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RESEARCH PRODUCT
BioImageXD: an open, general-purpose and high-throughput image-processing platform
Silja TiittaVarpu MarjomäkiDaniel J. WhiteMikko KarjalainenJyrki HeinoPasi KankaanpääJoacim PäivärinneLassi PaavolainenJonna Nieminensubject
ta113SIMPLE (military communications protocol)Computer sciencebusiness.industryta1182Computational BiologyImage processingCell BiologyBioinformaticsBiochemistryVisualizationHigh-Throughput Screening AssaysUser-Computer InterfaceSoftwareWorkflowImaging Three-DimensionalHuman–computer interactionbusinessCluster analysisMolecular BiologyThroughput (business)AlgorithmsSoftwareBiotechnologyGraphical user interfacedescription
BioImageXD puts open-source computer science tools for three-dimensional visualization and analysis into the hands of all researchers, through a user-friendly graphical interface tuned to the needs of biologists. BioImageXD has no restrictive licenses or undisclosed algorithms and enables publication of precise, reproducible and modifiable workflows. It allows simple construction of processing pipelines and should enable biologists to perform challenging analyses of complex processes. We demonstrate its performance in a study of integrin clustering in response to selected inhibitors.
| year | journal | country | edition | language |
|---|---|---|---|---|
| 2012-01-01 | NATURE METHODS |