0000000001227712

AUTHOR

Joanna Ziemska-legiecka

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PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins

2020

Abstract Low complexity regions (LCRs) in protein sequences are characterized by a less diverse amino acid composition compared to typically observed sequence diversity. Recent studies have shown that LCRs may co-occur with intrinsically disordered regions, are highly conserved in many organisms, and often play important roles in protein functions and in diseases. In previous decades, several methods have been developed to identify regions with LCRs or amino acid bias, but most of them as stand-alone applications and currently there is no web-based tool which allows users to explore LCRs in protein sequences with additional functional annotations. We aim to fill this gap by providing PlaToL…

Sequence analysisAcademicSubjects/SCI00010Protein domainComputational biologyBiologyDomain (software engineering)Computer graphics03 medical and health sciencesAnnotationProtein DomainsSequence Analysis ProteinGeneticsComputer GraphicsHumansAmino Acids030304 developmental biology0303 health sciencesIntersection (set theory)030302 biochemistry & molecular biologyMembrane ProteinsProteinsMolecular Sequence AnnotationVisualizationMolecular Sequence AnnotationWeb Server IssueSoftwareNucleic Acids Research
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