0000000000019726

AUTHOR

María J. Yebra

showing 14 related works from this author

Human milk and mucosal lacto- and galacto-N-biose synthesis by transgalactosylation and their prebiotic potential in Lactobacillus species.

2017

Lacto-N-biose (LNB) and galacto-N-biose (GNB) are major building blocks of free oligosaccharides and glycan moieties of glyco-complexes present in human milk and gastrointestinal mucosa. We have previously characterized the phospho-β-galactosidase GnbG from Lactobacillus casei BL23 that is involved in the metabolism of LNB and GNB. GnbG has been used here in transglycosylation reactions, and it showed the production of LNB and GNB with N-acetylglucosamine and N-acetylgalactosamine as acceptors, respectively. The reaction kinetics demonstrated that GnbG can convert 69 ± 4 and 71 ± 1 % of o-nitrophenyl-β-d-galactopyranoside into LNB and GNB, respectively. Those reactions were performed in a s…

0301 basic medicineGlycanLactobacillus caseiTransglycosylationAcetylgalactosamineGlycosylationMagnetic Resonance SpectroscopyGlycoside Hydrolasesmedicine.medical_treatment030106 microbiologyMicrobiologiaPrebioticBiologyLactobacillus gasseriDisaccharidesApplied Microbiology and BiotechnologyMicrobiologyAcetylglucosamine03 medical and health sciencesLactobacillus rhamnosusmedicineIntestinal MucosaGalacto-N-bioseLactobacillus johnsoniiMilk HumanPrebioticHuman milk oligosaccharidesfood and beveragesNucleic Acid HybridizationGeneral MedicineMetabolismbiology.organism_classificationLactobacilsKineticsLactobacillus030104 developmental biologyPrebioticsBiochemistrybiology.proteinFermentationLacto-N-bioseBiotechnologyApplied microbiology and biotechnology
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Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens

2019

25 Páginas, 7 figuras, 2 tablas

RNA virusesRotavirusViral DiseasesPhysiologyViral Nonstructural ProteinsPathology and Laboratory MedicineCrystallography X-Raymedicine.disease_causeBiochemistryBinding AnalysisReovirusesImmune PhysiologyRotavirusMedicine and Health SciencesChemical PrecipitationBiology (General)Antigens ViralGastroenterologiachemistry.chemical_classification0303 health sciencesImmune System ProteinsCrystallographyMolecular StructurebiologyPhysics030302 biochemistry & molecular biologyChemical ReactionsRNA-Binding ProteinsCondensed Matter PhysicsLigand (biochemistry)Amino acidChemistryInfectious DiseasesMedical MicrobiologyViral PathogensVirusesPhysical SciencesCrystal StructurePathogensCrystallizationResearch ArticleChemical ElementsGlycanQH301-705.5Virus RNAViral proteinImmunologyResearch and Analysis MethodsMicrobiologyABO Blood-Group SystemCell Line03 medical and health sciencesAntigenVirologyGeneticsmedicineSolid State PhysicsHumansAntigensBinding siteMicrobial PathogensMolecular BiologyRotavirus InfectionChemical Characterization030304 developmental biologyChemical PhysicsBinding SitesBiology and life sciencesMutagenesisOrganismsProteinsRC581-607Molecular biologyCarbonchemistrybiology.proteinCapsid ProteinsParasitologyImmunologic diseases. AllergyPLOS Pathogens
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In vitro colonic fermentation of a plant sterol-enriched beverage in a dynamic-colonic gastrointestinal digester

2021

Abstract The impact of a plant sterol-enriched beverage on the sterol metabolism, organic acid production and microbiota composition was evaluated by means of a dynamic gastrointestinal and colonic fermentation model. After one week of fermentation, an absence of sterol metabolites was reported, in accordance with the lack of microbiota related to their metabolism. Although total organic acid content was lower in the ascending colon (AC) compared to the transversal (TC) and descending colon (DC) (28–57 mmol/L vs. 55-87 and 44–64 mmol/L, respectively), its increments, with respect to the initial value, were higher (2-fold vs. 1.6- and 1.5-fold). Increments of acetate, butyrate and propionate…

0106 biological scienceschemistry.chemical_classificationbiologyBacteroidetes04 agricultural and veterinary sciencesMetabolismButyratebiology.organism_classification040401 food science01 natural sciencesSterol0404 agricultural biotechnologychemistry010608 biotechnologyMegasphaeraPropionateFermentationFood scienceFood ScienceBifidobacteriumLWT
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Unique Microbial Catabolic Pathway for the Human Core N-Glycan Constituent Fucosyl-α-1,6-N-Acetylglucosamine-Asparagine

2020

The survival of commensal bacteria in the human gut partially depends on their ability to metabolize host-derived molecules. The use of the glycosidic moiety of N-glycoproteins by bacteria has been reported, but the role of N-glycopeptides or glycoamino acids as the substrates for bacterial growth has not been evaluated. We have identified in Lactobacillus casei strain BL23 a gene cluster (alf-2) involved in the catabolism of the glycoamino acid fucosyl-α-1,6-N-GlcNAc-Asn (6′FN-Asn), a constituent of the core-fucosylated structures of mammalian N-glycoproteins. The cluster consists of the genes alfHC, encoding a major facilitator superfamily (MFS) permease and the α-l-fucosidase AlfC, and t…

Lactobacillus caseiGlycanMolecular Biology and Physiologyalpha-l-fucosidaseGlycosylasparaginaseMicrobiologiacore fucosylationGut floraMicrobiologydigestive systemFucosylated Nglycopeptideschemistry.chemical_compoundVirologyfucosylated N-glycopeptidesN-AcetylglucosamineHumansAsparagineSymbiosisFucosebiologyHost Microbial InteractionsChemistryProbioticsbiology.organism_classificationMajor facilitator superfamilyQR1-502LactobacilsglycosylasparaginaseCore fucosylationGastrointestinal TractMetabolic pathwayLacticaseibacillus caseiBiochemistryAlpha-L-fucosidaseMultigene Familybiology.proteinAsparagineLactobacillus caseiBacteriaMetabolic Networks and PathwaysResearch Article
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Infant gut microbiota modulation by human milk disaccharides in humanized microbiome mice

2021

Human milk glycans present a unique diversity of structures that suggest different mechanisms by which they may affect the infant microbiome development. A humanized mouse model generated by infant fecal transplantation was utilized here to evaluate the impact of fucosyl-α1,3-GlcNAc (3FN), fucosyl-α1,6-GlcNAc, lacto-N-biose (LNB) and galacto-N-biose on the fecal microbiota and host–microbiota interactions. 16S rRNA amplicon sequencing showed that certain bacterial genera significantly increased (Ruminococcus and Oscillospira) or decreased (Eubacterium and Clostridium) in all disaccharide-supplemented groups. Interestingly, cluster analysis differentiates the consumption of fucosyl-oligosacc…

0301 basic medicineMaleBifidobacterium longuminfant fecal microbiotaMicrobiologiaRC799-869Gut floraAcetatesDisaccharidesFecesMice0302 clinical medicinelacto-n-biosefluids and secretionsRuminococcus gnavusRNA Ribosomal 16SEubacteriumgalacto-n–bioseBifidobacteriumbiologyGastroenterologyDiseases of the digestive system. Gastroenterologylacto-N-biosegalacto-N–biosefucosyl-α-1ButyratesInfectious Diseases030211 gastroenterology & hepatologyFemaleResearch ArticleResearch PaperMicrobiology (medical)AdultDNA Bacterialhumanized mouse modelInfants Malaltiesshort-chain fatty acidsMicrobiologyMicrobiology03 medical and health sciencesfucosyl-α-16-N-acetylglucosamineYoung AdultAnimalsHumans6-n-acetylglucosamineMicrobiomeBacteriaMilk HumanRuminococcusInfant NewbornInfantAkkermansiafucosyl-α-13-N-acetylglucosaminebiology.organism_classificationcytokinesGastrointestinal Microbiome3-n-acetylglucosamineMice Inbred C57BL030104 developmental biologyshort-chain fatty acidscytokineshuman milk oligosaccharides
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Microbiota Depletion Promotes Human Rotavirus Replication in an Adult Mouse Model

2021

Intestinal microbiota-virus-host interaction has emerged as a key factor in mediating enteric virus pathogenicity. With the aim of analyzing whether human gut bacteria improve the inefficient replication of human rotavirus in mice, we performed fecal microbiota transplant (FMT) with healthy infants as donors in antibiotic-treated mice. We showed that a simple antibiotic treatment, irrespective of FMT, resulted in viral shedding for 6 days after challenge with the human rotavirus G1P[8] genotype Wa strain (RVwa). Rotavirus titers in feces were also significantly higher in antibiotic-treated animals with or without FMT but they were decreased in animals subject to self-FMT, where a partial re…

Rotavirus0301 basic medicinePermissivenessmiceQH301-705.5Virus RNA030106 microbiologyPopulationMicrobiologiaMedicine (miscellaneous)Antibiòticsmedicine.disease_causeGeneral Biochemistry Genetics and Molecular BiologyVirusArticlevirus sheddingMicrobiologyMice03 medical and health sciencesAntigenAntibioticsRotavirusLactobacillusantibioticmedicinemicrobiotaBiology (General)Viral sheddingeducationFecesInfectivityeducation.field_of_studyInnate immune systembiologyMicrobiotaVirus sheddingbiology.organism_classificationSmall intestine030104 developmental biologymedicine.anatomical_structurerotavirusBiomedicines
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Impact of a Plant Sterol- and Galactooligosaccharide-Enriched Beverage on Colonic Metabolism and Gut Microbiota Composition Using an In Vitro Dynamic…

2019

This document is he Accepted Manuscript version of a Published Work that appeared in final form in Journal of Agricultural and Food Chemistry, copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see https://doi.org/10.1021/acs.jafc.9b04796

0106 biological sciencesmedicine.medical_treatmentButyrateGut flora01 natural scienceschemistry.chemical_compoundShort-chain fatty acidsmedicineFood science16S rRNA gene sequencingchemistry.chemical_classificationSterol metabolitesbiologyChemistryGalactooligosaccharidePrebiotic010401 analytical chemistryLachnospiraceaeGeneral ChemistryMetabolismbiology.organism_classificationSterol0104 chemical sciencesDynamic colonic fermentationPropionateLactateGeneral Agricultural and Biological Sciences010606 plant biology & botany
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The extracellular wall-bound β-N-acetylglucosaminidase from Lactobacillus casei is involved in the metabolism of the human milk oligosaccharide lacto…

2015

Human milk oligosaccharides (HMOs) are considered to play a key role in establishing and maintaining the infant gut microbiota. Lacto-N-triose forms part of both type 1 and type 2 HMOs and also of the glycan moieties of glycoproteins. Upstream of the previously characterized gene cluster involved in lacto-N-biose and galacto-N-biose metabolism from Lactobacillus casei BL23, there are two genes, bnaG and manA, encoding a β-N-acetylglucosaminidase precursor and a mannose-6-phosphate isomerase, respectively. In this work, we show that L. casei is able to grow in the presence of lacto-N-triose as a carbon source. Inactivation of bnaG abolished the growth of L. casei on this oligosaccharide, dem…

0301 basic medicineLactobacillus caseiGlycan030106 microbiologyMutantMannoseOligosaccharidesGenetics and Molecular BiologyApplied Microbiology and BiotechnologyMicrobiology03 medical and health scienceschemistry.chemical_compoundBacterial ProteinsCell WallAcetylglucosaminidaseHumanschemistry.chemical_classificationEcologybiologyMilk Humanfood and beveragesOligosaccharidebiology.organism_classificationEnzyme assayLacticaseibacillus caseiEnzymechemistryBiochemistrybiology.proteinGlycoproteinTrisaccharidesFood ScienceBiotechnology
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Replication of Human Norovirus in Mice after Antibiotic-Mediated Intestinal Bacteria Depletion

2022

Human noroviruses (HuNoVs) are the main cause of acute gastroenteritis causing more than 50,000 deaths per year. Recent evidence shows that the gut microbiota plays a key role in enteric virus infectivity. In this context, we tested whether microbiota depletion or microbiota replacement with that of human individuals susceptible to HuNoVs infection could favor viral replication in mice. Four groups of mice (n = 5) were used, including a control group and three groups that were treated with antibiotics to eliminate the autochthonous intestinal microbiota. Two of the antibiotic-treated groups received fecal microbiota transplantation from a pool of feces from infants (age 1-3 months) or an au…

Virus RNAMicrobiologiaAntibiòticsDNA RibosomalCatalysisInorganic ChemistryFecesMicenorovirus; antibiotic; microbiota; mice; virus sheddingAnimalsHumansPhysical and Theoretical ChemistryMolecular BiologySpectroscopyCaliciviridae InfectionsInterleukin-13BacteriaTumor Necrosis Factor-alphaMicrobiotaNorovirusOrganic ChemistryAntibioticInfantVirus sheddingGeneral MedicineToll-Like Receptor 2Anti-Bacterial AgentsComputer Science ApplicationsInterleukin-4
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Human milk and mucosa-associated disaccharides impact on cultured infant fecal microbiota

2020

Human milk oligosaccharides (HMOs) are a mixture of structurally diverse carbohydrates that contribute to shape a healthy gut microbiota composition. The great diversity of the HMOs structures does not allow the attribution of specific prebiotic characteristics to single milk oligosaccharides. We analyze here the utilization of four disaccharides, lacto-N-biose (LNB), galacto-N-biose (GNB), fucosyl-α1,3-GlcNAc (3FN) and fucosyl-α1,6-GlcNAc (6FN), that form part of HMOs and glycoprotein structures, by the infant fecal microbiota. LNB significantly increased the total levels of bifidobacteria and the species Bifidobacterium breve and Bifidobacterium bifidum. The Lactobacillus genus levels wer…

0301 basic medicineFormatesMolecular biologymedicine.medical_treatmentved/biology.organism_classification_rank.specieslcsh:MedicineMicrobiologiaGut floraAcetatesBifidobacterium breveDisaccharidesFecesfluids and secretionsFucosyl-α13-GlcNAcLactobacillusFood sciencelcsh:ScienceBifidobacterium2. Zero hungerClostridialesMultidisciplinaryBifidobacterium brevebiologyHuman milk oligosaccharidesfood and beveragesFucosyl-α16-GlcNAcEnterobacteriaceae3. Good healthDNA Bacterial030106 microbiologyGut microbiotaDisaccharidasesMicrobiologydigestive systemArticleAcetylglucosamine03 medical and health sciencesEnterobacteriaceaemedicineHumansLactic AcidGalacto-N-bioseBifidobacterium bifidumMilk Humanved/biologyPrebioticlcsh:RInfantbiology.organism_classificationLactobacilsGastrointestinal MicrobiomeLactobacillus030104 developmental biologyPrebioticslcsh:QFermentationBifidobacterium bifidumLacto-N-biose
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Infant Gut Microbial Metagenome Mining of α- l -Fucosidases with Activity on Fucosylated Human Milk Oligosaccharides and Glycoconjugates

2022

The gastrointestinal microbiota members produce α-l-fucosidases that play key roles in mucosal, human milk, and dietary oligosaccharide assimilation. Here, 36 open reading frames (ORFs) coding for putative α-l-fucosidases belonging to glycosyl hydrolase family 29 (GH29) were identified through metagenome analysis of breast-fed infant fecal microbiome. Twenty-two of those ORFs showed a complete coding sequence with deduced amino acid sequences displaying the highest degree of identity with α-l-fucosidases from Bacteroides thetaiotaomicron, Bacteroides caccae, Phocaeicola vulgatus, Phocaeicola dorei, Ruminococcus gnavus, and Streptococcus parasanguinis. Based on sequence homology, 10 α-l-fuco…

Microbiology (medical)PhysiologyInfant gutMicrobiologiaHisto-blood group antigensOligosaccharidesPolysaccharidesGeneticsAnimalsHumansα-l-fucosidaseGlycoproteinsFucoseMammalsalpha-L-FucosidaseMilk HumanGeneral Immunology and MicrobiologyEcologyMicrobiotaHuman milk oligosaccharidesInfant NewbornInfantCell BiologyGastrointestinal MicrobiomeGenòmicaInfectious DiseasesBlood Group AntigensMetagenomeGlycoconjugatesMicrobiology Spectrum
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Noroviral P-Particles as an In Vitro Model to Assess the Interactions of Noroviruses with Probiotics

2014

Noroviruses (NoVs) are the main etiologic agents of acute epidemic gastroenteritis and probiotic bacteria have been reported to exert a positive effect on viral diarrhea. The protruding (P) domain from NoVs VP1 capsid protein has the ability to assemble into the so-called P-particles, which retain the binding ability to host receptors. We purified the P-domains from NoVs genotypes GI.1 and GII.4 as 6X(His)-tagged proteins and determined that, similar to native domains, they were structured into P-particles that were functional in the recognition of the specific glycoconjugated receptors, as established by surface plasmon resonance experiments. We showed that several lactic acid bacteria (pr…

Applied Microbiologylcsh:Medicinemedicine.disease_causeBiochemistrylaw.inventionProbioticGastrointestinal tractlawLactobacillusGram Negativelcsh:ScienceReceptorMultidisciplinarybiologyBacterial PathogensGastroenteritisHost-Pathogen InteractionLacticaseibacillus caseiHost-Pathogen InteractionsMedicineReceptors VirusBacterial and Foodborne IllnessHT29 CellsGram negative bacteriaResearch ArticleProtein BindingLactobacillus caseiGram-negative bacteriaVirus AttachmentGastroenterology and HepatologyMicrobiologyMicrobiologyVirologyViruslike ParticlesEscherichia colimedicineHumansProtein InteractionsBiologyEscherichia coliProbioticsNoroviruslcsh:RHealth careProteinsCell bindingBacteriologySurface Plasmon Resonancebiology.organism_classificationVirologyIn vitroLactobacillusEnterocytesCapsid Proteinslcsh:QBacteria
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The lactose operon from Lactobacillus casei is involved in the transport and metabolism of the human milk oligosaccharide core-2 N-acetyllactosamine

2018

The lactose operon (lacTEGF) from Lactobacillus casei strain BL23 has been previously studied. The lacT gene codes for a transcriptional antiterminator, lacE and lacF for the lactose-specific phosphoenolpyruvate: phosphotransferase system (PTS) EIICB and EIIA domains, respectively, and lacG for the phospho-β-galactosidase. In this work, we have shown that L. casei is able to metabolize N-acetyllactosamine (LacNAc), a disaccharide present at human milk and intestinal mucosa. The mutant strains BL153 (lacE) and BL155 (lacF) were defective in LacNAc utilization, indicating that the EIICB and EIIA of the PTS are involved in the uptake of LacNAc in addition to lactose. Inactivation of lacG aboli…

0301 basic medicineLactobacillus caseiScience030106 microbiologyDisaccharideOligosaccharideslac operonLactoseBacterisArticle03 medical and health scienceschemistry.chemical_compoundIntestinal mucosaHumansIntestinal MucosaLactosePhosphoenolpyruvate Sugar Phosphotransferase SystemAldose-Ketose IsomerasesCell Proliferationchemistry.chemical_classificationMultidisciplinaryMilk HumanbiologyQRGalactoseAmino SugarsPEP group translocationOligosaccharidebiology.organism_classificationLactobacilsLacticaseibacillus caseiLac OperonchemistryBiochemistryGalactoseMedicine
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Interaction of Intestinal Bacteria with Human Rotavirus during Infection in Children

2021

The gut microbiota has emerged as a key factor in the pathogenesis of intestinal viruses, including enteroviruses, noroviruses and rotaviruses (RVs), where stimulatory and inhibitory effects on infectivity have been reported. With the aim of determining whether members of the microbiota interact with RVs during infection, a combination of anti-RV antibody labeling, fluorescence-activated cell sorting and 16S rRNA amplicon sequencing was used to characterize the interaction between specific bacteria and RV in stool samples of children suffering from diarrhea produced by G1P[8] RV. The genera Ruminococcus and Oxalobacter were identified as RV binders in stools, displaying enrichments between …

0301 basic medicineRotavirusOxalobacter030106 microbiologyMicrobiologiaGut microbiotaBiologyGut floramedicine.disease_causeBacterisCatalysisRotavirus InfectionsArticleMicrobiologylcsh:ChemistryInorganic Chemistry03 medical and health sciencesAntigenBacterial ProteinsRotavirusRuminococcusmedicineHumansPhysical and Theoretical Chemistrylcsh:QH301-705.5Molecular BiologySpectroscopyInfectivity<i>Ruminococcus</i>gut microbiotaRuminococcusOrganic ChemistryAntibody titerGeneral Medicinebiology.organism_classificationComputer Science ApplicationsGastrointestinal MicrobiomeIntestines030104 developmental biologylcsh:Biology (General)lcsh:QD1-999Child Preschoolbiology.proteinAntibodyCaco-2 CellsBacteriaProtein Binding
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