0000000001213243
AUTHOR
Edward Chaum
showing 15 related works from this author
AUTOMATIC QUALITY ENHANCEMENT AND NERVE FIBRE LAYER ARTEFACTS REMOVAL IN RETINA FUNDUS IMAGES BY OFF AXIS IMAGING
2011
International audience; Retinal fundus images acquired with non-mydriatic digital fundus cameras are a versatile tool for the diagnosis of various retinal diseases. Even with relative ease of use, the images produced sometimes suffer from reflectance artefacts mainly due to the nerve fibre layer (NFL) or camera lens related reflections. We propose a technique that employs multiple fundus images to obtain a single higher quality image without these reflectance artefacts, which also compensates for a suboptimal illumination. The removal of bright artefacts, can have great benefits for the reduction of false positives in the detection of retinal lesions by automatic systems or manual inspectio…
Bright Retinal Lesions Detection using Color Fundus Images Containing Reflective Features
2009
Recently, the research community has developed many techniques to detect and diagnose diabetic retinopathy with retinal fundus images. This is a necessary step for the implementation of a large scale screening effort in rural areas where ophthalmologists are not available. In the United States of America, the incidence of diabetes is increasing among the young population. Retina fundus images of patients younger than 20 years old present a high amount of reflectance due to the Nerve Fibre Layer (NFL). Generally, the younger the patient the more the reflectance is visible. We are not aware of algorithms able to explicitly deal with this type of artifact.
Microaneurysms detection with the radon cliff operator in retinal fundus images
2010
ABSTRACT Diabetic Retinopathy (DR) is one of the leading causes of blindness in the industrialized world. Early detection is thekey in providing effective treatment. However, the current number of trained eye care specialists is inadequate to screenthe increasing number of diabetic patients. In recent years, automated and semi-automated systems to detect DR withcolor fundus images have been developedwith encouraging,but not fully satisfactory results. In this study we present theinitial results of a new techniquefor the detection and localization of microaneurysms,an early sign of DR. The algorithmis based on three steps: candidates selection, the actual microaneurysms detection and a Þnal …
Exudate Segmentation on Retinal Atlas Space
2013
International audience; Diabetic macular edema is characterized by hard exudates. Presence of such exudates cause vision loss in the affected areas. We present a novel approach of segmenting exudates for screening and follow-ups by building an ethnicity based statistical atlas. The chromatic distribution in such an atlas gives a good measure of probability of the pixels belonging to the healthy retinal pigments or to the abnormalities (like lesions, imaging artifacts etc.) in the retinal fundus image. Post-processing schemes are introduced in this paper for the enhancement of the edges of such exudates for final segmentation and to separate lesion from false positives. A sensitivity(recall)…
Validating retinal fundus image analysis algorithms: issues and a proposal.
2013
This paper concerns the validation of automatic retinal image analysis (ARIA) algorithms. For reasons of space and consistency, we concentrate on the validation of algorithms processing color fundus camera images, currently the largest section of the ARIA literature. We sketch the context (imaging instruments and target tasks) of ARIA validation, summarizing the main image analysis and validation techniques. We then present a list of recommendations focusing on the creation of large repositories of test data created by international consortia, easily accessible via moderated Web sites, including multicenter annotations by multiple experts, specific to clinical tasks, and capable of running …
Exudate-based diabetic macular edema detection in fundus images using publicly available datasets
2010
International audience; Diabetic macular edema (DME) is a common vision threatening complication of diabetic retinopathy. In a large scale screening environment DME can be assessed by detecting exudates (a type of bright lesions) in fundus images. In this work, we introduce a new methodology for diagnosis of DME using a novel set of features based on colour, wavelet decomposition and automatic lesion segmentation. These features are employed to train a classifier able to automatically diagnose DME through the presence of exudation. We present a new publicly available dataset with ground-truth data containing 169 patients from various ethnic groups and levels of DME. This and other two publi…
Textureless macula swelling detection with multiple retinal fundus images
2011
Retinal fundus images acquired with nonmydriatic digital fundus cameras are versatile tools for the diagnosis of various retinal diseases. Because of the ease of use of newer camera models and their relatively low cost, these cameras can be employed by operators with limited training for telemedicine or point-of-care (PoC) applications. We propose a novel technique that uses uncalibrated multiple-view fundus images to analyze the swelling of the macula. This innovation enables the detection and quantitative measurement of swollen areas by remote ophthalmologists. This capability is not available with a single image and prone to error with stereo fundus cameras. We also present automatic alg…
Statistical atlas based exudate segmentation
2013
Diabetic macular edema (DME) is characterized by hard exudates. In this article, we propose a novel statistical atlas based method for segmentation of such exudates. Any test fundus image is first warped on the atlas co-ordinate and then a distance map is obtained with the mean atlas image. This leaves behind the candidate lesions. Post-processing schemes are introduced for final segmentation of the exudate. Experiments with the publicly available HEI-MED data-set shows good performance of the method. A lesion localization fraction of 82.5% at 35% of non-lesion localization fraction on the FROC curve is obtained. The method is also compared to few most recent reference methods.
Microaneurysm detection with radon transform-based classification on retina images.
2012
The creation of an automatic diabetic retinopathy screening system using retina cameras is currently receiving considerable interest in the medical imaging community. The detection of microaneurysms is a key element in this effort. In this work, we propose a new microaneurysms segmentation technique based on a novel application of the radon transform, which is able to identify these lesions without any previous knowledge of the retina morphological features and with minimal image preprocessing. The algorithm has been evaluated on the Retinopathy Online Challenge public dataset, and its performance compares with the best current techniques. The performance is particularly good at low false p…
AUTOMATIC RETINA EXUDATES SEGMENTATION WITHOUT A MANUALLY LABELLED TRAINING SET
2011
International audience; Diabetic macular edema (DME) is a common vision threatening complication of diabetic retinopathy. In a large scale screening environment DME can be assessed by detecting exudates (a type of bright lesions) in fundus images. In this work, two new methods for the detection of exudates are presented. The methods do not require a lesion training set so the need to ground-truth data is avoided with significant time savings and independence from human error. We evaluate our algorithm with a new publicly available dataset from various ethnic groups and levels of DME. Also, we compare our results with two recent exudate segmentation algorithms on the same dataset. In all of …
Steerable wavelet transform for atlas based retinal lesion segmentation
2013
International audience; Computer aided diagnosis and follow up can help in prevention and treatment of diabetes and its related complications. Screening of diabetes related disease in the eyes is done by a special low cost fundus camera. A follow up of the patients visiting at di fferent time intervals for screening brings us to the problem of image analysis for change detection and its cost per patient. It is very likely that human annotations for the lesions may be erroneous and often time consuming. Since the ethnic background plays a signi cant role in retinal pigment epithelium, visibility of the choroidal vasculature and overall retinal luminance in patients and retinal images, an eth…
Automated Detection of Microaneurysms Using Scale-Adapted Blob Analysis and Semi-Supervised Learning
2014
International audience; Despite several attempts, automated detection of microaneurysm (MA) from digital fundus images still remains to be an open issue. This is due to the subtle nature of MAs against the surrounding tissues. In this paper, the microaneurysm detection problem is modeled as finding interest regions or blobs from an image and an automatic local-scale selection technique is presented. Several scale-adapted region descriptors are then introduced to characterize these blob regions. A semi-supervised based learning approach, which requires few manually annotated learning examples, is also proposed to train a classifier to detect true MAs. The developed system is built using only…
Automated detection of microaneurysms using robust blob descriptors
2013
International audience; Microaneurysms (MAs) are among the first signs of diabetic retinopathy (DR) that can be seen as round dark-red structures in digital color fundus photographs of retina. In recent years, automated computer-aided detection and diagnosis (CAD) of MAs has attracted many researchers due to its low-cost and versatile nature. In this paper, the MA detection problem is modeled as finding interest points from a given image and several interest point descriptors are introduced and integrated with machine learning techniques to detect MAs. The proposed approach starts by applying a novel fundus image contrast enhancement technique using Singular Value Decomposition (SVD) of fun…
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1
2021
Contains fulltext : 232759.pdf (Publisher’s version ) (Closed access) In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to…
Autophagy
2021
In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to provide…