0000000000049588

AUTHOR

Reino Laatikainen

showing 10 related works from this author

A CNDO/2 study on the additivity and the nature of the non-additivity of the substituent effects on13C NMR shifts in chlorobenzenes and chlorophenols

1980

The general correlation between the electron densities and the 13C NMR chemical shifts is found to be quite poor in the cases discussed. The non-additivities of the substituent effects on the chemical shifts and the CNDO/2 electron densities correlate only weakly. However, when the electron densities are made specific to different types of atomic orbitals, the s electrons have a pronounced effect in all the models tested. This is explained by an indirect effect on the 〈1/r3〉 term of the p electrons. Good correlations are found between the sums of the chemical shifts and the corresponding sums of the substituent charge excesses. The different behaviour of OH and Cl substituents in the additi…

CNDO/2chemistry.chemical_compoundAtomic orbitalComputational chemistryChemistryChlorobenzeneChemical shiftAdditive functionSubstituentGeneral Materials ScienceGeneral ChemistryElectronCarbon-13 NMROrganic Magnetic Resonance
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Complete Spectral Analysis of the1H NMR 16-Spin System of β-Pinene

1997

The complete analysis of the 1H NMR spectrum of β-pinene, (1S)-(-)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane, which is of the ABCDEFGHIJX3Y3 type, is reported and earlier results are corrected. The vicinal coupling constants, 3J(H,H), are compared with the theoretical values calculated by using the Altona and co-workers’ equations for the structure derived by molecular modelling. The results were applied to the conformational analysis of β-pinene. © 1997 John Wiley & Sons, Ltd.

Coupling constantHeptanePineneCarbon-13 NMR satelliteSpin systemGeneral Chemistrychemistry.chemical_compoundchemistryComputational chemistryProton NMRPhysical chemistryGeneral Materials ScienceSpectral analysisVicinalMagnetic Resonance in Chemistry
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<strong>QUANTITATIVE QUANTUM MECHANICAL NMR ANALYSIS: THE SUPERIOR TOOL FOR ANALYSIS OF BIOFLUIDS</strong>

2016

Almost automatic quantitative analysis of biofluids is now behind only a few clicks from sample to EXCEL table after minimal sample preparation (move 0.3 ml sample into NMR tube and add buffer), without separations, calibration and reference materials, even for unknown compounds!  Each organic compound with protons gives a highly diagnostic and unique NMR spectrum which is practically identical with any spectrometer operating at certain field. A distinctive feature of high-resolution 1D NMR spectra is that even the most complex spectrum of a compound can be described by a few spectral parameters within experimental accuracy, employing a quantum mechanical theory. The NMR spectral parameters…

chemistry.chemical_compoundMaterials sciencechemistrySpectrometerAnalytical chemistryProton NMRCalibrationNMR tubeSample preparationNuclear magnetic resonance spectroscopyCombinatorial chemistryThorinSpectral lineProceedings of The 1st International Electronic Conference on Metabolomics
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Discovery of 5-benzyl-3-phenyl-4,5-dihydroisoxazoles and 5-benzyl-3-phenyl-1,4,2-dioxazoles as potent firefly luciferase inhibitors.

2013

Luciferase reporter assays are commonly used in high-throughput screening methods. Here, we report new firefly luciferase (FLuc) inhibitors based on 5-benzyl-3-phenyl-4,5-dihydroisoxazoles and 5-benzyl-3-phenyl-1,4,2-dioxazoles, which showed up as "false positives" in a luciferase reporter gene-based assay for nuclear receptor antagonists. The inhibition was shown to be noncompetitive for both natural enzyme substrates (d-luciferin and ATP) and selective to FLuc and proven to arise from a direct interaction between the enzyme and the inhibitor. Of the 63 evaluated compounds, 28 showed significantly better inhibition potency than the well-known inhibitor resveratrol (IC(50) = 59 nM), with fi…

AzolesModels MolecularMagnetic Resonance SpectroscopyStereochemistryDrug Evaluation PreclinicalResveratrolCell Linechemistry.chemical_compoundInhibitory Concentration 50Drug DiscoveryScreening methodIc50 valuesPotencyAnimalsLuciferaseEnzyme InhibitorsLuciferasesIC50ta116chemistry.chemical_classificationFirefliesEnzymechemistryNuclear receptorBiochemistryMolecular MedicineJournal of medicinal chemistry
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A statistical study of the additivities of substituent effects in the13C NMR chemical shifts of hydroxy- and chloro-substituted benzenes

1980

The 13C NMR spectra of six hydroxybenzenes, all chlorobenzenes, all chlorophenols and eight chlorocatechols are measured and assigned. The additivity of the substituent effects and the usefulness of some corrective parameters are studied with regression analysis. The order of the chemical shifts is most efficiently predicted by the simplest substituent effect model, containing only the direct effects of the substituents, although the 95% confidence limits of the calculated shifts are as high as 5.6 ppm. If the chemical shifts need to be predicted within the measuring errors (approximately 0.05–0.10 ppm, in the present data), the number of necessary corrections is very impractical. The corre…

ChemistryStereochemistryChemical shiftDirect effectsSubstituentGeneral ChemistryCarbon-13 NMRSpectral lineSolventchemistry.chemical_compoundChlorobenzeneComputational chemistryAdditive functionGeneral Materials ScienceOrganic Magnetic Resonance
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Design, synthesis, and biological evaluation of nonsteroidal cycloalkane[d]isoxazole-containing androgen receptor modulators.

2012

We report here the design, preparation, and systematic evaluation of a novel cycloalkane[d]isoxazole pharmacophoric fragment-containing androgen receptor (AR) modulators. Cycloalkane[d]isoxazoles form new core structures that interact with the hydrophobic region of the AR ligand-binding domain. To systematize and rationalize the structure-activity relationship of the new fragment, we used molecular modeling to design a molecular library containing over 40 cycloalkane[d]isoxazole derivatives. The most potent compound, 4-(3a,4,5,6,7,7a-hexahydrobenzo[d]isoxazol-3-yl)-2-(trifluoromethyl)benzonitrile (6a), exhibits antiandrogenic activity significantly greater than that of the most widely used …

Models MolecularBicalutamideMolecular modelStereochemistryProtein ConformationChemistry Techniques Syntheticchemistry.chemical_compoundStructure-Activity RelationshipDrug DiscoveryChlorocebus aethiopsmedicineAnimalsIsoxazoleNonsteroidal Anti-AndrogensTrifluoromethylta1182CycloparaffinsIsoxazolesAndrogen receptorCycloalkaneBenzonitrilechemistryReceptors AndrogenDrug DesignCOS CellsMolecular MedicineHydroxyflutamidemedicine.drugJournal of medicinal chemistry
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Comprehensive Strategy for Proton Chemical Shift Prediction: Linear Prediction with Nonlinear Corrections

2014

A fast 3D/4D structure-sensitive procedure was developed and assessed for the chemical shift prediction of protons bonded to sp3carbons, which poses the maybe greatest challenge in the NMR spectral parameter prediction. The LPNC (Linear Prediction with Nonlinear Corrections) approach combines three well-established multivariate methods viz. the principal component regression (PCR), the random forest (RF) algorithm, and the k nearest neighbors (kNN) method. The role of RF is to find nonlinear corrections for the PCR predicted shifts, while kNN is used to take full advantage of similar chemical environments. Two basic molecular models were also compared and discussed: in the MC model the desc…

business.industryComputer scienceGeneral Chemical EngineeringMonte Carlo methodLinear predictionGeneral ChemistryLibrary and Information SciencesMachine learningcomputer.software_genreComputer Science ApplicationsRandom forestk-nearest neighbors algorithmMolecular dynamicsNonlinear systemPrincipal component regressionArtificial intelligenceStatistical physicsbusinessConformational isomerismcomputerta116Journal of Chemical Information and Modeling
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Timolol derivatives. I. X-ray, NMR and theoretical studies of the crystallization of (S)-timolol O,O-diacetyl-l-tartaric acid monoester

1993

Abstract The absolute configurations of (S)-timolol hemihydrate and (S)-timolol O,O-diacetyl-(R,R)-tartaric acid monoester were determined by single crystal X-ray diffraction. An NMR analysis based on the temperature dependence of vicinal coupling constants was carried out to characterize the conformational behaviour of the S,R,R- and R,R,R-forms in solution. The same conformation as in crystalline state was also found in solution, although with a rather low preference over some other conformations. Results of theoretical calculations using MNDO and AMBER force field methods are reported. An infinite chain of hydrogen bonds, along with other favourable inter- and intramolecular forces that …

ChemistryHydrogen bondStereochemistryOrganic ChemistryAbsolute configurationMNDOCrystal structureNuclear magnetic resonance spectroscopyCatalysislaw.inventionInorganic ChemistryCrystallographylawIntramolecular forcePhysical and Theoretical ChemistryCrystallizationSingle crystalTetrahedron: Asymmetry
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CCDC 906031: Experimental Crystal Structure Determination

2013

Related Article: Pekka K.Poutiainen ,Jorma J.Palvimo,Ari E.Hinkkanen,Arto Valkonen,Topi K.Vaisanen,Reino Laatikainen,Juha T.Pulkkinen|2013|J.Med.Chem.|56|1064|doi:10.1021/jm301516q

5-(4-Fluorobenzyl)-3-(4-methoxyphenyl)-45-dihydro-12-oxazoleSpace GroupCrystallographyCrystal SystemCrystal StructureCell ParametersExperimental 3D Coordinates
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CCDC 906030: Experimental Crystal Structure Determination

2013

Related Article: Pekka K.Poutiainen ,Jorma J.Palvimo,Ari E.Hinkkanen,Arto Valkonen,Topi K.Vaisanen,Reino Laatikainen,Juha T.Pulkkinen|2013|J.Med.Chem.|56|1064|doi:10.1021/jm301516q

5-(4-Fluorobenzyl)-3-(4-methoxyphenyl)-45-dihydro-12-oxazoleSpace GroupCrystallographyCrystal SystemCrystal StructureCell ParametersExperimental 3D Coordinates
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