0000000000546908

AUTHOR

Hubert Charles

0000-0002-0809-4705

showing 2 related works from this author

The transposable element-rich genome of the cereal pest Sitophilus oryzae

2021

AbstractBackgroundThe rice weevil Sitophilus oryzae is one of the most important agricultural pests, causing extensive damage to cereal in fields and to stored grains. S. oryzae has an intracellular symbiotic relationship (endosymbiosis) with the Gram-negative bacterium Sodalis pierantonius and is a valuable model to decipher host-symbiont molecular interactions.ResultsWe sequenced the Sitophilus oryzae genome using a combination of short and long reads to produce the best assembly for a Curculionidae species to date. We show that S. oryzae has undergone successive bursts of transposable element (TE) amplification, representing 72% of the genome. In addition, we show that many TE families a…

2. Zero hungerGeneticsTransposable element0303 health sciencesSodalisfood.ingredientEndosymbiosisbusiness.industrySitophilusPest controlfood and beveragesBiologybiology.organism_classificationGenome03 medical and health sciences0302 clinical medicineRice weevilfoodPEST analysisbusiness030217 neurology & neurosurgery030304 developmental biology
researchProduct

A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations.

2011

International audience; Buchnera aphidicola is an obligate symbiotic bacterium that sustains the physiology of aphids by complementing their exclusive phloem sap diet. In this study, we reappraised the transport function of different Buchnera strains, from the aphids Acyrthosiphon pisum, Schizaphis graminum, Baizongia pistaciae and Cinara cedri, using the re-annotation of their transmembrane proteins coupled with an exploration of their metabolic networks. Although metabolic analyses revealed high interdependencies between the host and the bacteria, we demonstrate here that transport in Buchnera is assured by low transporter diversity, when compared to free-living bacteria, being mostly bas…

multidisciplinary scienceslcsh:MedicinePlant ScienceinterdépendanceBiochemistryTransmembrane Transport ProteinsBacterial Physiologylcsh:ScienceIntegral membrane proteinGeneticsbactérie0303 health sciencesPlant PestsMultidisciplinaryMicroscopy ConfocalbiologyMembrane transport protein030302 biochemistry & molecular biologybuchnera aphidicolamicroscopy confocalGenomicsHydrogen-Ion ConcentrationTransmembrane proteinFunctional GenomicsBiochemistrysymbiosis geneticsMetabolic PathwaysMetabolic Networks and PathwaysResearch Articlecell membrane ultrastructurescience and technologyMicrobiology03 medical and health sciencesMetabolic NetworksBuchneraAnimalsSymbiosisBiology030304 developmental biologyObligateCell Membranelcsh:RProteinsComputational BiologyMembrane Transport ProteinsBiological TransportBacteriologyPlant Pathologybiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumTransmembrane ProteinsaphidsMESH: SymbioseMetabolismMembrane proteinGenes Bacterialbiology.proteinlcsh:QBuchnerabuchnera aphidicola;aphids;microscopy confocal;symbiosis genetics;cell membrane ultrastructure;multidisciplinary sciences;science and technologyFunction (biology)[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisPLoS ONE
researchProduct