Search results for " (OCT)"

showing 10 items of 284 documents

Comparative Study of the Mechanical Unfolding Pathways of α- and β-Peptides

2015

Using molecular simulations, we analyze the unfolding pathways of various peptides. We compare the mechanical unfolding of a β-alanine's octamer (β-HAla8) and an α-alanine's decamer (α-Ala10). Using force-probe molecular-dynamics simulations, to induce unfolding, we show that the 3(14)-helix formed by β-HAla8 is mechanically more stable than the α-helix formed by α-Ala10, although both structures are stabilized by six hydrogen bonds. Additionally, computations of the potential of mean force validate this result and show that also the thermal stability of the 3(14)-helix is higher. It is demonstrated that β-HAla8 unfolds in a two-step fashion with a stable intermediate. This is contrasted wi…

Dynamic strengthHydrogen bondHydrogen BondingMolecular Dynamics SimulationProtein Structure SecondarySurfaces Coatings and Filmschemistry.chemical_compoundCrystallographyMonomerchemistrybeta-AlanineMaterials ChemistryBiophysicsThermal stabilityHistone octamerPhysical and Theoretical ChemistryPotential of mean forcePeptidesThe Journal of Physical Chemistry B
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Application dans le temps de la convention de La Haye du 19 octobre 1996

2014

International audience; Civ. 1re, 20 mars 2013, 2 arrêts, n° 11-24.388 et 11-28.025, D. 2013. 837 ; AJ fam. 2013. 298, obs. A. Boiché

Enfant[SHS.DROIT]Humanities and Social Sciences/Law[SHS.DROIT] Humanities and Social Sciences/LawFAMILLEApplication dans le tempsConvention de La Haye du 19 octobre 1996Protection internationale
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Oxidation of diclofenac in the presence of iron(II) octacarboxyphthalocyanine

2021

Abstract This paper presents the results of the research on the influence of catalytic activity of iron(II) octacarboxyphthalocyanines (FePcOC) on the transformation of diclofenac (DCF) which is the most popular anti-inflammatory analgesic. Diclofenac poses a serious threat to the natural environment. The paper demonstrates that diclofenac, in the presence a monomeric form of iron octacarboxyphthalocyanine and hydroxyl radicals (HO•) (from H2O2), undergoes a transformation into diclofenac-2,5-iminoquinone (DCF-2,5-IQ), causing distinct changes in the UV–Vis absorption spectrum. In the presence of iron octacarboxyphthalocyanine and H2O2, the previously colourless diclofenac solution becomes …

Environmental EngineeringDiclofenacAbsorption spectroscopyIronHealth Toxicology and MutagenesisRadical0208 environmental biotechnology02 engineering and technology010501 environmental sciencesDFT calculations01 natural sciencesHigh-performance liquid chromatographyCatalysischemistry.chemical_compoundDiclofenacmedicineEnvironmental ChemistryFerrous Compounds0105 earth and related environmental sciencesMS analysisHplc analysisChemistryPublic Health Environmental and Occupational HealthMs analysisHydrogen PeroxideGeneral MedicineGeneral ChemistryUV–Vis spectraPollution020801 environmental engineeringTD-DFT spectraMonomerIron octacarboxyphthalocyanineHPLCOxidation-ReductionNuclear chemistrymedicine.drugChemosphere
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Interaction between N-terminal domain of H4 and DNA is regulated by the acetylation degree.

1998

Abstract To study whether the acetylation of one or more of the four acetylatable lysines of histone H4 affects its binding to DNA, we have designed a protection experiment with a model system consisting in phage lambda DNA as substrate, Stu I as restriction endonuclease and histone H4 with different degrees of acetylation as the protective agent. It can be deduced from the experimental data that the protection afforded by the histone is not dependent on the number of positive charges lost by acetylation. Thus, non-acetylated H4 and mono-acetylated H4 cause similar protection, while di-acetylation of the histone seems to be the crucial step in significantly weakening the interaction between…

ErythrocytesBiophysicsAcetylationDNABiologySAP30Chemical FractionationChromatography Ion ExchangeBiochemistryPeptide FragmentsHistone H4HistonesBiochemistryHistone H1Structural BiologyHistone H2AGeneticsHistone codeNucleosomeAnimalsHistone octamerHistone deacetylaseChickens
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Enzymes involved in the dynamic equilibrium of core histone acetylation ofPhysarum polycephalum

1992

DEAE-Scpharose chromatography of extracts from plasmodia of the myxomyccte PI~.~suru~~t ,~/.~crpl~~ho~~ revealed the presence of multiple histone acetyltransferases and histonc deacctylascs. A cyloplasmic histonc acctyltransferase B, specific for histonc H4, and two nuclear acetyltransferases Al and A2 were identilied; Al acetylates all core hislones with a preference for l-13 and H2A. whereas A2 is specific for H3 and also slightly for H2B. Two hislone deacetylases. HDI and HD2, could be discriminated. They differ with respect to subslralc speciliciiy and pH dependence. For the first time the substrate specificity of histonc deacetylascs was determined using HPLC-purilicd individual core h…

ErythrocytesSaccharomyces cerevisiae ProteinsBiophysicsBiochemistryHistone DeacetylasesSubstrate SpecificityHistonesPhysarumHistone H1AcetyltransferasesPhysarum polycephalumStructural BiologyHistone H2AGeneticsAnimalsHistone deacetylaseHistone octamerMolecular BiologyChromatography High Pressure LiquidHistone AcetyltransferasesHistone AcetyltransferasesbiologyHistone deacetylase 2AcetylationButyrateCell BiologyHistone acetyltransferaseMolecular biologyChromatinHistone Deacetylase InhibitorsIsoenzymesButyratesKineticsHistone acetylationBiochemistryHistone methyltransferasebiology.proteinButyric AcidHistone acetyltransferaseHistone deacetylaseChickensProtein Processing Post-TranslationalFEBS Letters
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Gcn5p is involved in the acetylation of histone H3 in nucleosomes.

1997

Abstract Enzymatic extracts from a gcn5 mutant and wild-type strains of Saccharomyces cerevisiae were chromatographically fractionated and the histone acetyltransferase activities compared. When free histones were used as substrate, extracts from wild-type cells showed two peaks of activity on histone H3 but extracts from gcn5 mutant cells showed only one. With nucleosomes as substrate, the histone acetyltransferase activities present in extracts from the gcn5 mutant strain were not able to modify H3 whereas wild-type cell extracts acetylated intensely this histone. The activity that acetylated nucleosome-bound H3 behaved as a 170-kDa complex. We suggest that Gcn5p represents a catalytic su…

ErythrocytesSaccharomyces cerevisiae ProteinsBiophysicsSaccharomyces cerevisiaeBiochemistryFungal ProteinsHistonesHistone H3Histone H1Structural BiologyHistone H2AHistone methylationGeneticsHistone codeAnimalsHistone octamerMolecular BiologyHistone AcetyltransferasesHistone acetyltransferase GCN5biologyAcetylationCell BiologyHistone acetyltransferaseChromatinNucleosomesDNA-Binding ProteinsMolecular WeightBiochemistryNucleosomeHistone methyltransferasebiology.proteinChickensProtein KinasesFEBS letters
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Histone Code and Higher-Order Chromatin Folding: A Hypothesis

2016

AbstractHistone modifications alone or in combination are thought to modulate chromatin structure and function; a concept termed histone code. By combining evidence from several studies, we investigated if the histone code can play a role in higher-order folding of chromatin. Firstly using genomic data, we analyzed associations between histone modifications at the nucleosome level. We could dissect the composition of individual nucleosomes into five predicted clusters of histone modifications. Secondly, by assembling the raw reads of histone modifications at various length scales, we noticed that the histone mark relationships that exist at nucleosome level tend to be maintained at the high…

GenomicsSolenoid (DNA)Computational biologyChromatin remodelingArticleepigenetic regulationchemistry.chemical_compoundHistone H1super-resolution microscopyHistone methylationHistone H2ANucleosomeHistone codemeiosishistone modificationHistone octamerEpigeneticsGeneticsbiologynucleosomeFolding (DSP implementation)ChromatinHistonechemistrychromatin foldinghistone codebiology.proteinDNAchromatin organizationGenomics and computational biology
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OCT e GDx VCC : hardware e software di analisi

2009

Vengono comparati i programmi con le specifiche metodiche di esami dei 2 strumenti per la dia gnosi precoce del glaucoma.

Glaucoma OCT GDx VCCSettore MED/30 - Malattie Apparato Visivo
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Histone H3 Lysine 4 Mono-methylation does not Require Ubiquitination of Histone H2B

2005

The yeast Set1-complex catalyzes histone H3 lysine 4 (H3K4) methylation. Using N-terminal Edman sequencing, we determined that 50% of H3K4 is methylated and consists of roughly equal amounts of mono, di and tri-methylated H3K4. We further show that loss of either Paf1 of the Paf1 elongation complex, or ubiquitination of histone H2B, has only a modest effect on bulk histone mono-methylation at H3K4. Despite the fact that Set1 recruitment decreases in paf1delta cells, loss of Paf1 results in an increase of H3K4 mono-methylation at the 5' coding region of active genes, suggesting a Paf1-independent targeting of Set1. In contrast to Paf1 inactivation, deleting RTF1 affects H3K4 mono-methylation…

Histone H3 Lysine 4UbiquitinLysineSaccharomyces cerevisiaeBiologyMethylationenvironment and public healthMolecular biologyCell biologyHistonesHistone H1Structural BiologyHistone methyltransferaseHistone H2AHistone methylationHistone H2BHistone codeHistone octamerMolecular BiologyJournal of Molecular Biology
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[(1,4,8,11-Tetraazacyclotetradeca-1,4,8,11-tetrayl)tetraacetamide-kappa6N1,N4,N8,N11,O1,O8]copper(II) sulfate 4.5-hydrate.

2002

The crystal structure of the title copper(II) complex, [Cu(C(18)H(36)N(8)O(4))]SO(4).4.5H(2)O, formed with the tetraamide cyclam derivative 2-(4,8,11-triscarbamoylmethyl-1,4,8,11-tetraazacyclotetradec-1-yl)acetamide (TETAM), is described. The macrocycle lies on an inversion centre occupied by the hexacoordinated Cu atom. The four macrocyclic tertiary amines form the equatorial plane of an axially Jahn-Teller elongated octahedron. Two O atoms belonging to two diagonally opposite amide groups occupy the apical positions, giving rise to a trans-III stereochemistry, while both the remaining pendant side arms extend outwards from the macrocyclic cavity and are engaged in hydrogen bonds with sulf…

Hydrogen bondStereochemistrychemistry.chemical_elementGeneral MedicineCrystal structureCopperGeneral Biochemistry Genetics and Molecular BiologyCopper(II) sulfatechemistry.chemical_compoundCrystallographychemistryAmideCyclammedicineElongated octahedronHydratemedicine.drugActa crystallographica. Section C, Crystal structure communications
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