0000000001290569

AUTHOR

Fiammetta Alagna

0000-0003-1878-2023

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Computational annotation of genes differentially expressed along olive fruit development

2009

Abstract Background Olea europaea L. is a traditional tree crop of the Mediterranean basin with a worldwide economical high impact. Differently from other fruit tree species, little is known about the physiological and molecular basis of the olive fruit development and a few sequences of genes and gene products are available for olive in public databases. This study deals with the identification of large sets of differentially expressed genes in developing olive fruits and the subsequent computational annotation by means of different software. Results mRNA from fruits of the cv. Leccino sampled at three different stages [i.e., initial fruit set (stage 1), completed pit hardening (stage 2) a…

DNA PlantBERRY DEVELOPMENTGenomicsComputational biologyPlant ScienceBiologyGenes PlantGenomeGene Expression Regulation PlantOlealcsh:BotanyBotanyCluster AnalysisFUNCTIONAL GENOMICSGene Regulatory NetworksKEGGBlast2GOGene LibraryExpressed sequence tagGene Expression ProfilingComputational BiologySequence Analysis DNAGRAPE BERRIESREDUCTASE GENEEST DATABASEOLEA-EUROPAEAlcsh:QK1-989Gene expression profilingOLEA-EUROPAEA; SEQUENCE TAGS; TRANSIENT EXPRESSION; FUNCTIONAL GENOMICS; BERRY DEVELOPMENT; POTENTIAL ROLES; DESATURASE GENE; REDUCTASE GENE; GRAPE BERRIES; EST DATABASESuppression subtractive hybridizationFruitPOTENTIAL ROLESDESATURASE GENETRANSIENT EXPRESSIONFunctional genomicsMetabolic Networks and PathwaysSEQUENCE TAGSResearch ArticleBMC Plant Biology
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