0000000000389065

AUTHOR

Elina Balodite

showing 7 related works from this author

Respiratory type II NAD(P)H dehydrogenase of Zymomonas mobilis with altered cofactor specificity

2014

NAD(P)H dehydrogenasebiologyBiochemistryChemistryBiophysicsbiology.proteinCell BiologyRespiratory systembiology.organism_classificationBiochemistryZymomonas mobilisCofactorBiochimica et Biophysica Acta (BBA) - Bioenergetics
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Structure of the Zymomonas mobilis respiratory chain: oxygen affinity of electron transport and the role of cytochrome c peroxidase

2014

The genome of the ethanol-producing bacterium Zymomonas mobilis encodes a bd-type terminal oxidase, cytochrome bc 1 complex and several c-type cytochromes, yet lacks sequences homologous to any of the known bacterial cytochrome c oxidase genes. Recently, it was suggested that a putative respiratory cytochrome c peroxidase, receiving electrons from the cytochrome bc 1 complex via cytochrome c 552, might function as a peroxidase and/or an alternative oxidase. The present study was designed to test this hypothesis, by construction of a cytochrome c peroxidase mutant (Zm6-perC), and comparison of its properties with those of a mutant defective in the cytochrome b subunit of the bc 1 complex (Zm…

ZymomonasbiologyCytochrome bc1Cytochrome c peroxidaseCytochrome cCytochrome dCytochrome-c PeroxidaseMicrobiologyMolecular biologyStandardElectron TransportOxygenBiochemistryCytochrome C1Coenzyme Q – cytochrome c reductasebiology.proteinCytochrome c oxidaseOxidoreductasesPhysiology and BiochemistryGene DeletionPeroxidaseMicrobiology
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Metabolic Engineering of Bacterial Respiration: High vs. Low P/O and the Case of Zymomonas mobilis

2019

Respiratory chain plays a pivotal role in the energy and redox balance of aerobic bacteria. By engineering respiration, it is possible to alter the efficiency of energy generation and intracellular redox state, and thus affect the key bioprocess parameters: cell yield, productivity and stress resistance. Here we summarize the current metabolic engineering and synthetic biology approaches to bacterial respiratory metabolism, with a special focus on the respiratory chain of the ethanologenic bacterium Zymomonas mobilis. Electron transport in Z. mobilis can serve as a model system of bacterial respiration with low oxidative phosphorylation efficiency. Its application for redox balancing and re…

0301 basic medicineHistologyAerobic bacterialcsh:Biotechnologyrespiratory chainBiomedical EngineeringRespiratory chainBioengineering02 engineering and technologyOxidative phosphorylationZymomonas mobilisMetabolic engineeringredox balance03 medical and health scienceslcsh:TP248.13-248.65RespirationBioprocessstress resistencebiologyenergy couplingChemistryZymomonas mobilis021001 nanoscience & nanotechnologybiology.organism_classificationElectron transport chain030104 developmental biologyBiochemistry0210 nano-technologymetabolic engineeringBiotechnologyFrontiers in Bioengineering and Biotechnology
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Translocation of Zymomonas mobilis pyruvate decarboxylase to periplasmic compartment for production of acetaldehyde outside the cytosol

2019

Abstract Acetaldehyde, a valuable commodity chemical, is a volatile inhibitory byproduct of aerobic fermentation in Zymomonas mobilis and in several other microorganisms. Attempting to improve acetaldehyde production by minimizing its contact with the cell interior and facilitating its removal from the culture, we engineered a Z. mobilis strain with acetaldehyde synthesis reaction localized in periplasm. For that, the pyruvate decarboxylase (PDC) was transferred from the cell interior to the periplasmic compartment. This was achieved by the construction of a Z. mobilis Zm6 PDC‐deficient mutant, fusion of PDC with the periplasmic signal sequence of Z. mobilis gluconolactonase, and the follow…

Recombinant Fusion Proteinslcsh:QR1-502macromolecular substancesAcetaldehydeMicrobiologyZymomonas mobilislcsh:Microbiologychemistry.chemical_compoundperiplasmZymomonasbiologypyruvate decarboxylaseZymomonas mobilisAcetaldehydeacetaldehyde productionhemic and immune systemsPeriplasmic spaceCompartment (chemistry)Original Articlesbiology.organism_classificationFusion proteinAerobiosisProtein TransportBiochemistrychemistryMetabolic EngineeringFermentationGluconolactonaseFermentationOriginal ArticlePyruvate decarboxylaseMicrobiologyOpen
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The Low Energy-Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway.

2015

Performing oxidative phosphorylation is the primary role of respiratory chain both in bacteria and eukaryotes. Yet, the branched respiratory chains of prokaryotes contain alternative, low energy-coupling electron pathways, which serve for functions other than oxidative ATP generation (like those of respiratory protection, adaptation to low-oxygen media, redox balancing, etc.), some of which are still poorly understood. We here demonstrate that withdrawal of reducing equivalents by the energetically uncoupled respiratory chain of the bacterium Zymomonas mobilis accelerates its fermentative catabolism, increasing the glucose consumption rate. This is in contrast to what has been observed in o…

Metabolic Processes0301 basic medicineRespiratory chainlcsh:MedicineBiochemistryOxidative PhosphorylationGlucose Metabolismlcsh:ScienceZymomonasMultidisciplinarybiologyOrganic CompoundsSimulation and ModelingMonosaccharidesChemical ReactionsCatabolismAerobiosisEnzymesChemistryBiochemistryPhysical SciencesCarbohydrate MetabolismOxidoreductasesOxidation-ReductionResearch Article030106 microbiologyCarbohydratesAcetaldehydeOxidative phosphorylationResearch and Analysis MethodsZymomonas mobilisElectron Transport03 medical and health sciencesOxidationEntner–Doudoroff pathwayDehydrogenasesOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsNADbiology.organism_classificationElectron transport chainKineticsGlucoseMetabolismFermentationEnzymologyFermentationlcsh:QFlux (metabolism)BacteriaPLoS ONE
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Improvement of acetaldehyde production in Zymomonas mobilis by engineering of Its aerobic metabolism

2019

Acetaldehyde is a valuable product of microbial biosynthesis, which can be used by the chemical industry as the entry point for production of various commodity chemicals. In ethanologenic microorganisms, like yeast or the bacterium Zymomonas mobilis, this compound is the immediate metabolic precursor of ethanol. In aerobic cultures of Z. mobilis, it accumulates as a volatile, inhibitory byproduct, due to the withdrawal of reducing equivalents from the alcohol dehydrogenase reaction by respiration. The active respiratory chain of Z. mobilis with its low energy-coupling efficiency is well-suited for regeneration of NAD+ under conditions when acetaldehyde, but not ethanol, is the desired catab…

Microbiology (medical)Cellular respirationlcsh:QR1-502Respiratory chainZymomonas mobilisMicrobiologylcsh:MicrobiologyMetabolic engineering03 medical and health scienceschemistry.chemical_compoundstoichiometric model030304 developmental biologyAlcohol dehydrogenaseOriginal Research2. Zero hunger0303 health sciencesEthanolbiology030306 microbiologyZymomonas mobilisNADH dehydrogenaseAcetaldehydebiology.organism_classificationmetabolomicschemistryBiochemistrybiology.proteinmetabolic engineeringacetaldehyde
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Aerobic catabolism and respiratory lactate bypass in Ndh-negative Zymomonas mobilis

2018

Ability to ferment in the presence of oxygen increases the robustness of bioprocesses and opens opportunity for novel industrial setups. The ethanologenic bacterium Zymomonas mobilis performs rapid and efficient anaerobic ethanol fermentation, yet its respiratory NADH dehydrogenase (Ndh)-deficient strain (ndh-) is known to produce ethanol with high yield also under oxic conditions. Compared to the wild type, it has a lower rate of oxygen consumption, and an increased expression of the respiratory lactate dehydrogenase (Ldh). Here we present a quantitative study of the product spectrum and carbon balance for aerobically growing ndh-. Ldh-deficient and Ldh-overexpressing ndh- strains were con…

0301 basic medicinelcsh:BiotechnologyEndocrinology Diabetes and Metabolism030106 microbiologyBiomedical EngineeringRespiratory chainBioethanolEthanol fermentationZymomonas mobilisArticle03 medical and health scienceschemistry.chemical_compoundlcsh:TP248.13-248.65Lactate dehydrogenaselcsh:QH301-705.5biologyCatabolismZymomonas mobilisNADH dehydrogenaseLactate dehydrogenaseNADH dehydrogenaseMetabolismRespiratory chainbiology.organism_classificationlcsh:Biology (General)chemistryBiochemistryOxidative stressbiology.proteinAnaerobic exerciseMetabolic Engineering Communications
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