0000000000928636
AUTHOR
A. Moya
A Dirichlet Autoregressive Model for the Analysis of Microbiota Time-Series Data
Growing interest in understanding microbiota dynamics has motivated the development of different strategies to model microbiota time series data. However, all of them must tackle the fact that the available data are high-dimensional, posing strong statistical and computational challenges. In order to address this challenge, we propose a Dirichlet autoregressive model with time-varying parameters, which can be directly adapted to explain the effect of groups of taxa, thus reducing the number of parameters estimated by maximum likelihood. A strategy has been implemented which speeds up this estimation. The usefulness of the proposed model is illustrated by application to a case study.
Intra- and intergenotypic competition in Drosophila melanogaster: effects of density on larval survival and rate of development
We have examined the effects of density and frequency in the larval competition of Drosophila melanogaster by measuring three fitness components: viability (V), mean development time (MDT) and a combination of these two (E). We have detected (contrary to most published results) non-linear effects of density in single-genotype cultures; in addition, different functions are required to describe the density effects below and above the optimal density. Frequency has also non-linear effects in the two-genotype cultures. Only one polymorphic equilibrium frequency, which is stable, occurs with respect to V; but two polymorphic equilibria, one stable and one unstable, exist with respect to E. The r…
A giant exoplanet orbiting a very-low-mass star challenges planet formation models
Surveys have shown that super-Earth and Neptune-mass exoplanets are more frequent than gas giants around low-mass stars, as predicted by the core accretion theory of planet formation. We report the discovery of a giant planet around the very-low-mass star GJ 3512, as determined by optical and near-infrared radial-velocity observations. The planet has a minimum mass of 0.46 Jupiter masses, very high for such a small host star, and an eccentric 204-day orbit. Dynamical models show that the high eccentricity is most likely due to planet-planet interactions. We use simulations to demonstrate that the GJ 3512 planetary system challenges generally accepted formation theories, and that it puts con…
Molecular evolution of aphids and their primary (Buchnera sp.) and secondary endosymbionts: Implications for the role of symbiosis in insect evolution
Aphids maintain an obligate, endosymbiotic association with Buchnera sp., a bacterium closely related to Escherichia coli. Bacteria are housed in specialized cells of organ-like structures called bacteriomes in the hemocoel of the aphid and are maternally transmitted. Phylogenetic studies have shown that the association had a single origin, dated about 200-250 million years ago, and that host and endosymbiont lineages have evolved in parallel since then. However, the pattern of deepest branching within the aphid family remains unsolved, which thereby hampers an appraisal of, for example, the role played by horizontal gene transfer in the early evolution of Buchnera. The main role of Buchner…
Multiperiodic pulsations in the Be stars NW Serpentis and V1446 Aquilae
Aims.We present accurate photometric time series of two Be stars: NW Ser and V1446 Aql . Both stars were observed at the Observatorio de Sierra Nevada (Granada) in July 2003 with an automatic four-channel Strömgren photometer. We also present a preliminary theoretical study showing that the periodic variations exhibited by these stars can be due to pulsation. Methods.An exhaustive Fourier analysis together with a least-square fitting has been carried out on the time series for all four Strömgren bands. Several independent frequencies and non-periodic trends explain most of the variance. A theoretical non-adiabatic code applied to stellar models for these stars shows that g-modes are unstabl…