6533b820fe1ef96bd1279b7c

RESEARCH PRODUCT

Transfection analysis of expression of mRNA isoforms encoding the nuclear autoantigen La/SS-B

Helmut TrösterJulia LaubingerMichael BachmannDaniel GrölzFriederike Wilmer

subject

GuanineTranscription GeneticBiologyTransfectionAutoantigensPolymerase Chain ReactionBiochemistryCell LineCytosineMiceOpen Reading FramesExonExon trappingTranscription (biology)AnimalsHumansRNA MessengerMolecular BiologyGeneDNA PrimersBase CompositionMessenger RNAAlternative splicingExonsCell BiologyTransfectionMolecular biologyAlternative SplicingOpen reading frameRibonucleoproteinsProtein BiosynthesisTranscription Factors

description

Transcription of the gene encoding for the nuclear autoantigen La resulted in La mRNA isoforms. A promoter switching combined with an alternative splicing pathway replaced the exon 1 with the exon 1'. The exon 1' contained GC-rich regions and an oligo(U) tail of 23 uridine residues. Moreover, it encoded for three open reading frames upstream of the La protein reading frame. Despite this unusual structure, when exon 1' La mRNAs were expressed in transfected cells, both exon 1 and 1' La mRNAs were translated to La protein, whereas the upstream open reading frames of the exon 1' were not translated. In addition to full-length exon 1' La mRNAs 5'-shortened exon 1' La mRNAs were detected. The exon 1' 5'-starts varied in dependence on the analyzed tissues. Like the full-length exon 1' La mRNA a 5'-shortened exon 1' construct starting downstream of the oligo(U) tail but upstream of the open reading frames 2 and 3 was also well translated when transfected in mouse cells. Thus all La mRNA forms represent functional La mRNAs.

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