6533b820fe1ef96bd12799a6

RESEARCH PRODUCT

Global effects of ade8 deletion on budding yeast metabolism

Karlis SvirkstsJanis LiepinsZane OzolinaKārlis PleikoAgnese KokinaIlze VamzaKristel Tanilas

subject

Purinechemistry.chemical_compoundbiologyChemistryAuxotrophySaccharomyces cerevisiaeAdenylate kinaseRNAbiology.organism_classificationPurine metabolismYeastIntracellularCell biology

description

AbstractPurine auxotrophy is a typical marker for many laboratory yeast strains. Supplementation of additional purine source (like adenine) is necessary to cultivate these strains. If not supplied in adequate amounts, purine starvation sets in. We tested purine starvation effects in budding yeast Saccharomyces cerevisiae ade8 knockout. We explored effects brought by purine starvation in cellular, central carbon metabolism and in the global transcriptome level.We observed that cells cultivated in purine depleted media became significantly more tolerant to severe thermal, oxidative and desiccation stresses when compared to the cells cultivated in media with all necessary supplements. When starved for purine, cells stop their cell cycle in G1 or G0 state; intracellular concentration of ATP, ADP and AMP decreases, but adenylate charge remains stable. Intracellular RNA concentration decreases and massive downregulation of ribosomal RNA occurs.We think that purine auxotrophic starvation in a way mimics “natural” nitrogen or carbon starvations and therefore initiates elements of a transcriptional program typical for stationary phase cells (cell cycle arrest, increased stress resistance). Therefore our results demonstrate that organised metabolic response is initiated not only via “natural starvations”, but also when starving for metabolic intermediates, like purines.

https://doi.org/10.1101/2021.03.15.435510