0000000001242077
AUTHOR
Christelle Tougard
Microevolutionary relationships between phylogeographical history, climate change and morphological variability in the common vole (Microtus arvalis) across France
Aim In this study, we analyse microevolutionary processes in common voles (Microtus arvalis) through the investigation of tooth morphological structure, in order to assess the relative impact of climate and phylogeographical history. Microevolutionary studies have shown that climate change may play a role in both population phylogeography and phenotypic differentiation. However, relatively little is known about the precise relationship between phylogeography and phenotypic variability and about how organisms respond to climate change. Location France, from sea level to the Alps (5 to > 2300 m a.s.l.). Methods This morphological analysis is based on first lower molar measurements from 16 geo…
Pleistocene paleoenvironmental reconstructions and mammalian evolution in South-East Asia: focus on fossil faunas from Thailand.
16 pages; International audience; Mammalian faunal studies have provided various clues for a better reconstruction of hominid Quaternary paleoenvironments. Inthis work, two methods were used: (1) the cenogram method, based on a graphical representation of the mammalian communitystructure, and (2) the species richness of murine rodents to estimate climatic parameters. These methods were applied to Middle andLate Pleistocene mammalian faunas of South-East Asia, from South China to Indonesia. Special emphasis was laid on a fauna fromnorth-east Thailand dated back to approximately 170,000 years (i.e. a glacial period). This Thai fauna seems characteristic of aslightly open forested environment …
Exploring phylogeography and species limits in the Altai vole (Rodentia: Cricetidae)
Natural hybridization between species is not a rare event. In arvicoline rodents, hybridization is known to occur in the wild and/or in captivity. In the Microtus arvalis group, cytogenetic studies revealed that there were two distinct chromosomal forms (2n = 46 but a different fundamental number of autosomes). These forms have been attributed to two cryptic species: the common (arvalis) and Altai (obscurus) voles. Recently, individuals with intermediate karyotypes (F1 and backcrosses) were discovered in central European Russia, and, for this reason, other studies have regarded obscurus and arvalis as conspecific. In the present study, to address the question of the species limits in the Al…
Ancient DNA evidence for the loss of a highly divergent brown bear clade during historical times
The genetic diversity of present-day brown bears (Ursus arctos) has been extensively studied over the years and appears to be geographically structured into five main clades. The question of the past diversity of the species has been recently addressed by ancient DNA studies that concluded to a relative genetic stability over the last 35,000 years. However, the post-last glacial maximum genetic diversity of the species still remains poorly documented, notably in the Old World. Here, we analyse Atlas brown bears, which became extinct during the Holocene period. A divergent brown bear mitochondrial DNA lineage not present in any of the previously studied modern or ancient bear samples was unc…
Evolutionary history of two allopatric Terricola species (Arvicolinae, Rodentia) from molecular, morphological, and palaeontological data
To investigate the phylogenetic and phylogeographical relationships of arvicolines, we use several Western European ground voles. More particularly, our study is focused on Microtus (Terricola) savii and M. (T.) pyrenaicus. These two allopatric species are usually considered as having originated from the same ancestor, possibly M. (T.) mariaclaudiae. We propose molecular and morphological approaches: nucleotidic data from the mitochondrial cytochrome b and 12S rRNA genes and global morphological analyses from the first lower molar. Four other Terricola species (multiplex, lusitanicus, duodecimcostatus, subterraneus) were added to the data set for both analyses, and two other vole species (C…
Molecular phylogeny of the extinct giant deer, Megaloceros giganteus.
a Centre de Genetique Moleculaire et Cellulaire (CGMC), CNRS UMR 5534, Universite Claude Bernard Lyon 1, Villeurbanne, France b Laboratoire d’Anthropologie des Populations du Passe, CNRS UMR 5199 PACEA, Universite Bordeaux 1, Talence, France c UCD School of Biology and Environmental Science, UCD, BelWeld, Dublin 4, Ireland d Laboratoire d’Ecologie des Hydrosystemes Fluviaux, CNRS UMR 5023, Universite Claude Bernard Lyon 1, Villeurbanne, France e Biogeosciences-Dijon, CNRS UMR 5561, Universite de Bourgogne, Centre des Sciences de la Terre, Dijon, France f Department of Palaeontology, Royal Belgian Institute of Natural Sciences, Brussels, Belgium g Department of Biology, University College Lo…
Redécouverte d'une faune pléistocène dans les remplissages karstiques de Tam Hang au Laos : premiers résultats.
12 pages; The discovery of a Pleistocene fauna in karstic fills at TamHang in Laos: preliminary results. TamHang, located in northeastern Laos, in the Hua Pan province, is a reference site not only for its numerous archaeological and human remains, but also for its two faunal assemblages, whose composition suggests different dating in the Pleistocene. Discovered in 1934 by Jacques Fromaget, a new excavation of the site has been undertaken in 2003. During this campaign, at Tam Hang south, 575 isolated teeth of mammals were extracted from a deep layer of calcareous breccia. This assemblage corresponds to that one described by Arambourg and Fromaget [C. Arambourg, J. Fromaget, Le gisement quat…
New insight into the colonization processes of common voles: inferences from molecular and fossil evidence.
Biologie et Gestion des Populations, Campus International de Baillarguet, Montferrier/Lez, FranceElucidating the colonization processes associated with Quaternary climatic cycles is important in order to understand the distribution of biodiversity and the evolutionary potential of temperate plant and animal species. In Europe, general evolutionary scenarios have been defined from genetic evidence. Recently, these scenarios have been challenged with genetic as well as fossil data. The origins of the modern distributions of most temperate plant and animal species could predate the Last Glacial Maximum. The glacial survival of such populations may have occurred in either southern (Mediterranea…
Mitochondrial DNA Gene Diversity and Morphological Variability of the Common Vole (Microtus arvalis) in France
International audience
Brown trout (Salmo trutta L.) high genetic diversity around the Tyrrhenian Sea as revealed by nuclear and mitochondrial markers
The brown trout (Salmo trutta L.) is widely distributed all around Europe but its natural diversity is threatened by massive stocking with Atlantic domestic strains. Describing the remaining natural genetic diversity and the proportion of domestic hatchery strains in rivers is a prerequisite for smart conservation. The high genetic diversity of brown trout populations around the Tyrrhenian Sea is well known. Use of twelve microsatellites has allowed description of the natural genetic structure of populations and detection of the consequences of stocking. Mitochondrial DNA control region sequences and the LDH-C1* gene enabled placement of each population into one of the six mitochondrial and…
Morphology and genetics reveal an intriguing pattern of differentiation at a very small geographic scale in a bird species, the forest thrush Turdus lherminieri.
12 pages; International audience; Mobile organisms are expected to show population differentiation only over fairly large geographical distances. However, there is growing evidence of discrepancy between dispersal potential and realized gene flow. Here we report an intriguing pattern of differentiation at a very small spatial scale in the forest thrush (Turdus lherminieri), a bird species endemic to the Lesser Antilles. Analysis of 331 individuals from 17 sampling sites distributed over three islands revealed a clear morphological and genetic differentiation between these islands isolated by 40-50 km. More surprisingly, we found that the phenotypic divergence between the two geographic zone…
Specific Identification of the Extinct Population of Sturgeons from the Rhône river by Sequencing of mtDNA from Bone Remains (Jardin d'Hiver, Arles, France, 6th to 2nd century BC.)
XIV th ICAZ Remains Working Group Meeting; Sturgeon lived in the Rhöne river (France) until its complete extinction in the mid 1970's. Usually attributed to Acipenser sturio, it disappeared without certitude about species identity and about possible sympatry between Acipenser sturio and Acipenser naccarii as it occured in the Pô (Italy) and Guadalquivir (Spain) rivers. Genetic analyses on several sturgeon bone remains from the Arles' Jardin d'Hiver collection have been carried out to solve this question. These remains belong to sturgeons caught in the Rhône river. The mitochondrial DNA (cytochrome b) sequences clearly show that A. sturio lived in this river. Morphological comparisons betwee…
Rodents and palaeogenetics: new perspectives.
10 pages; Rodents are the most diversified mammalian order (484 extant genera including 2277 species), and they have a worldwide distribution. Palaeontological, morphological and molecular data have greatly helped to resolve their systematics and evolutionary history. However, some discrepancies remain between palaeontologists and molecular biologists. New techniques in molecular biology, and especially in palaeogenetics, allow us to have direct access to the hereditary material of extinct organisms, and they can compensate for some morphological limits. Unfortunately, few studies are dealing with rodent palaeogenetics, despite the amount of museum and fossil material available. Here, we re…
Data from: Morphology and genetics reveal an intriguing pattern of differentiation at a very small geographic scale in a bird species, the forest thrush Turdus lherminieri
Mobile organisms are expected to show population differentiation only over fairly large geographical distances. However, there is growing evidence of discrepancy between dispersal potential and realized gene flow. Here we report an intriguing pattern of differentiation at a very small spatial scale in the forest thrush (Turdus lherminieri), a bird species endemic to the Lesser Antilles. Analysis of 331 individuals from 17 sampling sites distributed over three islands revealed a clear morphological and genetic differentiation between these islands isolated by 40–50 km. More surprisingly, we found that the phenotypic divergence between the two geographic zones of the island of Guadeloupe was …