Search results for " Analysis"

showing 10 items of 23639 documents

Mineral phase in shell repair of Manila clam Venerupis philippinarum affected by brown ring disease.

2011

14 pages; International audience; The mineral phase of shell repair in the Manila clam Venerupis philippinarum affected by brown ring disease (BRD) was characterised at various scales and at various stages of shell repair by confocal Raman microspectrometry and scanning electron microscopy. Spherulitic and quadrangular aragonite microstructures associated with polyene pigments were clearly observed. Von Kossa staining showed that at the beginning of shell repair, hemocytes are filled with insoluble calcium carbonate salts in all fluids and then are transported toward the extrapallial fluids and the repair sites. Our analyses suggest that after a Vibrio tapetis attack and BRD deposit some cl…

0106 biological sciencesBiomineralizationHemocytesMineralogyAquatic Scienceengineering.materialSpectrum Analysis Raman010603 evolutionary biology01 natural sciences03 medical and health scienceschemistry.chemical_compoundRaman microspectrometryVenerupis philippinarumAnimalsVon Kossa stain[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolluscaEcology Evolution Behavior and Systematics030304 developmental biologyVibrio0303 health sciencesbiologyAragoniteBivalviabiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsShell microstructureBivalviaCalcium carbonateAragonitechemistry[SDU]Sciences of the Universe [physics]engineeringBiophysicsCarbonateMolluscCalcium carbonateScanning electron microscopyBiomineralizationDiseases of aquatic organisms
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A financial feasibility study of an aquaponic system in a Mediterranean urban context

2019

Abstract Aquaponics is largely recognized as a solution for sustainable food production as it follows a biomimetic natural system and the circular economy principles, allowing large food productivity on nonagricultural land, and at the same time strongly reducing inputs and waste. In this study, we collected technical, economic and production data from a pilot aquaponic plant producing lettuce (Lactuca sativa) and Nile tilapia (Oreochromis niloticus) realized in an urban context in Sicily (Southern Italy), very suitable area for aquaponic production in relation to the Mediterranean climate. Through the determination of Net return and Break Even Point, analysing on one side the items which c…

0106 biological sciencesBreak-even analysiNet returnSoil ScienceContext (language use)Aquaculture010501 environmental sciences010603 evolutionary biology01 natural sciencesAgricultural economicsUrban farmingSettore AGR/01 - Economia Ed Estimo RuraleFinancial analysisRevenueAquaponicsProductivity0105 earth and related environmental sciencesHydroponicEcologybusiness.industryCircular economyForestryLettuceSustainabilityAgricultureEarnings before interest and taxesBusinessTilapia
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Periphyton support for littoral secondary production in a highly humic boreal lake

2016

Steep stratification and poor light penetration in highly humic lakes typically restrict oxygenated littoral areas to narrow lake margins. However, in some instances, surrounding floating vegetation mats can sustain highly productive periphyton and more diverse invertebrate communities than pelagic areas. Little is known about how these littoral food webs function or the extent to which the pelagic and littoral food webs are coupled. We added 15N-labeled ammonium nitrate to the floating moss mat surrounding the littoral zone of Mekkojärvi, a small highly humic and fishless lake in southern Finland. Our goal was to increase the δ15N values of periphyton to investigate the diets of littoral i…

0106 biological sciencesC-13 ADDITIONPOLYHUMIC LAKEAquatic ScienceAQUATIC FOOD WEBSlittoral invertebrates010603 evolutionary biology01 natural sciencesbenthic algaeCARBONMETHANESTABLE-ISOTOPESECOSYSTEMSLittoral zonePeriphytonEcology Evolution Behavior and SystematicsInvertebrateIsotope analysisPerchEcologybiologyEcologystable-isotope analysis010604 marine biology & hydrobiologyPelagic zoneδ15Nisotope additionsbiology.organism_classificationBorealmethane-oxidizing bacteriaCONSUMER PRODUCTIONEnvironmental scienceta1181BENTHIC PATHWAYSTERRESTRIAL ORGANIC-MATTERFreshwater Science
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Comparative analysis of the proximate and elemental composition of the blue crab Callinectes sapidus, the warty crab Eriphia verrucosa, and the edibl…

2016

AbstractThe proximate composition and element contents of claw muscle tissue of Atlantic blue crabs (Callinectes sapidus) were compared with the native warty crab (Eriphia verrucosa) and the commercially edible crab (Cancer pagurus). The scope of the analysis was to profile the chemical characteristics and nutritive value of the three crab species. Elemental fingerprints showed significant inter-specific differences, whereas non-significant variations in the moisture and ash contents were observed. In the blue crab, protein content was significantly lower than in the other two species, while its carbon content resulted lower than that characterizing only the warty crab. Among micro-elements…

0106 biological sciencesCallinectesanimal structureschemistry.chemical_elementZinc010501 environmental sciences01 natural sciencesArticleFood scienceFood science Food chemistry Food constituents Food analysisFood sciencelcsh:Social sciences (General)lcsh:Science (General)Food chemistryEriphia verrucosaShellfish0105 earth and related environmental sciencesfood analysis food chemistry food constituents food scienceCadmiumElemental compositionMultidisciplinarybiologyEcology010604 marine biology & hydrobiologyFood analysisfood and beveragesCancer pagurusProximatebiology.organism_classificationbody regionsFood constituentschemistrylcsh:H1-99lcsh:Q1-390
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No growth stimulation of Canada’s boreal forest under half-century of combined warming and CO 2 fertilization

2016

Considerable evidence exists that current global temperatures are higher than at any time during the past millennium. However, the long-term impacts of rising temperatures and associated shifts in the hydrological cycle on the productivity of ecosystems remain poorly understood for mid to high northern latitudes. Here, we quantify species-specific spatiotemporal variability in terrestrial aboveground biomass stem growth across Canada’s boreal forests from 1950 to the present. We use 873 newly developed tree-ring chronologies from Canada’s National Forest Inventory, representing an unprecedented degree of sampling standardization for a large-scale dendrochronological study. We find significa…

0106 biological sciencesCanadaTime Factors010504 meteorology & atmospheric sciencesClimate ChangeClimate changeForests010603 evolutionary biology01 natural sciencesCarbon CycleTreesCarbon cycleTaigaDendrochronologyEcosystemBiomassWater cycle0105 earth and related environmental sciencesBiomass (ecology)Models StatisticalMultidisciplinaryEcologyGeographyTaigaTemperatureCarbon DioxideGeographyPNAS PlusClimatologySpatial ecologyRegression AnalysisPhysical geographyProceedings of the National Academy of Sciences
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De novo genome assembly of the land snail Candidula unifasciata (Mollusca: Gastropoda)

2021

Abstract Among all molluscs, land snails are a scientifically and economically interesting group comprising edible species, alien species and agricultural pests. Yet, despite their high diversity, the number of genome drafts publicly available is still scarce. Here, we present the draft genome assembly of the land snail Candidula unifasciata, a widely distributed species along central Europe, belonging to the Geomitridae family, a highly diversified taxon in the Western-Palearctic region. We performed whole genome sequencing, assembly and annotation of an adult specimen based on PacBio and Oxford Nanopore long read sequences as well as Illumina data. A genome draft of about 1.29 Gb was gene…

0106 biological sciencesCandidula unifasciataAcademicSubjects/SCI01140AcademicSubjects/SCI00010repeatsPopulationSnailsSequence assemblySnailQH426-470de novo assemblyAcademicSubjects/SCI01180010603 evolutionary biology01 natural sciencesGenome03 medical and health sciencesbiology.animalland snailslong readsGeneticsAnimalseducationMolecular BiologyGeneGenetics (clinical)030304 developmental biologyWhole genome sequencingGeomitridaemolluscs0303 health scienceseducation.field_of_studyGenomebiologyLand snailMolecular Sequence AnnotationGenomicsSequence Analysis DNAbiology.organism_classificationGenome ReportannotationEvolutionary biologyAcademicSubjects/SCI00960G3: Genes|Genomes|Genetics
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Canopy status modulates formation of wood rays in scots pine under hemiboreal conditions

2021

Abstract Non-structural carbohydrates (NSC) reserves are crucial for trees to cope with weather extremes, thus to ensure their survival and ecological plasticity. The NSC reserves can depend on social status, suggesting uneven plasticity of trees at the stand level. In stemwood of Scots pine (Pinus sylvestris L.), which is a widespread and important species, NSC reserves are stored in parenchyma in wood rays (WR). The quantity of WRs is adjusted intra-annually, allowing retrospective analysis of factors affecting their formation. Accordingly, the differences in WR quantity in stemwood of dominant and intermediate (canopy trees with reduced and narrow crowns) maturing Scots pine were assesse…

0106 biological sciencesCanopy010504 meteorology & atmospheric sciencesEcologybiologyHemiborealSpecies distributionScots pineCumulative effectsPlant Sciencebiology.organism_classification01 natural sciencesPinus <genus>AgronomyRetrospective analysis010606 plant biology & botany0105 earth and related environmental sciencesDendrochronologia
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EST based phylogenomics of Syndermata questions monophyly of Eurotatoria

2008

Abstract Background The metazoan taxon Syndermata comprising Rotifera (in the classical sense of Monogononta+Bdelloidea+Seisonidea) and Acanthocephala has raised several hypotheses connected to the phylogeny of these animal groups and the included subtaxa. While the monophyletic origin of Syndermata and Acanthocephala is well established based on morphological and molecular data, the phylogenetic position of Syndermata within Spiralia, the monophyletic origin of Monogononta, Bdelloidea, and Seisonidea and the acanthocephalan sister group are still a matter of debate. The comparison of the alternative hypotheses suggests that testing the phylogenetic validity of Eurotatoria (Monogononta+Bdel…

0106 biological sciencesCharacter evolutionEvolutionRotiferaZoologyBiology010603 evolutionary biology01 natural sciencesAcanthocephalaEvolution Molecular03 medical and health sciencesMonophylyPhylogeneticsHelminthsQH359-425RNA Ribosomal 18SAnimalsBdelloideaPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyExpressed Sequence Tags0303 health sciencesPhylogenetic treeSyndermata; phylogenetic positionGenomicsSequence Analysis DNADNA Helminthbiology.organism_classificationGenetics PopulationSister groupPlatyhelminthsEvolutionary biologyMolecular phylogeneticsAcanthocephalaResearch ArticleBMC Evolutionary Biology
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Chlorophyll fluorescence emission spectrum inside a leaf

2008

International audience; Chlorophyll a fluorescence can be used as an early stress indicator. Fluorescence is also connected to photosynthesis so it can be proposed for global monitoring of vegetation status from a satellite platform. Nevertheless, the correct interpretation of fluorescence requires accurate physical models. The spectral shape of the leaf fluorescence free of any re-absorption effect plays a key role in the models and is difficult to measure. We present a vegetation fluorescence emission spectrum free of re-absorption based on a combination of measurements and modelling. The suggested spectrum takes into account the photosystem I and II spectra and their relative contributio…

0106 biological sciencesChlorophyllChlorophyll aSpectral shape analysisI REACTION CENTERSSPINACH THYLAKOID MEMBRANES[SDU.ASTR.EP]Sciences of the Universe [physics]/Astrophysics [astro-ph]/Earth and Planetary Astrophysics [astro-ph.EP]PHOTOSYNTHETIC MEMBRANEPhotosystem I01 natural sciencesSpectral lineHIGHER-PLANTSPROTEIN COMPLEXES03 medical and health scienceschemistry.chemical_compoundmedicineEmission spectrumPhysical and Theoretical ChemistryChlorophyll fluorescenceLIGHT-HARVESTING COMPLEX030304 developmental biologyRemote sensing0303 health sciencesPhotosystem I Protein Complex[SDU.ASTR]Sciences of the Universe [physics]/Astrophysics [astro-ph]Photosystem II Protein Complexfood and beveragesFluorescencePlant LeavesSpectrometry FluorescenceROOM-TEMPERATUREchemistryPHOTOSYSTEM-I[SDU]Sciences of the Universe [physics]Espectroscòpia de fluorescènciaARABIDOPSIS-THALIANAmedicine.symptomVegetation (pathology)ENERGY-TRANSFER010606 plant biology & botany
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Changes in carbohydrate metabolism in Plasmopara viticola-infected grapevine leaves.

2011

International audience; The oomycete Plasmopara viticola is responsible for downy mildew, a severe grapevine disease. In infected grapevine leaves, we have observed an abnormal starch accumulation at the end of the dark period, suggesting modifications in starch metabolism. Therefore, several complementary approaches, including transcriptomic analyses, measurements of enzyme activities, and sugar quantification, were performed in order to investigate and to understand the effects of P. viticola infection on leaf starch and-to a larger extent-carbohydrate metabolism. Our results indicate that starch accumulation is associated with an increase in ADP-glucose pyrophosphorylase (AGPase) activit…

0106 biological sciencesChlorophyllPhysiologyStarchenzymatic activityhexosesbeta-AmylaseplantGlucose-1-Phosphate Adenylyltransferasetranscriptomic analyse01 natural sciencesinvertasechemistry.chemical_compoundphytopathogenGene Expression Regulation PlantVitisTrehalaseOligonucleotide Array Sequence Analysis0303 health sciencesbiologyfood and beveragesStarchGeneral MedicineEnzymesBiochemistryOomycetesRNA PlantPlasmopara viticolaCarbohydrate metabolism03 medical and health sciencesPlasmopara viticolaADP-glucose pyrophosphorylasePolysaccharidesVignecarbohydrate metabolism[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biology[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular Biologytrehalose030304 developmental biologyPlant Diseasesphotosynthesisbiology.organism_classificationtrehalaseTrehaloseEnzyme assayPlant LeavesInvertasechemistryVitis viniferabiology.proteinDowny mildewfungialpha-AmylasesphysiopathologyAgronomy and Crop Science010606 plant biology & botany
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