0000000000174430

AUTHOR

Paul R. Berg

0000-0002-4974-8509

showing 9 related works from this author

Ticket to spawn: Combining economic and genetic data to evaluate the effect of climate and demographic structure on spawning distribution in Atlantic…

2019

Abstract Climate warming and harvesting affect the dynamics of species across the globe through a multitude of mechanisms, including distribution changes. In fish, migrations to and distribution on spawning grounds are likely influenced by both climate warming and harvesting. The Northeast Arctic (NEA) cod (Gadus morhua) performs seasonal migrations from its feeding grounds in the Barents Sea to spawning grounds along the Norwegian coast. The distribution of cod between the spawning grounds has historically changed at decadal scales, mainly due to variable use of the northern and southern margins of the spawning area. Based on historical landing records, two major hypotheses have been put f…

0106 biological sciencesdemography010504 meteorology & atmospheric sciencesClimate ChangeFisheriesClimate change2306 Global and Planetary Change10125 Paleontological Institute and MuseumFish stock010603 evolutionary biology01 natural sciences2300 General Environmental Scienceddc:590spawning distributionGadusEnvironmental ChemistryAnimalsPrimary Research Article14. Life underwaterAtlantic Ocean0105 earth and related environmental sciencesGeneral Environmental ScienceGlobal and Planetary ChangebiologyEcologyNorwayReproductionGlobal warmingbiology.organism_classificationPrimary Research ArticlesSpawn (biology)FisheryGeographyHabitatArctic560 Fossils & prehistoric lifeGadus morhua2304 Environmental Chemistrysize truncationgenetic dataeconomic dataAtlantic cod2303 EcologyAnimal DistributionGlobal change biology
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Genetic structuring in Atlantic haddock contrasts with current management regimes

2020

AbstractThe advent of novel genetic methods has made it possible to investigate population structure and connectivity in mobile marine fish species: knowledge of which is essential to ensure a sustainable fishery. Haddock (Melanogrammus aeglefinus) is a highly exploited marine teleost distributed along the coast and continental shelf on both sides of the North Atlantic Ocean. However, little is known about its population structure. Here, we present the first study using single-nucleotide polymorphism (SNP) markers to assess the genetic population structure of haddock at multiple geographic scales, from the trans-Atlantic to the local (fjord) level. Genotyping 138 SNP loci in 1329 individual…

0106 biological sciences0301 basic medicinePopulation geneticsAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesStructuringGenetic population structure of fish in the North AtlanticFiskeriforvaltningGenetic diversity03 medical and health sciencesVDP::Genetikk og genomikk: 474Fisheries ManagementGenetisk populasjonsstruktur hos fisk i NordatlanterenEcology Evolution Behavior and SystematicsEcologybiologyHaddockbiology.organism_classificationFishery030104 developmental biologyGeographyCurrent managementHyseGenetisk diversitetPopulasjonsgenetikkHaddock
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Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod

2016

AbstractIdentification of genome-wide patterns of divergence provides insight on how genomes are influenced by selection and can reveal the potential for local adaptation in spatially structured populations. In Atlantic cod – historically a major marine resource – Northeast-Arctic- and Norwegian coastal cod are recognized by fundamental differences in migratory and non-migratory behavior, respectively. However, the genomic architecture underlying such behavioral ecotypes is unclear. Here, we have analyzed more than 8.000 polymorphic SNPs distributed throughout all 23 linkage groups and show that loci putatively under selection are localized within three distinct genomic regions, each of sev…

0106 biological sciences0301 basic medicineLinkage disequilibriumHeterozygoteGenotypePopulation010603 evolutionary biology01 natural sciencesGenomePolymorphism Single NucleotideArticleLinkage Disequilibrium03 medical and health sciencesVDP::Matematikk og naturvitenskap: 400::Basale biofag: 470::Genetikk og genomikk: 474Genetic variationAnimals14. Life underwatereducationLocal adaptationGeneticsEcotypeGene Rearrangementeducation.field_of_studyMultidisciplinaryGenomeEcotypebiologyGenetic VariationBayes TheoremGene rearrangementbiology.organism_classificationVDP::Mathematics and natural scienses: 400::Basic biosciences: 470::Genetics and genomics: 474030104 developmental biologyGadus morhuaEvolutionary biologyAnimal MigrationAtlantic codScientific Reports
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Coastal Research Seen Through an Early Career Lens—A Perspective on Barriers to Interdisciplinarity in Norway

2021

The value of interdisciplinarity for solving complex coastal problems is widely recognized. Many early career researchers (ECRs) therefore actively seek this type of collaboration through choice or necessity, for professional development or project funding. However, establishing and conducting interdisciplinary research collaborations as an ECR has many challenges. Here, we identify these challenges through the lens of ECRs working in different disciplines on a common ecosystem, the Norwegian Skagerrak coast. The most densely populated coastline in Norway, the Skagerrak coast, is experiencing a multitude of anthropogenic stressors including fishing, aquaculture, eutrophication, climate chan…

0106 biological sciences2019-20 coronavirus outbreak010504 meteorology & atmospheric sciencesScienceFishingClimate changeOcean EngineeringFunding MechanismAquatic ScienceQH1-199.5Oceanography01 natural sciencesSkagerrakinterdisciplinarityVDP::Matematikk og Naturvitenskap: 400::Geofag: 450Early careerearly career researchersEnvironmental planning0105 earth and related environmental sciencesWater Science and TechnologyGlobal and Planetary ChangeNorway010604 marine biology & hydrobiologyMultitudePerspective (graphical)Professional developmentQGeneral. Including nature conservation geographical distributionoceanmarine science and technology
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The era of reference genomes in conservation genomics

2022

Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique insights into genomic diversity and architecture, thereby enabling comprehensive analyses of population and functional genomics, and are expected to revolutionize conservation genomics.

QH301 Biology580 Plants (Botany)Genetics -- ResearchEvolutionsbiologibiodiversity conservation; conservation genetics; ERGA; European Reference Genome AtlasConservation genetics; Biodiversity conservation; European Reference Genome Atlas; ERGAAnimal genome mappingudc:630*1GenomeGEERGA[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE][SDE.BE.BIOD]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.biodERGA ; Biodiversity [MeSH] ; Genomics [MeSH] ; Ecology Evolution Behavior and Systematics ; conservation genetics ; Genome [MeSH] ; biodiversity conservation ; European Reference Genome Atlas3rd-DASGenomicsBiodiversityreferenčni genomi[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM][SDE.BE.BEC]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.becChemistry10121 Department of Systematic and Evolutionary BotanygenomikaGE Environmental Sciences:Informàtica::Aplicacions de la informàtica::Bioinformàtica [Àrees temàtiques de la UPC]biodiverzitetaSettore BIO/18 - GENETICAeducationQH426 GeneticsQH301European Reference Genome AtlasVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470[SDE.BE.EVO]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.evoGeneticsconservation genetics ; biodiversity conservation ; European Reference Genome Atlas ; ERGAgenomi10211 Zurich-Basel Plant Science CenterGenomesGenetikBiologyQH426Ecology Evolution Behavior and SystematicsEvolutionary BiologyBiodiversity conservation; Conservation genetics; European Reference Genome AtlasAmbientaleEcologíaGenética1105 Ecology Evolution Behavior and Systematicsconservation geneticsWildlife conservation570 Life sciences; biologyHuman medicinebiodiversity conservationAnimal genetics[SDE.BE]Environmental Sciences/Biodiversity and EcologyGenètica
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Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions

2017

Chromosomal rearrangements such as inversions can play a crucial role in maintaining polymorphism underlying complex traits and contribute to the process of speciation. In Atlantic cod (Gadus morhua), inversions of several megabases have been identified that dominate genomic differentiation between migratory and nonmigratory ecotypes in the Northeast Atlantic. Here, we show that the same genomic regions display elevated divergence and contribute to ecotype divergence in the Northwest Atlantic as well. The occurrence of these inversions on both sides of the Atlantic Ocean reveals a common evolutionary origin, predating the >100 000-year-old trans-Atlantic separation of Atlantic cod. The long…

0301 basic medicinemedia_common.quotation_subjectPopulationPolymorphism Single NucleotideLinkage DisequilibriumDivergence03 medical and health sciencesGeneticsAnimalsGadus14. Life underwatereducationAtlantic OceanGenetics (clinical)Coevolutionmedia_commonChromosomal inversionEcotypeeducation.field_of_studyEcotypebiologyEcologybiology.organism_classificationSpeciationGenetics Population030104 developmental biologyGadus morhuaChromosome InversionOriginal ArticleAnimal MigrationAtlantic codHeredity
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"Islands of divergence" in the Atlantic cod genome represent polymorphic chromosomal rearrangements

2016

- In several species genetic differentiation across environmental gradients or between geographically separate populations has been reported to center at “genomic islands of divergence,” resulting in heterogeneous differentiation patterns across genomes. Here, genomic regions of elevated divergence were observed on three chromosomes of the highly mobile fish Atlantic cod (Gadus morhua) within geographically fine-scaled coastal areas. The “genomic islands” extended at least 5, 9.5, and 13 megabases on linkage groups 2, 7, and 12, respectively, and coincided with large blocks of linkage disequilibrium. For each of these three chromosomes, pairs of segregating, highly divergent alleles were id…

0301 basic medicineGene FlowLinkage disequilibriumpopulation genomicsGenomePolymorphism Single NucleotideChromosomesLinkage DisequilibriumDivergenceGene flowPopulation genomics03 medical and health sciencesecological adaptationVDP::Genetikk og genomikk: 474VDP::Genetics and genomics: 474GeneticsGadusAnimalsAllele:Genetikk og genomikk: 474 [VDP]Ecology Evolution Behavior and Systematicschromosomal rearrangementsChromosomal inversionGeneticsmarine organismsGenomebiologystructural polymorphismsbiology.organism_classificationAdaptation Physiological030104 developmental biologyGadus morhuaChromosome InversionMetagenomics:Genetics and genomics: 474 [VDP]Research Article
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Data from: Genome architecture enables local adaptation of Atlantic cod despite high connectivity

2017

Adaptation to local conditions is a fundamental process in evolution; however, mechanisms maintaining local adaptation despite high gene flow are still poorly understood. Marine ecosystems provide a wide array of diverse habitats that frequently promote ecological adaptation even in species characterized by strong levels of gene flow. As one example, populations of the marine fish Atlantic cod (Gadus morhua) are highly connected due to immense dispersal capabilities but nevertheless show local adaptation in several key traits. By combining population genomic analyses based on 12K single nucleotide polymorphisms with larval dispersal patterns inferred using a biophysical ocean model, we show…

medicine and health carePopulation Divergencechromosomal inversionLife SciencesMedicinebiophysical modeling
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Data from: Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions

2017

Chromosomal rearrangements such as inversions can play a crucial role in maintaining polymorphism underlying complex traits and contribute to the process of speciation. In Atlantic cod (Gadus morhua), inversions of several megabases have been identified that dominate genomic differentiation between migratory and non-migratory ecotypes in the Northeast Atlantic. Here, we show that the same genomic regions display elevated divergence and contribute to ecotype divergence in the Northwest Atlantic as well. The occurrence of these inversions on both sides of the Atlantic Ocean reveals a common evolutionary origin, predating the more than 100,000 years old trans-Atlantic separation of Atlantic co…

medicine and health careGenomic adaptationInversion polymorphismLife SciencesMedicineChromosomal rearrangementecological divergenceSNPs
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