Search results for " Development"

showing 10 items of 21333 documents

Essential Oil Yield, Chemical Composition, and Total Citral Content of Nine Cultivars of Cymbopogon Species from Western India

2016

ABSTRACTThe essential oil composition of five elite Cymbopogon varieties (OD-19, Pragati, RRL-16, NLG-84) and a hybrid (CPK-25) and four new selections (LS-1 to LS-4) were determined by gas chromatography (GC) and gas chromatography-mass spectrometry (GC-MS). The oil yield ranged from 0.31% to 1.0% with CPK-25 (1.0%) and LS-2 (0.95%) containing the highest. A total of 66 compounds, constituting 84.6–94.3% of the oils, were identified. The main compounds were geranial (29.9–41.6%), neral (25.8–32.5%), citronellol (0.3–12.8%), geranyl acetate (1.2–8.4%), and geraniol (1.8–8.2%). Of the cultivars, OD-19 (74.1%) had the highest and LS-3 (55.7%) contained the lowest amount of total citral. CKP-2…

0106 biological sciences0301 basic medicinePharmacologyCitronellolGeranyl acetateCitral01 natural scienceslaw.invention03 medical and health scienceschemistry.chemical_compoundHorticulture030104 developmental biologyComplementary and alternative medicinechemistrylawBotanyComposition (visual arts)CultivarGas chromatographyEssential oilGeraniol010606 plant biology & botanyJournal of Herbs, Spices & Medicinal Plants
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2021

Predator-induced plasticity in life-history and antipredator traits during the larval period has been extensively studied in organisms with complex life-histories. However, it is unclear whether different levels of predation could induce warning signals in aposematic organisms. Here, we investigated whether predator-simulated handling affects warning coloration and life-history traits in the aposematic wood tiger moth larva, Arctia plantaginis. As juveniles, a larger orange patch on an otherwise black body signifies a more efficient warning signal against predators but this comes at the costs of conspicuousness and thermoregulation. Given this, one would expect that an increase in predation…

0106 biological sciences0301 basic medicinePhenotypic plasticityLarvaEcologyForagingZoologyAposematismBiologyTrade-off010603 evolutionary biology01 natural sciencesLife history theoryPredation03 medical and health sciences030104 developmental biologyPredatorEcology Evolution Behavior and SystematicsFrontiers in Ecology and Evolution
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How ants acclimate: Impact of climatic conditions on the cuticular hydrocarbon profile

2017

1.Organisms from temperate zones are exposed to seasonal changes and must be able to cope with a wide range of climatic conditions. Especially ectotherms, including insects, are at risk to desiccate under dry and warm conditions, the more so given the changing climate. 2.To adjust to current conditions, organisms acclimate through changes in physiology, morphology and/or behaviour. Insects protect themselves against desiccation through a layer of cuticular hydrocarbons (CHC) on their body surface. Hence, acclimation may also affect the CHC profile, changing their waterproofing capacity under different climatic conditions. 3.Here, we investigated the acclimation response of two Temnothorax a…

0106 biological sciences0301 basic medicinePhenotypic plasticityTemnothoraxbiologyEcologyRange (biology)biology.organism_classification010603 evolutionary biology01 natural sciencesAcclimatizationBeneficial acclimation hypothesis03 medical and health sciences030104 developmental biologyEctothermTemperate climateDesiccationEcology Evolution Behavior and SystematicsFunctional Ecology
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Rhynchophorus ferrugineus attack affects a group of compounds rather than rearranging Phoenix canariensis metabolic pathways

2015

The red palm weevil (RPW; Rhynchophorus ferrugineus) is spreading worldwide and severely harming many palm species. However, most studies on RPW focused on insect biology, and little information is available about the plant response to the attack. In the present experiment, we used metabolomics to study the alteration of the leaf metabolome of Phoenix canariensis at initial (1st stage) or advanced (2nd stage) attack by RPW compared with healthy (unattacked) plants. The leaf metabolome significantly varied among treatments. At the 1st stage of attack, plants showed a reprogramming of carbohydrate and organic acid metabolism; in contrast, peptides and lipid metabolic pathways underwent more c…

0106 biological sciences0301 basic medicinePhenylpropanoidWeevilfood and beveragesPlant ScienceBiologybiology.organism_classification01 natural sciencesBiochemistryGeneral Biochemistry Genetics and Molecular BiologyTerpenoid03 medical and health sciencesMetabolic pathwayRhynchophorus030104 developmental biologyMetabolomicsBiochemistryPhoenix canariensisBotanyMetabolome010606 plant biology & botanyJournal of Integrative Plant Biology
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X!TandemPipeline: a tool to manage sequence redundancy for protein inference and phosphosite identification

2017

X!TandemPipeline is a software designed to perform protein inference and to manage redundancy in the results of phosphosite identification by database search. It provides the minimal list of proteins or phosphosites that are present in a set of samples using grouping algorithms based on the principle of parsimony. Regarding proteins, a two-level classification is performed, where groups gather proteins sharing at least one peptide and subgroups gather proteins that are not distinguishable according to the identified peptides. Regarding phosphosites, an innovative approach based on the concept of phosphoisland is used to gather overlapping phosphopeptides. The graphical interface of X!Tandem…

0106 biological sciences0301 basic medicinePhosphopeptidesProteomicsphosphopeptideComputer sciencecomputer.internet_protocolcomputer.software_genre01 natural sciencesBiochemistrydatabase search03 medical and health sciencesSearch engineUser-Computer InterfaceRedundancy (information theory)SoftwareTandem Mass Spectrometry[ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM]HumansDatabase search engineAmino Acid SequenceDatabases ProteinGraphical user interfacemass spectrometrybusiness.industrysoftwareprotein inferenceProteinsGeneral ChemistrybioinformaticsSearch EngineBenchmarking030104 developmental biologyComputingMethodologies_PATTERNRECOGNITIONProtein inferenceData mining[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]businesscomputerXMLAlgorithms010606 plant biology & botany
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Propagule pressure increase and phylogenetic diversity decrease community’s susceptibility to invasion

2017

Background Invasions pose a large threat to native species, but the question of why some species are more invasive, and some communities more prone to invasions than others, is far from solved. Using 10 different three-species bacterial communities, we tested experimentally if the phylogenetic relationships between an invader and a resident community and the propagule pressure affect invasion probability. Results We found that greater diversity in phylogenetic distances between the members of resident community and the invader lowered invasion success, and higher propagule pressure increased invasion success whereas phylogenetic distance had no clear effect. In the later stages of invasion,…

0106 biological sciences0301 basic medicinePhylogenetic similarity and propagule pressuremedia_common.quotation_subjectPhylogenetic distanceIntroduced speciesphylogenetic distanceBiologyBacterial Physiological Phenomena010603 evolutionary biology01 natural sciencesCompetition (biology)bakteerit03 medical and health sciencesInvasionphylogenetic similarity and propagule pressureAnimalsPhylogenySerratia marcescensQH540-549.5Ecology Evolution Behavior and SystematicsGeneral Environmental Sciencemedia_commonBacteriaCompetitionEcologyPhylogenetic treeEcologyCommunity identityPropagule pressureGenetic Variation15. Life on landinvasionPhylogenetic diversity030104 developmental biologyPhylogenetic distancecompetitionResearch ArticleBMC Ecology
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paco: implementing Procrustean Approach to Cophylogeny in R

2017

Summary The concordance of evolutionary histories and extant species interactions provides a useful metric for addressing questions of how the structure of ecological communities is influenced by macro-evolutionary processes. We introduce paco (v0.3.1), an R package to perform Procrustean Approach to Cophylogeny. This method assesses the phylogenetic congruence, or evolutionary dependence, of two groups of interacting species using both ecological interaction networks and their phylogenetic history. We demonstrate the functionality of paco through its application to empirical host-parasite and plant-pollinator communities. Although the package is intended to assess the phylogenetic congruen…

0106 biological sciences0301 basic medicinePhylogenetic treeEcological ModelingBiogeographyBioinformatics010603 evolutionary biology01 natural sciences03 medical and health sciencesR package030104 developmental biologyCongruence (geometry)Evolutionary biologyMetric (mathematics)Molecular phylogeneticsEvolutionary ecologySociocultural evolutionEcology Evolution Behavior and SystematicsMethods in Ecology and Evolution
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Underestimated regional species diversity in the Cape Floristic Region revealed by phylogenetic analysis of the Erica abietina/E. viscaria clade (Eri…

2017

0106 biological sciences0301 basic medicinePhylogenetic treeEcologySpecies diversityPlant ScienceBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesFloristics03 medical and health sciences030104 developmental biologyEricaceaeCapeBotanyTaxonomy (biology)CladeEndemismEcology Evolution Behavior and SystematicsBotanical Journal of the Linnean Society
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Synthesis of Isomaltooligosaccharides by Saccharomyces cerevisiae Cells Expressing Aspergillus niger α‑Glucosidase

2017

The α-glucosidase encoded by the aglA gene of Aspergillus niger is a secreted enzyme belonging to family 31 of glycoside hydrolases. This enzyme has a retaining mechanism of action and displays transglycosylating activity that makes it amenable to be used for the synthesis of isomaltooligosaccharides (IMOs). We have expressed the aglA gene in Saccharomyces cerevisiae under control of a galactose-inducible promoter. Recombinant yeast cells expressing the aglA gene produced extracellular α-glucosidase activity about half of which appeared cell bound whereas the other half was released into the culture medium. With maltose as the substrate, panose is the main transglycosylation product after 8…

0106 biological sciences0301 basic medicinePhysical and chemical processesGeneral Chemical EngineeringSaccharomyces cerevisiaeCarbohydrates01 natural sciencesArticlelcsh:Chemistry03 medical and health scienceschemistry.chemical_compound010608 biotechnologyGeneticsGlycoside hydrolasechemistry.chemical_classificationbiologyAspergillus nigerProteinsGeneral ChemistryMaltoseIsomaltosebiology.organism_classificationYeastPANOSE030104 developmental biologyEnzymeBiochemistrychemistrylcsh:QD1-999ACS Omega
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Evidence for Succession and Putative Metabolic Roles of Fungi and Bacteria in the Farming Mutualism of the Ambrosia Beetle Xyleborus affinis.

2020

The bacterial and fungal community involved in ambrosia beetle fungiculture remains poorly studied compared to the famous fungus-farming ants and termites. Here we studied microbial community dynamics of laboratory nests, adults, and brood during the life cycle of the sugarcane shot hole borer, Xyleborus affinis. We identified a total of 40 fungal and 428 bacterial operational taxonomic units (OTUs), from which only five fungi (a Raffaelea fungus and four ascomycete yeasts) and four bacterial genera (Stenotrophomonas, Enterobacter, Burkholderia, and Ochrobactrum) can be considered the core community playing the most relevant symbiotic role. Both the fungal and bacterial populations varied s…

0106 biological sciences0301 basic medicinePhysiologyAmbrosia fungimicrobiomeFungicultureFungusBiologyAmbrosia beetle010603 evolutionary biology01 natural sciencesBiochemistryMicrobiologyHost-Microbe Biology03 medical and health sciencesmycobiomeSymbiosisBotanyGeneticsAmbrosiaInternal transcribed spacerXyleborus affinisMolecular BiologyEcology Evolution Behavior and SystematicsMutualism (biology)fungibiology.organism_classificationQR1-502Computer Science Applications030104 developmental biologyModeling and SimulationResearch Article
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