6533b82cfe1ef96bd128fff0

RESEARCH PRODUCT

MOESM3 of Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes

subject

description

Additional file 3. Genome coverage statistics for individual Chinese strains. Sequencing reads derived from the Chinese strains SRA data were mapped to the TPA SS14 and Nichols reference genomes [6]. The number of bases with a coverage depth of 1 or more, number of bases with more than 10× coverage depth and average/median coverage depth are shown. Statistics were calculated from previously post-processed mappings; repetitive and homologous regions and PCR duplicated reads were excluded from statistical analysis.