Search results for " Compression"

showing 10 items of 400 documents

Large-scale compression of genomic sequence databases with the Burrows-Wheeler transform

2012

Motivation The Burrows-Wheeler transform (BWT) is the foundation of many algorithms for compression and indexing of text data, but the cost of computing the BWT of very large string collections has prevented these techniques from being widely applied to the large sets of sequences often encountered as the outcome of DNA sequencing experiments. In previous work, we presented a novel algorithm that allows the BWT of human genome scale data to be computed on very moderate hardware, thus enabling us to investigate the BWT as a tool for the compression of such datasets. Results We first used simulated reads to explore the relationship between the level of compression and the error rate, the leng…

FOS: Computer and information sciencesStatistics and ProbabilityBurrows–Wheeler transformComputer scienceData_CODINGANDINFORMATIONTHEORYBurrows-Wheeler transformcomputer.software_genreBiochemistryBurrows-Wheeler transform; Data Compression; Next-generation sequencingComputer Science - Data Structures and AlgorithmsEscherichia coliCode (cryptography)HumansOverhead (computing)Data Structures and Algorithms (cs.DS)Computer SimulationQuantitative Biology - GenomicsMolecular BiologyGenomics (q-bio.GN)Genome HumanString (computer science)Search engine indexingSortingGenomicsSequence Analysis DNAConstruct (python library)Data CompressionComputer Science ApplicationsComputational MathematicsComputational Theory and MathematicsFOS: Biological sciencesNext-generation sequencingData miningDatabases Nucleic AcidcomputerAlgorithmsData compression
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Concrete columns confined with fibre reinforced cementitious mortars: Experimentation and modelling

2014

Abstract The structural behaviour of concrete columns strengthened with a system made up of fibre nets embedded in an inorganic stabilized cementitious matrix under an uniaxial load was investigated. Medium size specimens with circular and square cross-section were cast and subjected to monotonic uniaxial compression, to investigate the efficiency of a p-Phenylene BenzobisOxazole (PBO) Fibre Reinforced Cementitious Mortar (FRCM) system in increasing both strength and ductility. The experimental results show that the confinement system adopted produced a noticeable increment in strength and ductility, though the low mechanical ratios of fibre considered were not always able to ensure hardeni…

FRCM Confinement Fibres Laminates Strength Mechanical testing Analytical modelling Reinforced concreteMaterials sciencebusiness.industryUniaxial compressionBuilding and ConstructionStructural engineeringReinforced concreteSettore ICAR/09 - Tecnica Delle CostruzioniAnalytical modelling; Confinement; PBO fibres; fiber reinforced cementitiuos matrix (FRCM); Laminates; Mechanical testing; Reinforced concrete; StrengthHardening (metallurgy)General Materials ScienceCementitiousMortarComposite materialUniaxial loadbusinessCementitious matrixCivil and Structural Engineering
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Influenza del confinamento del calcestruzzo con FRP sulla stabilità delle barre compresse

2009

FRP instabilità confinamento compressioneSettore ICAR/08 - Scienza Delle Costruzioni
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Femtosecond pulse compression in a hollow-core photonic bandgap fiber by tuning its cross section

2012

Abstract We present a numerical study of soliton pulse compression in a seven-cell hollow-core photonic bandgap fiber. We analyze the enhancement of both the compression factor and the pulse shape quality of 360 nJ femtosecond pulses at the wavelength of 800 nm by tuning the cross section size of the fiber. We use the generalized non-linear Schrodinger equation in order to modeled the propagation of light pulses along the fiber. Our numerical results show that output compressed pulses can be obtained, in a propagation length of 31 cm, with a compression factor of 5.7 and pulse shape quality of 77% for a reduction of 4.5% of the cross section size of the fiber. The predicted compression fact…

Femtosecond pulse shapingMaterials scienceFilling factorbusiness.industryPhysics::OpticsPolarization-maintaining optical fiberMicrostructured optical fiberCondensed Matter PhysicsGraded-index fiberAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsOpticsHardware and ArchitecturePulse compressionDispersion-shifted fiberElectrical and Electronic EngineeringPlastic optical fiberbusinessPhotonics and Nanostructures - Fundamentals and Applications
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Towards CEP stable, single-cycle pulse compression with bulk material

2010

We demonstrate both experimentally and numerically that self-steepening during propagation in a hollow-fiber followed by linear propagation through glass in the anomalous dispersion enables pulse compression down to 1.6 cycles at 1.8 µm wavelength.

Femtosecond pulse shapingMaterials sciencebusiness.industryPhysics::OpticsNonlinear opticsSecond-harmonic generationWavelengthOpticsPulse compressionHigh harmonic generationHigh Energy Physics::ExperimentbusinessSelf-phase modulationUltrashort pulseInternational Conference on Ultrafast Phenomena
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All-fibered high-quality low duty-cycle 20-GHz and 40-GHz picosecond pulse sources

2007

International audience; In this work, we demonstrate all-fibered 20-GHz and 40-GHz picosecond pulse sources with duty cycles as low as 1/14. The pulse train is achieved via the high-quality compression of an initial sinusoidal beating through four segments of optical fibers. General design rules are proposed and experimental results are in agreement with numerical predictions.

Femtosecond pulse shapingOptical fiberMaterials science02 engineering and technology01 natural scienceslaw.invention010309 optics020210 optoelectronics & photonicsQuality (physics)OpticsFiber Bragg gratinglaw0103 physical sciences0202 electrical engineering electronic engineering information engineeringPulse waveElectrical and Electronic EngineeringOptical amplifier[PHYS.PHYS.PHYS-OPTICS]Physics [physics]/Physics [physics]/Optics [physics.optics][ PHYS.PHYS.PHYS-OPTICS ] Physics [physics]/Physics [physics]/Optics [physics.optics]business.industryNonlinear opticsAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsPicosecond pulsePulse compressionDuty cycleOptoelectronicsbusinessUltrashort pulsePhase modulation
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320GHz, 640GHz and 1THz femtosecond pulse sources based on multiple four wave mixing in highly non linear optical fibers

2006

Ultra-high repetition rate, transform-limited femtosecond pulse trains have been generated around 1555 nm at 320 GHz, 640 GHz and 1 THz through the compression of a dual frequency beat-signal in a highly nonlinear optical fiber.

Femtosecond pulse shapingOptical fiberMaterials scienceFemtosecond pulsebusiness.industryTerahertz radiationPhysics::OpticsNonlinear optics02 engineering and technology021001 nanoscience & nanotechnology01 natural scienceslaw.invention010309 opticsNonlinear systemFour-wave mixingOpticslawPulse compression0103 physical sciencesOptoelectronics0210 nano-technologybusinessComputingMilieux_MISCELLANEOUS
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Impact of initial pulse shape on the nonlinear spectral compression in optical fibre

2018

International audience; We theoretically study the effects of the temporal intensity profile of the initial pulse on the nonlinear spectral compression process arising from nonlinear propagation in an optical fibre. Various linearly chirped input pulse profiles are considered, and their dynamics is explained with the aid of time-frequency representations. While initially parabolic-shaped pulses show enhanced spectral compression compared to Gaussian pulses, no significant spectral narrowing occurs when initially super-Gaussian pulses are used. Triangular pulses lead to a spectral interference phenomenon similar to the Fresnel bi-prism experiment.

Femtosecond pulse shapingOptical fiberMaterials scienceGaussianNonlinear spectral compression02 engineering and technologynonlinear fiber optics01 natural scienceslaw.invention010309 opticssymbols.namesake020210 optoelectronics & photonicsOpticslaw0103 physical sciences0202 electrical engineering electronic engineering information engineeringElectrical and Electronic Engineering[PHYS.PHYS.PHYS-OPTICS]Physics [physics]/Physics [physics]/Optics [physics.optics][ PHYS.PHYS.PHYS-OPTICS ] Physics [physics]/Physics [physics]/Optics [physics.optics]business.industryPulse shapingAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsPulse (physics)Nonlinear systemsymbolsbusinessUltrashort pulseBandwidth-limited pulsepulse shaping
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All-fiber spectral compression of picosecond pulses at telecommunication wavelength enhanced by amplitude shaping

2012

International audience; We demonstrate efficient spectral compression of picosecond pulses in an all-fiber configuration at telecommunication wavelengths. A spectral compression by a factor 12 is achieved. Performing temporal shaping with a parabolic pulse significantly improves the spectral compression with much lower substructures and an enhanced Strehl ratio.

Femtosecond pulse shapingOptical fiberMaterials sciencePhysics::Optics02 engineering and technology01 natural scienceslaw.invention010309 optics020210 optoelectronics & photonicsOpticslaw0103 physical sciences0202 electrical engineering electronic engineering information engineeringElectrical and Electronic EngineeringEngineering (miscellaneous)[PHYS.PHYS.PHYS-OPTICS]Physics [physics]/Physics [physics]/Optics [physics.optics][ PHYS.PHYS.PHYS-OPTICS ] Physics [physics]/Physics [physics]/Optics [physics.optics]business.industryStrehl ratioPulse shapingAtomic and Molecular Physics and OpticsPulse compressionPicosecondOptoelectronicsTelecommunicationsbusinessPhase modulationPhotonic-crystal fiber
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Supercontinuum generation at 800 nm in all-normal dispersion photonic crystal fiber

2014

We have numerically investigated the supercontinuum generation and pulse compression in a specially designed all-normal dispersion photonic crystal fiber with a flat-top dispersion curve, pumped by typical pulses from state of the art Ti:Sapphire lasers at 800 nm. The optimal combination of pump pulse parameters for a given fiber was found, which provides a wide octave-spanning spectrum with superb spectral flatness (a drop in spectral intensity of ~1.7 dB). With regard to the pulse compression for these spectra, multiple-cycle pulses (~8 fs) can be obtained with the use of a simple quadratic compressor and nearly single-cycle pulses (3.3 fs) can be obtained with the application of full pha…

Femtosecond pulse shapingPhotonsMaterials sciencebusiness.industrySpectrum AnalysisPhysics::OpticsÒpticaAtomic and Molecular Physics and OpticsSupercontinuumOpticsPulse compressionDispersion (optics)OptoelectronicsbusinessSelf-phase modulationCrystallizationUltrashort pulseBandwidth-limited pulseOptical FibersPhotonic-crystal fiber
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