0000000000425095

AUTHOR

Pentti Somerharju

showing 7 related works from this author

Partitioning of Pyrene-Labeled Phospho- and Sphingolipids between Ordered and Disordered Bilayer Domains

2004

AbstractHere we have studied how the length of the pyrene-labeled acyl chain (n) of a phosphatidylcholine, sphingomyelin, or galactosylceramide affects the partitioning of these lipids between 1), gel and fluid domains coexisting in bovine brain sphingomyelin (BB-SM) or BB-SM/spin-labeled phosphatidylcholine (PC) bilayers or 2), between liquid-disordered and liquid-ordered domains in BB-SM/spin-labeled PC/cholesterol bilayers. The partitioning behavior was deduced either from modeling of pyrene excimer/monomer ratio versus temperature plots, or from quenching of the pyrene monomer fluorescence by spin-labeled PC. New methods were developed to model excimer formation and pyrene lipid quenchi…

Macromolecular SubstancesMembrane FluidityLipid BilayersMolecular ConformationBiophysicsPhase Transition03 medical and health scienceschemistry.chemical_compoundMembrane MicrodomainsPhosphatidylcholineMembrane fluidityFluorometryLipid bilayerPhospholipids030304 developmental biologySphingolipids0303 health sciencesPyrenesMembranesQuenching (fluorescence)Staining and LabelingChemistry030302 biochemistry & molecular biologyTemperatureBiological membraneModels ChemicalBiochemistryDipalmitoylphosphatidylcholineLiposomesBiophysicsPyrenelipids (amino acids peptides and proteins)SphingomyelinBiophysical Journal
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Time-resolved fluorescence and fourier transform infrared spectroscopic investigations of lateral packing defects and superlattice domains in composi…

2003

Time-resolved fluorescence and Fourier transform infrared spectroscopies were used to investigate the lateral organization of lipids in compositionally uniform and fully equilibrated 1-palmitoyl-2-oleoyl-phosphatidylcholine/cholesterol (POPC/CHOL) liposomes prepared by a recently devised low-temperature trapping method. Independent fluorescence decay lifetime and rotational dynamics parameters of diphenylhexatriene (DPH) chain-labeled phosphatidylcholine (DPH-PC) in these liposomes were recovered from the time-resolved fluorescence measurements as a function of cholesterol molar fraction (X(CHOL)) at 23 degrees C. The results indicate significantly greater lifetime heterogeneity, shorter av…

DiphenylhexatrieneModels MolecularMacromolecular SubstancesMembrane FluidityLipid BilayersBiophysicsAnalytical chemistry010402 general chemistryMole fraction01 natural sciences03 medical and health scienceschemistry.chemical_compoundPhosphatidylcholineSpectroscopy Fourier Transform InfraredMembrane fluiditypolycyclic compoundsComputer SimulationLipid bilayerPOPCRotational correlation time030304 developmental biology0303 health sciencesLiposomeMembranestechnology industry and agricultureSignal Processing Computer-Assisted0104 chemical sciencesCrystallographyCholesterolSpectrometry FluorescencechemistryLiposomesPhosphatidylcholinesAnisotropylipids (amino acids peptides and proteins)AlgorithmsBiophysical journal
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Regulation of Calcium Channel Activity by Lipid Domain Formation in Planar Lipid Bilayers

2003

The sarcoplasmic reticulum channel (ryanodine receptor) from cardiac myocytes was reconstituted into planar lipid bilayers consisting of 1-palmitoyl-2-oleoyl-phosphatidylethanolamine (POPE) and 1-palmitoyl-2-oleoyl-phosphatidylcholine (POPC) in varying ratios. The channel activity parameters, i.e., open probability and average open time and its resolved short and long components, were determined as a function of POPE mole fraction (X(PE)) at 22.4 degrees C. Interestingly, all of these parameters exhibited a narrow and pronounced peak at X(PE) approximately 0.80. Differential scanning calorimetric measurements on POPE/POPC liposomes with increasing X(PE) indicated that the lipid bilayer ente…

Membrane FluidityProtein ConformationLipid BilayersBiophysicsAnalytical chemistryMolecular Conformation010402 general chemistryElectric Capacitance01 natural sciencesMembrane Potentials03 medical and health scienceschemistry.chemical_compoundStructure-Activity RelationshipProtein structureMembrane MicrodomainsChannels Receptors and TransportersMembrane fluidityLipid bilayer phase behaviorLipid bilayerPOPC030304 developmental biologyMembrane potential0303 health sciencesLiposomeEndoplasmic reticulumPhosphatidylethanolaminesMembranes ArtificialRyanodine Receptor Calcium Release Channel0104 chemical scienceschemistry13. Climate actionBiophysicsPhosphatidylcholineslipids (amino acids peptides and proteins)Calcium ChannelsIon Channel Gating
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The superlattice model of lateral organization of membranes and its implications on membrane lipid homeostasis.

2008

AbstractMost biological membranes are extremely complex structures consisting of hundreds of different lipid and protein molecules. According to the famous fluid-mosaic model lipids and many proteins are free to diffuse very rapidly in the plane of the membrane. While such fast diffusion implies that different membrane lipids would be laterally randomly distributed, accumulating evidence indicates that in model and natural membranes the lipid components tend to adopt regular (superlattice-like) distributions. The superlattice model, put forward based on such evidence, is intriguing because it predicts that 1) there is a limited number of allowed compositions representing local minima in mem…

Membrane FluidityMembrane lipidsBiophysicsDistributionMolecular dynamicsBiology010402 general chemistry01 natural sciencesBiochemistryModels BiologicalPolar membrane03 medical and health sciencesMembrane LipidsMembrane MicrodomainsMembrane fluidityAnimalsHomeostasisHumansComputer SimulationPhospholipaseLipid bilayer phase behaviorDomain030304 developmental biology0303 health sciencesMembranesMolecular StructureErythrocyte MembraneBiological membraneCell BiologyMembrane transportModels TheoreticalLipid MetabolismLipids0104 chemical sciencesCell biologyErythrocytePhospholipidCholesterolMembraneBiophysicsModelElasticity of cell membranesBiochimica et biophysica acta
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Cholesterol Modulates the Interaction of β-Amyloid Peptide with Lipid Bilayers

2009

The interaction of an amphiphilic, 40-amino acid beta-amyloid (Abeta) peptide with liposomal membranes as a function of sterol mole fraction (X(sterol)) was studied based on the fluorescence anisotropy of a site-specific membrane sterol probe, dehydroergosterol (DHE), and fluorescence resonance energy transfer (FRET) from the native Tyr-10 residue of Abeta to DHE. Without Abeta, peaks or kinks in the DHE anisotropy versus X(sterol) plot were detected at X(sterol) approximately 0.25, 0.33, and 0.53. Monomeric Abeta preserved these peaks/kinks, but oligomeric Abeta suppressed them and created a new DHE anisotropy peak at X(sterol) approximately 0.38. The above critical X(sterol) values coinci…

Time FactorsLipid BilayersMolecular Sequence DataBiophysicsPeptideFluorescence Polarization7. Clean energy03 medical and health scienceschemistry.chemical_compound0302 clinical medicineAlzheimer DiseaseErgosterolFluorescence Resonance Energy TransferAmino Acid SequenceLipid bilayer030304 developmental biologychemistry.chemical_classification0303 health sciencesLiposomeAmyloid beta-PeptidesChemistryCholesterolSterolPeptide FragmentsCrystallographyFörster resonance energy transferMembraneCholesterolCell BiophysicsTyrosinelipids (amino acids peptides and proteins)030217 neurology & neurosurgeryFluorescence anisotropyProtein BindingBiophysical Journal
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Acyl-Chain Mismatch Driven Superlattice Arrangements in DPPC/DLPC/Cholesterol Bilayers

2010

Fluorescence and infrared spectroscopy and cholesterol oxidase activity were employed to investigate the effect of phosphatidylcholine (PC) acyl chain length mismatch on the lateral organizations of lipids in liquid-ordered dipalmitoyl-PC/dilauroyl-PC/cholesterol (DPPC/DLPC/CHOL) bilayers. Plots of steady-state fluorescence emission anisotropy of diphenylhexatriene (DPH) labeled PC (DPH-PC) embedded in the DPPC/DLPC/CHOL bilayers revealed significant peaks at several DPPC mole fractions (Y(DPPC)) when the cholesterol mole fraction (X(CHOL)) was fixed to particular values. Analogously, the DPH-PC anisotropy peaked at several critical X(CHOL)'s when Y(DPPC) was fixed. Acyl chain C-H and C hor…

Diphenylhexatriene12-DipalmitoylphosphatidylcholineCholesterol oxidaseSuperlatticeLipid BilayersAnalytical chemistryInfrared spectroscopyFluorescence Polarization010402 general chemistryMole fraction01 natural sciencesArticle03 medical and health scienceschemistry.chemical_compoundPhosphatidylcholineSpectroscopy Fourier Transform Infraredpolycyclic compoundsMaterials ChemistryPhysical and Theoretical ChemistryLipid bilayer030304 developmental biology0303 health sciencesCholesterol OxidaseCholesteroltechnology industry and agriculture0104 chemical sciencesSurfaces Coatings and FilmsCrystallographyCholesterolchemistryCholesterol oxidase activity13. Climate actionAcyl chainPhosphatidylcholineslipids (amino acids peptides and proteins)Fluorescence anisotropyThe Journal of Physical Chemistry B
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Calorimetric Behavior of Phosphatidylcholine/Phosphatidylethanolamine Bilayers is Compatible with the Superlattice Model

2012

Differential scanning calorimetry was used to study the phase behavior of binary lipid bilayers consisting of phosphatidylcholine (PC) and phosphatidylethanolamine (PE) of varying acyl chain length. A two-state transition model was used to resolve the individual transition components, and the two-state transition enthalpy, the relative enthalpy, and the transition temperature of each component were plotted as a function of composition. Intriguingly, abrupt changes in these thermodynamic parameters were observed at or close to many "critical" X(PE) values predicted by the superlattice model proposing that phospholipids with different headgroups tend to adopt regular rather than random latera…

Models MolecularSuperlatticeLipid BilayersEnthalpyAnalytical chemistryThermodynamics02 engineering and technologyCalorimetryArticle03 medical and health scienceschemistry.chemical_compoundDifferential scanning calorimetryPhase (matter)PhosphatidylcholineMaterials ChemistryTransition TemperaturePhysical and Theoretical ChemistryLipid bilayer030304 developmental biologyPhysics::Biological Physics0303 health sciencesCalorimetry Differential ScanningChemistryPhosphatidylethanolaminesTransition temperature021001 nanoscience & nanotechnologySurfaces Coatings and FilmsPhosphatidylcholinesThermodynamics0210 nano-technologyThe Journal of Physical Chemistry B
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