Search results for " Fragment."

showing 10 items of 1142 documents

Species richness and food web structure of soil decomposer community as affected by the size of habitat fragment and habitat corridors

2005

While most ecologists agree that the effects of fragmentation on diversity of organisms are predominantly negative and that the scale of fragmentation defines their severity, the role of habitat corridors in mitigating those effects still remains controversial. This ambiguousness rests largely on various difficulties in experimentation, a problem partially solved in the present paper by the use of easily manipulated soil communities. In this 2.5-year-long field experiment, we investigated the responses of soil decomposer organisms (from microbes to mesofaunal predators) to habitat fragment size, in the presence or absence of habitat corridors connecting the fragments. The habitat fragments …

0106 biological sciencesGlobal and Planetary Changeeducation.field_of_studyHabitat fragmentationEcologyEcology010604 marine biology & hydrobiologySoil biologyRare speciesPopulation15. Life on landWildlife corridorBiology010603 evolutionary biology01 natural sciencesDecomposerHabitat13. Climate actionparasitic diseasesEnvironmental ChemistrySpecies richnesseducationGeneral Environmental ScienceGlobal Change Biology
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Effects of small-scale habitat fragmentation, habitat corridors and mainland dispersal on soil decomposer organisms

2006

Abstract Habitat corridors have been suggested to be one possible way to reduce the often negative effects of habitat fragmentation. In the present experiment, we focused on small habitat fragments (humus patches) inhabited by soil decomposer organisms. These fragments were either unconnected or connected with each other by habitat (humus) corridors. Moreover, these systems were either isolated from the mainland by a dispersal barrier (plastic “walls”) or were open to dispersal from the mainland. The fragments and corridors were embedded in a matrix of mineral soil that was expected to be uninhabitable or at least an unpreferred habitat for the organisms studied. Undisturbed forest soil fun…

0106 biological sciencesHabitat fragmentationEcologyEcologySoil Science04 agricultural and veterinary sciences15. Life on landWildlife corridorBiology010603 evolutionary biology01 natural sciencesAgricultural and Biological Sciences (miscellaneous)HumusDecomposerHabitatAbundance (ecology)parasitic diseases040103 agronomy & agriculture0401 agriculture forestry and fisheriesBiological dispersalMainlandApplied Soil Ecology
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Soil decomposer community as a model system in studying the effects of habitat fragmentation and habitat corridors

2008

Abstract Due to the practical difficulties of experimental study of habitat fragmentation and habitat corridors at the landscape scale, the use of smaller-scale model systems has been offered as a feasible alternative to uncover the ecological phenomena taking place in fragmented environments. In this mini-review, we consider the applicability of the soil decomposer community as such a model system. For the most part, this article is based on the few studies that have explicitly addressed this question by experimental manipulations of the natural habitat of soil decomposer community. However, to broaden the view, we also capitalize upon studies focusing on the effects of isolation and soil …

0106 biological sciencesHabitat fragmentationEcologySoil biologyFragmentation (computing)Soil ScienceBiota04 agricultural and veterinary sciences15. Life on landWildlife corridor010603 evolutionary biology01 natural sciencesMicrobiologyDecomposerHabitat13. Climate action040103 agronomy & agriculture0401 agriculture forestry and fisheriesBiological dispersalEnvironmental scienceSoil Biology and Biochemistry
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Hydrogen peroxide induces programmed cell death features in cultured tobacco BY-2 cells, in a dose-dependent manner

2001

Active oxygen species (AOS), especially hydrogen peroxide, play a critical role in the defence of plants against invading pathogens and in the hypersensitive response (HR). This is characterized by the induction of a massive production of AOS and the rapid appearance of necrotic lesions is considered as a programmed cell death (PCD) process during which a limited number of cells die at the site of infection. This work was aimed at investigating the mode of cell death observed in cultures of BY-2 tobacco cells exposed to H(2)O(2). It was shown that H(2)O(2) is able to induce various morphological cell death features in cultured tobacco BY-2 cells. The hallmarks of cell death observed with fl…

0106 biological sciencesHypersensitive responseTobacco BY-2 cellsProgrammed cell deathPhysiologyApoptosisPlant ScienceDNA FragmentationBiology01 natural sciences[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics03 medical and health sciencesBotanyTobaccomedicineFragmentation (cell biology)Cell damageCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biologyCell Nucleus0303 health sciencesDose-Response Relationship DrugHydrogen Peroxide[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsmedicine.diseaseMolecular biologyChromatinPlants ToxicCell cultureApoptosisCULTURE DE CELLULESignal transduction010606 plant biology & botanySignal Transduction
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Habitat fragmentation and anthropogenic factors affect wildcat Felis silvestris silvestris occupancy and detectability on Mt Etna

2019

International audience; Knowledge of patterns of occupancy is crucial for planning sound biological management and for identifying areas which require paramount conservation attention. The European wildcat Felis silvestris is an elusive carnivore and is classified as ‘least concern' on the IUCN red list, but with a decreasing population trend in some areas. Sicily hosts a peculiar wildcat population, which deserves conservation and management actions, due to its isolation from the mainland. Patterns of occupancy for wildcats are unknown in Italy, and especially in Sicily. We aimed to identify which ecological drivers determined wildcat occurrence on Mt Etna and to provide conservation actio…

0106 biological sciencesOccupancybiology.animal_breedPopulationSettore BIO/05 - ZoologiaManagement Monitoring Policy and Law010603 evolutionary biology01 natural sciences010605 ornithology[SDV.BA.ZV]Life Sciences [q-bio]/Animal biology/Vertebrate ZoologyIUCN Red ListCarnivoreeducationEcology Evolution Behavior and SystematicsNature and Landscape Conservationeducation.field_of_studyHabitat fragmentationbiologyEcologyFelis silvestrisFragmentation (computing)15. Life on landGeographyHabitatEuropean wildcat[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Multilocus sequence typing confirms the close genetic inter-relatedness between three distinct flavescence doree phytoplasma strain clusters and grou…

2007

ABSTRACT Vineyards of southern France and northern Italy are affected by the flavescence dorée (FD) phytoplasma, a quarantine pathogen transmitted by the leafhopper of Nearctic origin Scaphoideus titanus . To better trace propagation of FD strains and identify possible passage between the vineyard and wild plant compartments, molecular typing of phytoplasma strains was applied. The sequences of the two genetic loci map and uvrB - degV , along with the sequence of the secY gene, were determined among a collection of FD and FD-related phytoplasmas infecting grapevine, alder, elm, blackberry, and Spanish broom in Europe. Sequence comparisons and phylogenetic analyses consistently indicated the…

0106 biological sciencesPhytoplasmaMolecular Sequence DataAlnus01 natural sciencesApplied Microbiology and BiotechnologyFLAVESCENCE DOREEMALADIE DES PLANTES03 medical and health sciencesPlant MicrobiologyPhylogeneticsMOLLICUTEBotanyPHYTOPLASMEVitisPhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biologyDNA PrimersPlant Diseases2. Zero hungerGenetics[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesEcologyPhylogenetic treebiologyBase SequenceJAUNISSEGrapevine yellowsSequence Analysis DNADIVERSITEbiology.organism_classificationScaphoideus titanusLeafhopperEuropeGene ComponentsPhytoplasmaGenes BacterialMultilocus sequence typingFlavescence doréePolymorphism Restriction Fragment Length010606 plant biology & botanyFood ScienceBiotechnology
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Sensitive measure of prevalence and parasitaemia of haemosporidia from European blackbird (Turdus merula) populations: value of PCR-RFLP and quantita…

2006

8 pages; International audience; Haemosporidian parasites are common in birds in which they act as an important selective pressure. While most studies so far have focused on the effect of their prevalence on host life-history traits, no study has measured the effect of parasitaemia. We developed molecular methods to detect, identify and quantify haemosporidia in 2 natural populations of the Blackbird Turdus merula. Three different parasite genotypes were found - 1 Haemoproteus and 2 Plasmodium. A PCR-RFLP screening revealed that only approximately 3% of blackbirds were free of parasites, compared to the 34% of uninfected birds estimated by blood smear screening. A quantitative PCR (q-PCR) a…

0106 biological sciencesPlasmodiumMESH: ParasitemiaMESH: Protozoan Infections AnimalMESH : Protozoan Infections AnimalMESH : PrevalenceMESH : Bird DiseasesMESH : ParasitemiaParasitemia01 natural sciencesPlasmodiumPolymerase Chain ReactionMESH: Bird Diseases030308 mycology & parasitologylaw.inventionPCR-RFLPlawGenotype[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingMESH: AnimalsPasseriformesProtozoan Infections AnimalMESH : Polymerase Chain ReactionPolymerase chain reactionGenetics0303 health sciencesbiologyInfectious DiseasesMESH: HaemosporidaMESH : Sensitivity and SpecificityPolymorphism Restriction Fragment Length[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/Parasitologyfield populationsprevalenceZoology010603 evolutionary biologySensitivity and SpecificityparasitaemiaApicomplexa03 medical and health sciencesparasitic diseasesAnimalsTurdus merula[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyMESH: PrevalenceMESH : Polymorphism Restriction Fragment Length[SDV.GEN]Life Sciences [q-bio]/GeneticsHost (biology)Bird DiseasesMESH: PlasmodiumMESH: Polymorphism Restriction Fragment LengthMESH: PasseriformesMESH: Polymerase Chain Reactionbiology.organism_classificationHaemosporidaMESH : PasseriformesMESH: Sensitivity and SpecificityMESH : PlasmodiumHaemoproteusVector (epidemiology)Animal Science and ZoologyParasitologyHaemoproteusMESH : AnimalsMESH : Haemosporida[ SDV.GEN ] Life Sciences [q-bio]/Geneticsreal-time PCR[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Conservation implications of change in antipredator behavior in fragmented habitat: Boreal rodent, the bank vole, as an experimental model

2015

Abstract Habitat fragmentation is known to cause population declines but the mechanisms leading to the decline are not fully understood. Fragmentation is likely to lead to changes in predation risk, which may cause behavioral responses with possible population level consequences. It has recently been shown that the awareness of predator presence, resulting in a fear response, strongly affects behavior and physiology of the prey individuals. Costs arising from fear may be as important for the prey population size as the direct killing of prey. We tested how predation risk in the form of scent of a specialist predator, the least weasel (Mustela nivalis nivalis), affects bank vole (Myodes glar…

0106 biological sciencesPopulationMyodes = Clethrionomys glareolus010603 evolutionary biology01 natural sciencesPredationindirect predationeducationpredator prey interactionEcology Evolution Behavior and SystematicsNature and Landscape Conservationeducation.field_of_studyHabitat fragmentationbiologyEcologyPopulation sizebreeding suppression15. Life on landbiology.organism_classification010601 ecologyBank volePopulation declineHabitatta1181fearVoleBiological Conservation
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Genetic structure of a European forest species, the edible dormouse ( Glis glis ): a consequence of past anthropogenic forest fragmentation?

2019

International audience; The genetic structure of forest animal species may allow the spatial dynamics of the forests themselves to be tracked. Two scales of change are commonly discussed: changes in forest distribution during the Quaternary, due to glacial/interglacial cycles, and current fragmentation related to habitat destruction. However, anthropogenic changes in forest distribution may have started well before the Quaternary, causing fragmentation at an intermediate time scale that is seldom considered. To explore the relative role of these processes, the genetic structure of a forest species with narrow ecological preferences, the edible dormouse (Glis glis), was investigated in a set…

0106 biological sciencesPopulationSettore BIO/05 - ZoologiaClimate changeearly anthropogenic deforestationBiologyphylogeography010603 evolutionary biology01 natural sciences03 medical and health sciencesDeforestationABC analysisGlacial periodeducationGliridaeEcology Evolution Behavior and Systematicsglobal change030304 developmental biologyEdible dormouse0303 health scienceseducation.field_of_studyforest fragmentation[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]Ecology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Fragmentation (computing)15. Life on landbiology.organism_classificationABC analysiHabitat destructionGenetic structure
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Stand out from the Crowd: Small-Scale Genetic Structuring in the Endemic Sicilian Pond Turtle

2020

The geographical pattern of genetic diversity was investigated in the endemic Sicilian pond turtle Emys trinacris across its entire distribution range, using 16 microsatellite loci. Overall, 245 specimens of E. trinacris were studied, showing high polymorphic microsatellite loci, with allele numbers ranging from 7 to 30. STRUCTURE and GENELAND analyses showed a noteworthy, geographically based structuring of the studied populations in five well-characterized clusters, supported by a moderate degree of genetic diversity (FST values between 0.075 and 0.160). Possible explanations for the genetic fragmentation observed are provided, where both natural and human-mediated habitat fragmentation o…

0106 biological sciencesRange (biology)Settore BIO/05 - ZoologiaEmydidae010603 evolutionary biology01 natural sciencesEmydidaemicrosatelliteslaw.invention03 medical and health sciencesgenetic structuringlawGenetic variabilityTurtle (robot)lcsh:QH301-705.5Sicily030304 developmental biologyNature and Landscape Conservation0303 health sciencesGenetic diversityHabitat fragmentationEcologybiologyEcologyEcological Modeling<i>Emys trinacris</i>biology.organism_classificationAgricultural and Biological Sciences (miscellaneous)lcsh:Biology (General)Emys trinacrisEmys trinacrisMicrosatelliteDiversity
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