6533b832fe1ef96bd129ae7c

RESEARCH PRODUCT

Force-clamp spectroscopy of reversible bond breakage.

Andreas JanshoffGregor Diezemann

subject

PhysicsModels MolecularProtein FoldingSpectrum AnalysisFOS: Physical sciencesGeneral Physics and AstronomySecond moment of areaCondensed Matter - Soft Condensed MatterSingle-molecule experimentQuantitative Biology::Subcellular ProcessesFolding (chemistry)Physical PhenomenaKineticsMotionPhoton emissionBreakageModels ChemicalChemical physicsSoft Condensed Matter (cond-mat.soft)ThermodynamicsPoisson DistributionPhysical and Theoretical ChemistryConstant (mathematics)SpectroscopyProtein Binding

description

We consider reversible breaking of adhesion bonds or folding of proteins under the influence of a constant external force. We discuss the stochastic properties of the unbinding/rebinding events and analyze their mean number and their variance in the framework of simple two-state models. In the calculations, we exploit the analogy to single molecule fluorescence and particularly between unbinding/rebinding and photon emission events. Environmental fluctuation models are used to describe deviations from Markovian behavior. The second moment of the event-number distribution is found to be very sensitive to possible exchange processes and can thus be used to identify temporal fluctuations of the transition rates.

10.1063/1.3071199https://pubmed.ncbi.nlm.nih.gov/19191368