0000000000435415
AUTHOR
Karen Meusemann
showing 43 related works from this author
Supplementary TextS26 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
This Supplement includes Supplementary Methods and Results; Table S4; List of Captions for Supplementary Tables and Supplementary Figures; List of Supplementary Archives deposited at DRYAD and Supplementary References.
Supplementary Information from Oxidative stress and senescence in social insects—a significant but inconsistent link?
2021
Additional methods tables and figures
Additional file 1: Figure S1. of Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2016
Tracing the evolutionary origin of CTCF with ancestral state reconstruction. Figure S2. Tracing the evolutionary origin of Su(Hw) with ancestral state reconstruction. Figure S3. Tracing the evolutionary origin of CP190 with ancestral state reconstruction. Figure S4. Tracing the evolutionary origin of GAF with ancestral state reconstruction. Figure S5. Tracing the evolutionary origin of Pita with ancestral state reconstruction. Figure S6. Tracing the evolutionary origin of Mod(mdg4) with ancestral state reconstruction. Figure S7. Tracing the evolutionary origin of Zw5 with ancestral state reconstruction. Figure S8. Phylogenetic gene tree of CTCF orthologs. Figure S9. Phylogenetic gene tree o…
Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects : Insect insulator proteins.
2016
Background Body plan development in multi-cellular organisms is largely determined by homeotic genes. Expression of homeotic genes, in turn, is partially regulated by insulator binding proteins (IBPs). While only a few enhancer blocking IBPs have been identified in vertebrates, the common fruit fly Drosophila melanogaster harbors at least twelve different enhancer blocking IBPs. We screened recently compiled insect transcriptomes from the 1KITE project and genomic and transcriptomic data from public databases, aiming to trace the origin of IBPs in insects and other arthropods. Results Our study shows that the last common ancestor of insects (Hexapoda) already possessed a substantial number …
Supplementary Figures from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
This supplement includes Supplementary Figure S1-S17.
Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects.
2021
The exceptional longevity of social insect queens despite their lifelong high fecundity remains poorly understood in ageing biology. To gain insights into the mechanisms that might underlie ageing in social insects, we compared gene expression patterns between young and old castes (both queens and workers) across different lineages of social insects (two termite, two bee and two ant species). After global analyses, we paid particular attention to genes of the insulin/insulin-like growth factor 1 signalling (IIS)/target of rapamycin (TOR)/juvenile hormone (JH) network, which is well known to regulate lifespan and the trade-off between reproduction and somatic maintenance in solitary insects…
Oxidative stress and senescence in social insects: A significant but inconsistent link?
2021
The life-prolonging effects of antioxidants have long entered popular culture, but the scientific community still debates whether free radicals and the resulting oxidative stress negatively affect longevity. Social insects are intriguing models for analysing the relationship between oxidative stress and senescence because life histories differ vastly between long-lived reproductives and the genetically similar but short-lived workers. Here, we present the results of an experiment on the accumulation of oxidative damage to proteins, and a comparative analysis of the expression of 20 selected genes commonly involved in managing oxidative damage, across four species of social insects: a termit…
Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2016
BACKGROUND: Body plan development in multi-cellular organisms is largely determined by homeotic genes. Expression of homeotic genes, in turn, is partially regulated by insulator binding proteins (IBPs). While only a few enhancer blocking IBPs have been identified in vertebrates, the common fruit fly Drosophila melanogaster harbors at least twelve different enhancer blocking IBPs. We screened recently compiled insect transcriptomes from the 1KITE project and genomic and transcriptomic data from public databases, aiming to trace the origin of IBPs in insects and other arthropods. RESULTS: Our study shows that the last common ancestor of insects (Hexapoda) already possessed a substantial numbe…
Additional file 1: Figure S1. of Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2016
Tracing the evolutionary origin of CTCF with ancestral state reconstruction. Figure S2. Tracing the evolutionary origin of Su(Hw) with ancestral state reconstruction. Figure S3. Tracing the evolutionary origin of CP190 with ancestral state reconstruction. Figure S4. Tracing the evolutionary origin of GAF with ancestral state reconstruction. Figure S5. Tracing the evolutionary origin of Pita with ancestral state reconstruction. Figure S6. Tracing the evolutionary origin of Mod(mdg4) with ancestral state reconstruction. Figure S7. Tracing the evolutionary origin of Zw5 with ancestral state reconstruction. Figure S8. Phylogenetic gene tree of CTCF orthologs. Figure S9. Phylogenetic gene tree o…
Additional file 2: Table S1. of Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2016
BUSCO assessment of the 1KITE transcriptomes. (XLS 21 kb)
Additional file 3: Table S2. of Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2016
NCBI accession numbers of transcriptome and genome data. (XLS 35 kb)
Additional file 3: Table S2. of Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2016
NCBI accession numbers of transcriptome and genome data. (XLS 35 kb)
Table S5 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S1 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM 1.
Table S16 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S6 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S20 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S12 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S3 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S10 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S26 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S24 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Ox stress Bayes from Oxidative stress and senescence in social insects—a significant but inconsistent link?
2021
zip file containing the original data, the r-script and the r-save files.
Table S3 from Oxidative stress and senescence in social insects—a significant but inconsistent link?
2021
Details of genes identified in our four study species following Corona and colleagues (Corona et al. 2006).
Table S5 A, B, C from Oxidative stress and senescence in social insects—a significant but inconsistent link?
2021
Correlation and p-values between the 20 antioxidant genes; PC axis that separated castes in C. secundus, A. mellifera capensis and E. viridissima; PC axis that separated young and old individuals of P. punctata and E. viridissima.
Table S15 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S19 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S4 A, B from Oxidative stress and senescence in social insects—a significant but inconsistent link?
2021
Genes unambiguously identified in our study species; Normalised read counts identified in our study species
Table S2 from Oxidative stress and senescence in social insects—a significant but inconsistent link?
2021
Genes involved in the enzymatic antioxidant system following Corona and Robinson (2006) identified in Apis, Anopheles and/or Drosophila.
Table S7 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S11 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S2 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S17 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S21 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S23 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Data from: Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2017
Background Body plan development in multi-cellular organisms is largely determined by homeotic genes. Expression of homeotic genes, in turn, is partially regulated by insulator binding proteins (IBPs). While only a few enhancer blocking IBPs have been identified in vertebrates, the common fruit fly Drosophila melanogaster harbors at least twelve different enhancer blocking IBPs. We screened recently compiled insect transcriptomes from the 1KITE project and genomic and transcriptomic data from public databases, aiming to trace the origin of IBPs in insects and other arthropods. Results Our study shows that the last common ancestor of insects (Hexapoda) already possessed a substantial number …
Table S25 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S13 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Additional file 2: Table S1. of Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects
2016
BUSCO assessment of the 1KITE transcriptomes. (XLS 21 kb)
Table S9 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S22 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S18 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.
Table S8 from Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects
2021
Overview of all Supplementary tables provided as separate Excel files, except Table S4 which is included in ESM1.