Search results for " Complementary"

showing 10 items of 280 documents

Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery

2004

12 páginas, 7 figuras, 1 tabla. Material suplementario en: https://doi.org/10.1016/S0092-8674(03)01025-0. The SUS1 sequences have been deposited in GenBank with the accession number AY278445.

Transcriptional ActivationNucleocytoplasmic Transport ProteinsDNA ComplementarySaccharomyces cerevisiae ProteinsMolecular Sequence DataActive Transport Cell NucleusPorinsRNA polymerase IIBiologyGeneral Biochemistry Genetics and Molecular BiologyFungal ProteinsTranscription (biology)AcetyltransferasesGene Expression Regulation FungalYeastsGene expressionGenes RegulatorTranscriptional regulationAmino Acid SequenceRNA MessengerNuclear proteinPromoter Regions GeneticHistone AcetyltransferasesRegulation of gene expressionCell NucleusBase SequenceBiochemistry Genetics and Molecular Biology(all)Nuclear ProteinsRNA-Binding ProteinsMolecular biologyCell biologySAGA complexRibonucleoproteinsbiology.proteinNuclear PoreGenes LethalChromatin immunoprecipitation
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The modulator is a constitutive enhancer of a developmentally regulated sea urchin histone H2A gene.

2002

Going back to the late 1970s and early 1980s, we trace the Xenopus oocyte microinjection experiments that led to the emergence of the concept of “modulator”. The finding that the modulator could transactivate transcription from far upstream and in either orientation suggested that a new genetic element, different from the classical prokaryotic promoter sequences, had been discovered. This particular enhancer transactivates transcription of the sea urchin early (α) histone H2A gene which is regulated in early sea urchin development. We summarise the data from sea urchin microinjection experiments that confirm and extend the results obtained with Xenopus oocytes. We conclude that the H2A enha…

Transcriptional Activationanimal structuresDNA ComplementaryTranscription GeneticXenopusMolecular Sequence DataXenopusDown-RegulationInsulator (genetics)General Biochemistry Genetics and Molecular BiologyHistonesTranscription (biology)biology.animalHistone H2ANucleosomeAnimalsHumansEnhancerSea urchin3' Untranslated RegionsbiologyBase SequenceModels GeneticGene Expression Regulation Developmentalbiology.organism_classificationMolecular biologyCell biologyChromatinSea Urchinsembryonic structures5' Untranslated RegionsBioEssays : news and reviews in molecular, cellular and developmental biology
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Aberrant splicing of the Drosophila melanogaster phenylalanine hydroxylase pre-mRNA caused by the insertion of a B104/roo transposable element in the…

1999

Abstract We report the insertion of the transposable element B104 in the Phenylalanine hydroxylase gene of the Drosophila mutant Henna-recessive 3 . Its presence alters the Phenylalanine hydroxylase splicing pattern, producing at least two aberrant mRNAs which contain part of the B104 sequence interrupting the coding region. This aberrant splicing is provoked by the use of a cryptic donor site encoded by the B104 3′ long terminal repeat in combination with either the gene intron 3 acceptor site or a novel acceptor site generated by the target duplication caused by transposition. One of them, referred as mRNA type 1, encodes a truncated protein that could be predictably non-functional. In mR…

Transposable elementDNA ComplementaryPhenylalanine hydroxylaseMolecular Sequence DataGenes InsectBiologyBiochemistryRNA PrecursorsAnimalsCoding regionAmino Acid SequenceMolecular BiologyGeneBase SequenceIntronPhenylalanine HydroxylaseExonsTryptophan hydroxylaseMolecular biologyAlternative SplicingMutagenesis InsertionalDrosophila melanogasterInsect ScienceRNA splicingDNA Transposable Elementsbiology.proteinPrecursor mRNAInsect Biochemistry and Molecular Biology
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Construction and expression of a dual vector for chemo-enzymatic synthesis of plant indole alkaloids inEscherichia coli

2010

A dual vector (pQE-70-STR1-SG) containing coding regions of strictosidine synthase (STR1, EC 4.3.3.2) and strictosidine glucosidase (SG, EC 3.2.1.105) from the Indian medicinal plant Rauvolfia serpentina was constructed. Functional expression of the vector in Escherichia coli cells (M15 strain) was proven by isolation of prepurified enzyme extracts, which show both STR1 and SG activities. Incubation of the enzyme in the presence of tryptamine and secologanin delivered the indole alkaloid cathenamine, demonstrating functional co-expression of both STR1- and SG-cDNAs. Cathenamine reduction by sodium borohydride leading to tetrahydroalstonine revealed the chemo-enzymatic indole alkaloid synthe…

TryptamineDNA ComplementaryStrictosidine synthasePlant Sciencemedicine.disease_causeBiochemistryGene Expression Regulation EnzymologicRauwolfiaIndole AlkaloidsAnalytical Chemistrychemistry.chemical_compoundGene Expression Regulation PlantRauvolfia serpentinaCarbon-Nitrogen LyasesEscherichia colimedicineCloning MolecularEscherichia coliPlant ProteinsIndole testchemistry.chemical_classificationMolecular StructurebiologyIndole alkaloidOrganic Chemistrybiology.organism_classificationSecologanin Tryptamine AlkaloidsEnzymechemistryBiochemistrybiology.proteinSecologaninGlucosidasesNatural Product Research
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The Suppressor of fused Gene Encodes a Novel PEST Protein Involved in Drosophila Segment Polarity Establishment

1995

Abstract Suppressor of fused, Su(fu), was identified as a semi-dominant suppressor of the putative serine/threonine kinase encoded by the segment polarity gene fused in Drosophila melanogaster. The amorphic Su(fu) mutation is viable, shows a maternal effect and displays no phenotype by itself. Su(fu) mutations are often found associated to karmoisin (kar) mutations but two complementation groups can be clearly identified. By using a differential hybridization screening method, we have cloned the Su(fu) region and identified chromosomal rearrangements associated with Su(fu) mutations. Two classes of cDNAs with similar developmental patterns, including a maternal contribution, are detectable …

Untranslated regionDNA Complementary[SDV]Life Sciences [q-bio]Recombinant Fusion ProteinsMolecular Sequence DataRestriction MappingInvestigations03 medical and health sciencesPEST sequence0302 clinical medicineTranscription (biology)GeneticsAnimalsDrosophila ProteinsAmino Acid SequenceCloning MolecularGenes SuppressorPeptide sequenceGeneGerm-Line MutationIn Situ Hybridization030304 developmental biologyGenetics0303 health sciencesBase SequencebiologyBlotting Northernbiology.organism_classificationMolecular biology[SDV] Life Sciences [q-bio]Repressor ProteinsComplementationDrosophila melanogasterPhenotypeSegment polarity geneDrosophila melanogaster030217 neurology & neurosurgery
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Cellular UDP-Glucose Deficiency Caused by a Single Point Mutation in the UDP-Glucose Pyrophosphorylase Gene

1997

We previously isolated a mutant cell that is the only mammalian cell reported to have a persistently low level of UDP-glucose. In this work we obtained a spontaneous revertant whose UDP-glucose level lies between those found in the wild type and the mutant cell. The activity of UDP-glucose pyrophosphorylase (UDPG:PP), the enzyme that catalyzes the formation of UDP-glucose, was in the mutant 4% and in the revertant 56% of the activity found in the wild type cell. Sequence analysis of UDPG: PP cDNAs from the mutant cell showed one missense mutation, which changes amino acid residue 115 from glycine to aspartic acid. The substituted glycine is located within the largest stretch of strictly con…

Uridine Diphosphate GlucoseDNA ComplementaryMagnetic Resonance SpectroscopyUTP-Glucose-1-Phosphate UridylyltransferaseMolecular Sequence DataMutantDeoxyglucoseBiologymedicine.disease_causeBiochemistryProtein Structure SecondaryCell LineCricetulusCricetinaeAspartic acidmedicineAnimalsPoint MutationMissense mutationAmino Acid SequenceMolecular Biologychemistry.chemical_classificationMutationSequence Homology Amino AcidPoint mutationWild typeCell BiologyMolecular biologyEnzymeBiochemistrychemistryGlycineJournal of Biological Chemistry
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Expression of the human XPB/ERCC-3 excision repair gene-homolog in the sponge Geodia cydonium after exposure to ultraviolet radiation.

1998

Abstract The marine demosponge Geodia cydonium encodes a gene, termed GCXPB , which displays 62% identity to the human XPB/ERCC-3 gene that specifically corrects the repair defect in xeroderma pigmentosum and in Cockayne's syndrome. The cDNA was isolated and characterized the deduced aa sequence, XPB_GEOCY, with the calculated size of 91,541 Da comprises the characteristic domains found in the related helicases. Phylogenetic tree analysis revealed that the sponge sequence is grouped to the metazoan related XPB/ERCC-3 polypeptides. Northern Blot analyses have been performed with sponge samples collected at different depths, thus exposed to different intensities of UV sunlight in the field. T…

Xeroderma pigmentosumDNA ComplementaryDNA RepairUltraviolet RaysMolecular Sequence DataBiologyToxicologyRadiation ToleranceEvolution MolecularComplementary DNAGene expressionGeneticsmedicineAnimalsNorthern blotAmino Acid SequenceCloning MolecularMolecular BiologyGenePhylogenyGeneticsinduced dna-damage; xeroderma-pigmentosum; cockaynes-syndrome; alignment; biomarker; protein; stressSequence Homology Amino AcidNucleic acid sequenceDNA HelicasesHelicaseSequence Analysis DNAmedicine.diseaseMolecular biologyPoriferaUp-RegulationDNA-Binding Proteinsbiology.proteinNucleotide excision repairDNA DamageMutation research
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Spatially restricted expression of PlOtp, a Paracentrotus lividus Orthopedia-related homeobox gene, is correlated with oral ectodermal patterning and…

1999

ABSTRACT Several homeobox genes are expressed in the sea urchin embryo but their roles in development have yet to be elucidated. Of particular interest are homologues of homeobox genes that in mouse and Drosophila are involved in patterning the developing central nervous system (CNS). Here, we report the cloning of an orthopedia (Otp)-related gene from Paracentrotus lividus, PlOtp. Otp is a single copy zygotic gene that presents a unique and highly restricted expression pattern. Transcripts were first detected at the mid-gastrula stage in two pairs of oral ectoderm cells located in a ventrolateral position, overlying primary mesenchyme cell (PMC) clusters. Increases in both transcript abund…

animal structuresDNA ComplementaryStomodeumBody PatterningPolarity in embryogenesisCell specificationCleavage Stage OvumMolecular Sequence DataGene DosageGene ExpressionSettore BIO/11 - Biologia MolecolareEctodermNerve Tissue ProteinsParacentrotus lividusGene expressionEctodermmedicineAnimalsDrosophila ProteinsAmino Acid SequenceCloning MolecularMolecular BiologyBody PatterningGeneticsHomeodomain ProteinsbiologyBase SequenceGenes HomeoboxOrthopediaSequence Analysis DNAbiology.organism_classificationCell biologymedicine.anatomical_structureEctopic expressionParacentrotus lividusSea UrchinsSpiculogenesisSettore BIO/03 - Botanica Ambientale E Applicataembryonic structuresHomeoboxEctopic expressionDevelopmental Biology
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Bruton tyrosine kinase-like protein, BtkSD, is present in the marine sponge Suberites domuncula.

2003

Sponges, the simplest and most ancient phylum of Metazoa, encode in their genome complex and highly sophisticated proteins that evolved together with multicellularity and are found only in metazoan animals. We report here the finding of a Bruton tyrosine kinase (BTK)-like protein in the marine sponge Suberites domuncula (Demospongiae). The nucleotide sequence of one sponge cDNA predicts a 700-aa-long protein, which contains all of the characteristic domains for the Tec family of protein tyrosine kinases (PTKs). The highest homology (38% identity, 55% overall similarity) was found with human BTK and TEC PTKs. Sponge PTK was therefore named BtkSD. Human BTK is involved in the maturation of B …

animal structuresDNA ComplementaryeducationMolecular Sequence DataHomology (biology)immune system diseaseshemic and lymphatic diseasesComplementary DNAGeneticsAgammaglobulinaemia Tyrosine KinaseBruton's tyrosine kinaseAnimalsHumansAmino Acid SequenceProtein kinase ACaenorhabditis elegansGeneCaenorhabditis elegansGeneticsbiologySequence Homology Amino AcidKinaseProtein-Tyrosine Kinasesbiology.organism_classificationPoriferaSuberites domunculaMutationbiology.proteinGenomics
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A galectin links the aggregation factor to cells in the sponge (Geodia cydonium) system.

1996

The cDNA for the full-length lectin from the marine sponge Geodia cydonium was cloned. Analysis of the deduced aa sequence revealed that this lectin belongs to the group of galectins. The full-length galectin, which was obtained also in a recombinant form, has an M(r) of 20,877; in the processed form it is a 15 kDa polypeptide. The enriched aggregation factor from G.cydonium also was determined to contain, besides minimal amounts of the galectin, a 140 kDa polypeptide which is involved in cell-cell adhesion. Monoclonal antibodies have been raised against this protein; Fab' fragments prepared from them abolished cell-cell reaggregation. Cell reaggregation experiments revealed that the aggreg…

animal structuresDNA Complementarymedicine.drug_classGalectinsCellMolecular Sequence DataMonoclonal antibodyBiochemistrylaw.inventionlawComplementary DNALectinsotorhinolaryngologic diseasesmedicineAnimalsAmino Acid SequenceCloning MolecularCell adhesionGalectinCell AggregationbiologyBase SequenceChemistryLectinAntibodies MonoclonalPoriferastomatognathic diseasesmedicine.anatomical_structureBiochemistrybiology.proteinRecombinant DNAAntibodyCell Adhesion MoleculesProtein BindingGlycobiology
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