Whole-genome analysis reveals contrasting relationships among nuclear and mitochondrial genomes between three sympatric bat species

Understanding mechanisms involved in speciation can be challenging, especially when hybridization or introgression blurs species boundaries. In bats resolving relationships of some closely related groups has proven difficult due subtle interspecific variation both in morphometrics and molecular datasets. The endemic South American Histiotus bats, currently considered a sub-genus of Eptesicus, harbor unresolved phylogenetic relationships and of those is a trio consisting of two closely related species: Eptesicus (Histiotus) macrotus and E. (H.) montanus, and their relationship with a third, E. (H.) magellanicus. The three sympatric species bear marked resemblance to each other, but can be di…