Search results for " FIX"

showing 10 items of 575 documents

Agro-ecological benefits of faba bean for rainfed Mediterranean cropping systems

2017

This paper reviews the main results from a set of experiments carried out in a semiarid Mediterranean environment during the past 25 years on faba bean (<em>Vicia faba</em> L.), a crop traditionally grown in southern Italy and Sicily under rainfed conditions. These experiments focused on the residual effects of faba bean on subsequent crop(s) and assessment of the nitrogen (N) balance during the crop cycle, paying attention to both the environmental release of N (losses via volatilisation and denitrification) and estimates of N2 fixation as influenced by tillage system, intercropping, and presence/absence of mycorrhizal inoculum. Faba bean relied on N2 fixation more than other g…

0106 biological sciencesMediterranean climateDenitrificationGrain legumeCrop rotation; Grain legume; N sparing; N2 fixation; Vicia faba L; Agricultural and Biological Sciences (all)Biologylcsh:Plant culture01 natural sciencesVicia faba L.lcsh:AgricultureN2 fixationCrop rotationN sparingMineral particleslcsh:SB1-1110Leaching (agriculture)lcsh:SIntercropping04 agricultural and veterinary sciencesbiology.organism_classificationVicia fabaSettore AGR/02 - Agronomia E Coltivazioni ErbaceeTillageAgronomyAgricultural and Biological Sciences (all)Vicia faba L040103 agronomy & agriculture0401 agriculture forestry and fisheriesAgronomy and Crop ScienceCropping010606 plant biology & botany
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Impacts of arbuscular mycorrhizal fungi on nutrient uptake, N2 fixation, N transfer, and growth in a wheat/faba bean intercropping system

2019

Arbuscular mycorrhizal fungi (AMF) can play a key role in natural and agricultural ecosystems affecting plant nutrition, soil biological activity and modifying the availability of nutrients by plants. This research aimed at expanding the knowledge of the role played by AMF in the uptake of macro- and micronutrients and N transfer (using a 15 N stem-labelling method) in a faba bean/wheat intercropping system. It also investigates the role of AMF in biological N fixation (using the natural isotopic abundance method) in faba bean grown in pure stand and in mixture. Finally, it examines the role of AMF in driving competition and facilitation between faba bean and wheat. Durum wheat and faba bea…

0106 biological sciencesPlant Roots01 natural sciencesSoilNutrientMycorrhizaeVegetablesBiomassTriticummedia_commonMultidisciplinaryN2 biological fixationQREukaryotafood and beveragesAgriculturePhosphorusIntercropping04 agricultural and veterinary sciencesPlantsAgricultural MethodsLegumesVicia fabaAMF symbiosiSettore AGR/02 - Agronomia E Coltivazioni ErbaceeWheatNitrogen fixationMedicineResearch ArticleCrops AgriculturalNitrogenBeansSoil biologymedia_common.quotation_subjectScienceCropsBiologyCompetition (biology)SymbiosisNitrogen FixationGrassesSymbiosisEcosystemInoculationfungiOrganismsFungiBiology and Life SciencesNutrientsbiology.organism_classificationCereal-legume intercroppingSpecies InteractionsIntercroppingAgronomy040103 agronomy & agriculture0401 agriculture forestry and fisheriesPlant nutritionCrop ScienceCereal Crops010606 plant biology & botany
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Can sucrose content in the phloem sap reaching field pea seeds (Pisum sativum L.) be an accurate indicator of seed growth potential ?

2003

The composition of the translocates reaching the seeds of pea plants having various nitrogen (N) nutrition regimes was investigated under field situations. Sucrose flow in the phloem sap increased with the node number, but was not significantly different between N nutrition levels. Because N deficiency reduced the number of flowering nodes and the number of seeds per pod, the sucrose flow bleeding from cut peduncles was divided by the number of seeds to give the amount of assimilates available per seed. The sucrose concentration in phloem sap supplied to seeds at the upper nodes was higher than that at the lower nodes. The flow of sucrose delivered to the seeds during the cell division peri…

0106 biological sciencesSucroseTime FactorsSucrosePhysiologyPlant ScienceBiology01 natural sciencesPisum[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics03 medical and health scienceschemistry.chemical_compoundField peaSativumNitrogen FixationBotanySaviaSymbiosisComputingMilieux_MISCELLANEOUSPlant Proteins030304 developmental biology2. Zero hunger0303 health sciencesPeasTemperatureMembrane Transport Proteinsfood and beveragesFabaceaeFabaceae[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsbiology.organism_classificationHorticulturePoint of deliverychemistrySeedsPhloemBiomarkers010606 plant biology & botany
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Growth and activities of enzymes of primary metabolism in batch cultures of Catharanthus roseus cell suspension under different pCO2 conditions

1988

In vitro enzyme activities of glycolysis, pentose-phosphate pathway and dark CO2 fixation were assayed in batch cultures of heterotrophic Catharanthus roseus cells under various gassing rates and partial pressures of carbon dioxide. Detrimental effects of low pCO2 culture conditions on the growth characteristics could be linked to marked changes in levels of enzymes of primary metabolism during growth. The enzyme levels observed during the early stages of growth were found to be more stable when a constant pCO2 (20 mbar) was maintained and enabled exponential growth to be reached more rapidly. The importance of carbon dioxide as a “conditioning factor” of the culture medium is discussed.

0106 biological sciences[SDV]Life Sciences [q-bio]HeterotrophHorticulture01 natural sciences03 medical and health scienceschemistry.chemical_compoundComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyCarbon fixationPlant physiologyMetabolismCatharanthus roseusbiology.organism_classification[SDV] Life Sciences [q-bio]EnzymeBiochemistrychemistryCell cultureCULTURE DE CELLULECarbon dioxideGAZ CARBONIQUE010606 plant biology & botany
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Pea Efficiency of Post-drought Recovery Relies on the Strategy to Fine-Tune Nitrogen Nutrition

2020

International audience; As drought is increasingly frequent in the context of climate change it is a major constraint for crop growth and yield. The ability of plants to maintain their yield in response to drought depends not only on their ability to tolerate drought, but also on their capacity to subsequently recover. Post-stress recovery can indeed be decisive for drought resilience and yield stability. Pea (Pisum sativum), as a legume, has the capacity to fix atmospheric nitrogen through its symbiotic interaction with soil bacteria within root nodules. Biological nitrogen fixation is highly sensitive to drought which can impact plant nitrogen nutrition and growth. Our study aimed at dyna…

0106 biological sciencesagroecologyrootssymbiotic nitrogen fixationRoot nodulegrain legumes[SDV]Life Sciences [q-bio]chemistry.chemical_elementContext (language use)Plant ScienceBiologylcsh:Plant culture01 natural sciencesPisumyield stability03 medical and health sciencesSativumDrought recoverylcsh:SB1-1110resilienceLegumePisum sativumOriginal Research030304 developmental biologywater deficit2. Zero hunger0303 health sciencesfungifood and beverages15. Life on landbiology.organism_classificationNitrogenchemistryAgronomy13. Climate actionNitrogen fixation010606 plant biology & botanyFrontiers in Plant Science
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Novel Autotrophic Organisms Contribute Significantly to the Internal Carbon Cycling Potential of a Boreal Lake

2018

ABSTRACT Oxygen-stratified lakes are typical for the boreal zone and also a major source of greenhouse gas emissions in the region. Due to shallow light penetration, restricting the growth of phototrophic organisms, and large allochthonous organic carbon inputs from the catchment area, the lake metabolism is expected to be dominated by heterotrophic organisms. In this study, we test this assumption and show that the potential for autotrophic carbon fixation and internal carbon cycling is high throughout the water column. Further, we show that during the summer stratification carbon fixation can exceed respiration in a boreal lake even below the euphotic zone. Metagenome-assembled genomes an…

0301 basic medicine030106 microbiologyHeterotrophDNA RibosomaljärvetMicrobiologyCarbon cycle03 medical and health sciencesWater columnTotal inorganic carbonRNA Ribosomal 16SVirologyCluster AnalysisPhotic zoneAnaerobiosis14. Life underwaterAutotrophFinlandPhylogeny030304 developmental biologyTotal organic carbon0303 health sciencesAutotrophic ProcessesmetagenomicsPhototroph030306 microbiologygreenhouse gas emissionsEcologyhiilen kiertoCarbon fixationSequence Analysis DNAiron oxidizers15. Life on landBiotaCarbonQR1-502Food webLakesMikrobiologi13. Climate actionmikro-organismitredox gradientEnvironmental sciencechemoautotrophyResearch ArticlemBio
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Infrared microspectroscopic determination of collagen cross-links in articular cartilage

2017

Collagen forms an organized network in articular cartilage to give tensile stiffness to the tissue. Due to its long half-life, collagen is susceptible to cross-links caused by advanced glycation end-products. The current standard method for determination of cross-link concentrations in tissues is the destructive high-performance liquid chromatography (HPLC). The aim of this study was to analyze the cross-link concentrations nondestructively from standard unstained histological articular cartilage sections by using Fourier transform infrared (FTIR) microspectroscopy. Half of the bovine articular cartilage samples ( n = 27 ) were treated with threose to increase the collagen cross-linking whi…

0301 basic medicineCartilage ArticularGlycation End Products AdvancedcollagenSpectrophotometry InfraredPROTEOGLYCAN01 natural sciencesHigh-performance liquid chromatographychemistry.chemical_compoundBiomedicinsk laboratorievetenskap/teknologiPartial least squares regressionBiomedical Laboratory Science/Technologyinfrared spectroscopyPyridinolineThreoseChemistryMedicinsk bildbehandlingSTIFFNESSinfrapunaspektroskopiata3141AnatomyAtomic and Molecular Physics and OpticsDIFFUSIONElectronic Optical and Magnetic Materialsmedicine.anatomical_structuremultivariate analysisGLYCATION END-PRODUCTSNONENZYMATIC GLYCATIONBiomedical EngineeringInfrared spectroscopyI COLLAGENFORMALIN FIXATIONcross-linksOrthopaedicsBiomaterials03 medical and health sciencesmedicineAnimalsarticular cartilageFourier transform infrared spectroscopyPentosidineLeast-Squares Analysista217ChromatographyCartilage010401 analytical chemistry3126 Surgery anesthesiology intensive care radiology0104 chemical sciencesMedical Image Processing030104 developmental biologyOrtopedi1182 Biochemistry cell and molecular biologyCattleJournal of Biomedical Optics
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Reconstruction of Diverse Verrucomicrobial Genomes from Metagenome Datasets of Freshwater Reservoirs

2017

The phylum Verrucomicrobia contains freshwater representatives which remain poorly studied at the genomic, taxonomic, and ecological levels. In this work we present eighteen new reconstructed verrucomicrobial genomes from two freshwater reservoirs located close to each other (Tous and Amadorio, Spain). These metagenomeassembled genomes (MAGs) display a remarkable taxonomic diversity inside the phylum and comprise wide ranges of estimated genome sizes (from 1.8 to 6 Mb). Among all Verrucomicrobia studied we found some of the smallest genomes of the Spartobacteria and Opitutae classes described so far. Some of the Opitutae family MAGs were small, cosmopolitan, with a general heterotrophic met…

0301 basic medicineMicrobiology (medical)Range (biology)030106 microbiologylcsh:QR1-502BiologyMicrobiologyGenomelcsh:Microbiology579 - Microbiología03 medical and health sciencesgenome streamliningCopiotrophfreshwater VerrucomicrobiaCladeGeneOriginal ResearchGeneticsmetagenomicsPhylumVerrucomicrobiabiology.organism_classification030104 developmental biologyrhodopsinMetagenomicsEvolutionary biologynitrogen fixationFrontiers in Microbiology
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Strong regionality and dominance of anaerobic bacterial taxa characterize diazotrophic bacterial communities of the arcto-alpine plant species Oxyria…

2017

Arctic and alpine biomes are most often strongly nitrogen-limited, and hence biological nitrogen fixation is a strong driver of these ecosystems. Both biomes are characterized by low temperatures and short growing seasons, but they differ in seasonality of solar radiation and in soil water balance due to underlying permafrost in the Arctic. Arcto-alpine plant species are well-adapted to the low temperatures that prevail in their habitats, and plant growth is mainly limited by the availability of nutrients, in particular nitrogen, due to slow mineralization. Nitrogen fixing bacteria are likely important for plant growth in these habitats, but very little is known of these bacteria or forces …

0301 basic medicineMicrobiology (medical)endofyytitAlpine plantlcsh:QR1-502TUSSOCK TUNDRASaxifraga oppositifoliaMicrobiologylcsh:MicrobiologyCHINACARBON03 medical and health sciencesBotanyNIFH GENEDominance (ecology)Oxyria digynaOriginal Research2. Zero hungerClostridiumRhizospherePioneer speciesbiologynifHEcologySHRUBSta1183food and beverages15. Life on landbiology.organism_classificationNITROGEN-FIXING BACTERIASOILendophytic bacteria030104 developmental biologymikrobistoArctic13. Climate actiontypensidontaNitrogen fixationta1181GeobacterHIGH DIVERSITYpioneer plantsFrontiers in Microbiology
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Dissection of DLBCL microenvironment provides a gene expression-based predictor of survival applicable to formalin-fixed paraffin-embedded tissue

2018

Abstract Background Gene expression profiling (GEP) studies recognized a prognostic role for tumor microenvironment (TME) in diffuse large B-cell lymphoma (DLBCL), but the routinely adoption of prognostic stromal signatures remains limited. Patients and methods Here, we applied the computational method CIBERSORT to generate a 1028-gene matrix incorporating signatures of 17 immune and stromal cytotypes. Then, we carried out a deconvolution on publicly available GEP data of 482 untreated DLBCLs to reveal associations between clinical outcomes and proportions of putative tumor-infiltrating cell types. Forty-five genes related to peculiar prognostic cytotypes were selected and their expression …

0301 basic medicineOncologyMalePathologyHematologic MalignanciesBiopsyDatasets as TopicPredictive Value of TestDeconvolutionCohort StudiesTranscriptomeAntibodies Monoclonal Murine-Derived0302 clinical medicineprognosticatorsimmune system diseaseshemic and lymphatic diseasesTumor MicroenvironmentCluster Analysisdigital expression analysisRandomized Controlled Trials as TopicParaffin EmbeddingHematology; OncologyHematologyMiddle AgedPrognosisCorrigendaProgression-Free SurvivalAlgorithmOncology030220 oncology & carcinogenesisCell-of-originFemaleLymphoma Large B-Cell DiffuseSurvival AnalysiAlgorithmsHumanAdultmedicine.medical_specialtyStromal cellMicroenvironmentFormalin fixed paraffin embeddedPrognosiReproducibility of ResultDissection (medical)03 medical and health sciencesDigital expression analysiYoung AdultPrognosticatorPredictive Value of TestsFormaldehydeInternal medicinemedicineHumansProgression-free survivalGeneSurvival analysisAgedTumor microenvironmentCluster AnalysiProportional hazards modelbusiness.industryGene Expression ProfilingReproducibility of ResultsComputational BiologyOriginal Articlesmedicine.diseaseSurvival AnalysisGene expression profiling030104 developmental biologyDLBCLCohort StudieTranscriptomebusinessDiffuse large B-cell lymphomaDLBCL microenvironment deconvolution cell-of-origin digital expression analysis prognosticators
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