponge Suberites domuncula

2003

SUMMARY To date no nuclear receptors have been identified or cloned from the phylogenetically oldest metazoan phylum, the Porifera (sponges). We show that retinoic acid causes tissue regression in intact individuals of the demosponge Suberites domuncula and in primmorphs, special three-dimensional cell aggregates. Primmorphs were cultivated on a galectin/poly-L-lysine matrix in order to induce canal formation. In the presence of 1 or 50 μmol l–1 retinoic acid these canals undergo regression, a process that is reversible. We also cloned the cDNA from S. domunculaencoding the retinoid X receptor (RXR), which displays the two motifs of nuclear hormone receptors, the ligand-binding and the DNA-…

DNA ComplementaryRetinoid X receptor; Suberites domuncula; marine spongesCroatiaReceptors Retinoic AcidPhysiologyMolecular Sequence DataRetinoic acidGene ExpressionApoptosisEnzyme-Linked Immunosorbent AssayTretinoinRetinoic acid receptor betaAquatic ScienceRetinoic acid-inducible orphan G protein-coupled receptorchemistry.chemical_compoundAnimalsCluster AnalysisAmino Acid SequenceMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsbiologySequence Analysis DNARetinoic acid receptor gammaBlotting Northernbiology.organism_classificationRetinoid X receptor gammaPoriferaCell biologySuberites domunculaRetinoic acid receptorRetinoid X ReceptorschemistryBiochemistryRetinoic acid receptor alphaInsect ScienceAnimal Science and ZoologySequence AlignmentTranscription FactorsJournal of Experimental Biology
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Identification of a novel Drosophila melanogaster gene, angel, a member of a nested gene cluster at locus 59F4,5.

1996

The identification of a novel Drosophila melanogaster gene, angel, is presented in this study. angel is located on the right arm of the second chromosome at locus 59F5, close to the nested genes l(2)tid, l(2)not, l(2)rot and l(2)dtl. We describe the genetic and molecular localization of angel and present its temporal expression in the wild-type. The deduced amino acid sequence of the ANG39 protein is characterized by a nuclear localization signal. Furthermore, the central part of the predicted ANG39 protein shows significant homology to the C-terminal portion of the yeast transcriptional effector CCR4.

DNA ComplementarySaccharomyces cerevisiae ProteinsMolecular Sequence DataRestriction MappingBiophysicsLocus (genetics)Genes InsectBiochemistryHomology (biology)ChromosomesFungal ProteinsRibonucleasesStructural BiologyGeneticsAnimalsDrosophila ProteinsAmino Acid SequenceCloning MolecularGenePeptide sequenceGeneticsbiologyBase SequenceEffectorChromosome MappingGene Expression Regulation Developmentalbiology.organism_classificationBlotting NorthernNested geneDrosophila melanogasterMultigene FamilyInsect ProteinsDrosophila melanogasterSequence AlignmentNuclear localization sequenceTranscription FactorsBiochimica et biophysica acta
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Isolation and characterization of five Fox (Forkhead) genes from the sponge Suberites domuncula.

2003

Fox or Forkhead genes constitute a subgroup of the helix-turn-helix class of transcription factors with a characteristic and highly conserved DNA binding domain. To date, around 100 different Fox genes have been reported ranging from yeast to humans; these have been classified into 18 subclasses (A to P). Fox proteins are responsible for a wide range of functions and key roles in early developmental processes, during organogenesis and also for the function of the major organs and tissues in the adult. Here, we report the isolation and phylogenetic characterization of five members of the Fox family from the sponge Suberites domuncula. Four of them (Sd-FoxL2, Sd-FoxP, Sd-FoxD and Sd-FoxF) fal…

DNA ComplementaryTime FactorsSequence analysisMolecular Sequence DataSequence alignmentBiologyFOX proteinsPhylogeneticsparasitic diseasesGeneticsAnimalsCloning MolecularGeneCells CulturedPhylogenyGeneticsSequence Homology Amino AcidGene Expression ProfilingGeneral MedicineDNA-binding domainAnatomySequence Analysis DNAbiology.organism_classificationPoriferaSuberites domunculaSpongeMultigene FamilySequence AlignmentTranscription FactorsGene
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The Mutation without childrenrgl Causes Ecdysteroid Deficiency in Third-Instar Larvae of Drosophila melanogaster

2000

Larvae homozygous for the recessive lethal allele without children(rgl) (woc(rgl)) fail to pupariate. Application of exogenous 20-hydroxyecdysone elicits puparium formation and pupation. Ecdysteroid titer measurements on mutant larvae show an endocrine deficiency in the brain-ring gland complex, which normally synthesizes ecdysone, resulting in a failure of the larvae to achieve a threshold whole body hormone titer necessary for molting. Ultrastructural investigation revealed extensive degeneration of the prothoracic cells of the ring gland in older larvae. The woc gene, located in polytene chromosomal region 97F, consists of 11 exons. A 6.8-kb transcript is expressed throughout development…

DNA Complementaryanimal structuresMolecular Sequence DataMutantwithout childrenmental retardation03 medical and health scienceschemistry.chemical_compoundExon0302 clinical medicineAnimalsDrosophila ProteinsHumansAmino Acid SequenceecdysoneMolecular BiologyAlleles030304 developmental biology0303 health sciencesEcdysteroidPolytene chromosomeBase Sequencezinc fingerbiologyHomozygotefungiEcdysteroidsCell Biologybiology.organism_classificationMolecular biology3. Good healthDNA-Binding ProteinsMicroscopy ElectronDrosophila melanogasterPhenotypechemistryMutagenesisLarvaring glandChromosomal regionInsect ProteinsSteroidsDrosophila melanogaster030217 neurology & neurosurgeryDrosophila ProteinEcdysoneTranscription FactorsDevelopmental BiologyDevelopmental Biology
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STAT Proteins: From Normal Control of Cellular Events to Tumorigenesis

2003

Signal transducers and activators of transcription (STAT) proteins comprise a family of transcription factors latent in the cytoplasm that participate in normal cellular events, such as differentiation, proliferation, cell survival, apoptosis, and angiogenesis following cytokine, growth factor, and hormone signaling. STATs are activated by tyrosine phosphorylation, which is normally a transient and tightly regulates process. Nevertheless, several constitutively activated STATs have been observed in a wide number of human cancer cell lines and primary tumors, including blood malignancies and solid neoplasias. STATs can be divided into two groups according to their specific functions. One is …

DNA-Binding ProteinsCell Transformation NeoplasticEukaryotic CellsSTAT1 Transcription FactorSettore MED/06 - Oncologia MedicaNeoplasmsSTATTrans-ActivatorsAnimalsHumansSignal TransductionTranscription Factors
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Assembly of Polycomb complexes and silencing mechanisms

2003

Polycomb complexes assemble at their target sites and silence neighboring genes when these are not actively transcribed. The action of these complexes and of Trithorax complexes bound to the Polycomb Response Element establish alternative silent or derepressed states that are remembered through cell division and maintained for the rest of development. Recent results that may help explain the properties of these states are reviewed.

DNA-Binding ProteinsPolycomb Repressive Complex 1AnimalsDrosophila ProteinsDrosophilaSettore BIO/11 - Biologia MolecolareGene SilencingChromatin silencingChromatinChromatin memoryTranscription FactorsPolycomb complexes
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gcType : a high-quality type strain genome database for microbial phylogenetic and functional research

2020

Abstract Taxonomic and functional research of microorganisms has increasingly relied upon genome-based data and methods. As the depository of the Global Catalogue of Microorganisms (GCM) 10K prokaryotic type strain sequencing project, Global Catalogue of Type Strain (gcType) has published 1049 type strain genomes sequenced by the GCM 10K project which are preserved in global culture collections with a valid published status. Additionally, the information provided through gcType includes >12 000 publicly available type strain genome sequences from GenBank incorporated using quality control criteria and standard data annotation pipelines to form a high-quality reference database. This …

Data AnalysisBACTERIALAcademicSubjects/SCI000100206 medical engineering02 engineering and technologyComputational biologyBiologyGenome03 medical and health sciencesMULTIPLE SEQUENCE ALIGNMENTPhylogeneticsRNA Ribosomal 16SDatabases GeneticGeneticsPROGRAMDatabase IssueALGORITHMPhylogeny030304 developmental biology0303 health sciencesGenomeMultiple sequence alignmentBase SequencePhylogenetic treeResearchGenome databaseBiology and Life SciencesGCM transcription factorsProkaryotic CellsGenBankReference database020602 bioinformatics
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In vivo fate mapping with SCL regulatory elements identifies progenitors for primitive and definitive hematopoiesis in mice.

2009

10 páginas, 6 figuras.-- et al.

Definitive hematopoiesisEmbryologyMyeloidPopulationConditional mouse modelIn vivo linage and fate tracingEmbryonic DevelopmentStem cell leukemia geneBiology03 medical and health sciencesMice0302 clinical medicineFate mappinghemic and lymphatic diseasesProto-Oncogene ProteinsCRE systemmedicineBasic Helix-Loop-Helix Transcription FactorsAnimalsCell LineageMesodermal blood cell specificationGene Knock-In TechniquesProgenitor celleducationGeneTetracycline systemT-Cell Acute Lymphocytic Leukemia Protein 1Primitive hematopoiesis030304 developmental biology0303 health scienceseducation.field_of_studyMicroscopy ConfocalStem CellsEmbryoFlow CytometryCell biologyHematopoiesisGastrulationHaematopoiesismedicine.anatomical_structureBlood cell precursors030220 oncology & carcinogenesisImmunologyIn vivo lineage markingDevelopmental BiologyMechanisms of development
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Expression of the transcription factor Pax6 in the adult rat dentate gyrus

2005

The transcription factor Pax 6 is expressed in precursor cells during embryonic CNS development, and it plays an important role in the regulation of cell proliferation and neuronal fate determination. Pax 6-expressing cells are also present in the adult hippocampal dentate gyrus and subventricular zone/rostral migratory stream, regions in which neuronal precursors exist during adult life. In the adult dentate gyrus, precursor cells are located in the innermost portion of the granule cell layer, and Pax 6-expressing nuclei are most abundant in this region. To examine the putative role of Pax 6 in adult hippocampal neurogenesis, we have studied the proliferative activity, distribution, and ph…

Doublecortin Domain ProteinsMalePAX6 Transcription FactorAntimetabolitesGreen Fluorescent ProteinsSubventricular zoneNerve Tissue ProteinsHippocampal formationBiologyNestinRats Sprague-DawleyCellular and Molecular NeuroscienceIntermediate Filament ProteinsGlial Fibrillary Acidic ProteinBasic Helix-Loop-Helix Transcription FactorsmedicineAnimalsPaired Box Transcription FactorsEye ProteinsCell ProliferationHomeodomain ProteinsNeuronsStem CellsDentate gyrusNeuropeptidesNeurogenesisGranule cellImmunohistochemistryRatsRepressor ProteinsNeuroepithelial cellNeuropoiesismedicine.anatomical_structureBromodeoxyuridinenervous systemDentate GyrusPAX6Plant LectinsMicrotubule-Associated ProteinsNeuroscienceJournal of Neuroscience Research
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