Search results for " Modelling"

showing 10 items of 1055 documents

Modelling circulation in an ice-covered lake

2010

In deep ice-covered lakes with temperatures below 4 °C the heat flux from the bottom sediment results in a horizontal density gradient and a consequent flow along the bottom slope. Measurements in Lake Paajarvi, Finland, show a stable temperature field where a heat gain through the bottom and a heat loss through the ice nearly balance each other. The circulation is thermal with low velocities (less than 1.5 cm s -1 ). We used the 3D hydrodynamic Princeton Ocean Model as a tool to simulate the water circulation and the temperature distribution under the ice. The model forcing was based on field temperature measurements. The model simulations suggest that in midwinter the velocity field of th…

0106 biological sciences010504 meteorology & atmospheric sciences010604 marine biology & hydrobiologyFlow (psychology)lcsh:QE1-996.5SedimentForcing (mathematics)Atmospheric sciences01 natural sciencesPrinceton Ocean ModelCurrent (stream)lcsh:GeologyCirculation (fluid dynamics)Heat fluxhydrodynamic modelling13. Climate actionAnticycloneClimatologyGeneral Earth and Planetary Sciences14. Life underwaterLake Pääjärvi.Geologycurrents0105 earth and related environmental sciencesWater Science and TechnologyEstonian Journal of Earth Sciences
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Mapping a ‘cryptic kingdom’: Performance of lidar derived environmental variables in modelling the occurrence of forest fungi

2016

Abstract Fungi are crucial to forest ecosystem function and provide important provisioning, regulating, supporting, and cultural ecosystem services. As major contributors to biomass decomposition, fungi are important to forest biogeochemical cycling and maintenance of vertebrate animal diversity. Many forest plant species live in a symbiotic relationship with a fungal partner that helps a host plant to acquire nutrients and water. In addition, edible fungi are recreationally as well as economically valuable. However, most fungi live in very cryptic locations (e.g. in soils and interior plant tissues) and are only visible when their ephemeral fruiting bodies are produced, making fungal occur…

0106 biological sciences010504 meteorology & atmospheric sciencesRange (biology)Soil ScienceBiology010603 evolutionary biology01 natural sciencesEcosystem servicesremote sensingAbundance (ecology)Forest ecologymushroomComputers in Earth Sciences0105 earth and related environmental sciencesNon-timber forest productBiomass (ecology)EcologySpecies diversityGeologydistribution modellingecosystem serviceHabitatta1181fruiting bodynon-timber forest productALSRemote Sensing of Environment
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Stochastic models for phytoplankton dynamics in Mediterranean Sea

2016

Abstract In this paper, we review some results obtained from three one-dimensional stochastic models, which were used to analyze picophytoplankton dynamics in two sites of the Mediterranean Sea. Firstly, we present a stochastic advection–reaction–diffusion model to describe the vertical spatial distribution of picoeukaryotes in a site of the Sicily Channel. The second model, which is an extended version of the first one, is used to obtain the vertical stationary profiles of two groups of picophytoplankton, i.e. Pelagophytes and Prochlorococcus, in the same marine site as in the previous case. Here, we include intraspecific competition of picophytoplanktonic groups for limiting factors, i.e.…

0106 biological sciences010504 meteorology & atmospheric sciencesStochastic modellingRandom processeAtmospheric sciences01 natural sciencesDeep chlorophyll maximum; Marine ecosystems; Phytoplankton dynamics; Random processes; Spatial ecology; Stochastic differential equations; Ecology Evolution Behavior and Systematics; Ecological ModelingStochastic differential equationMediterranean seaMarine ecosystemSpatial ecology14. Life underwaterPhytoplankton dynamicEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesDeep chlorophyll maximumStochastic differential equationbiologyStochastic processEcology010604 marine biology & hydrobiologyEcological Modelingbiology.organism_classificationEcology Evolution Behavior and SystematicSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Light intensitySpatial ecologyDeep chlorophyll maximumProchlorococcusEcological Complexity
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Staying cool: preadaptation to temperate climates required for colonising tropical alpine-like environments.

2018

Plant species tend to retain their ancestral ecology, responding to temporal, geographic and climatic changes by tracking suitable habitats rather than adapting to novel conditions. Nevertheless, transitions into different environments or biomes still seem to be common. Especially intriguing are the tropical alpine-like areas found on only the highest mountainous regions surrounded by tropical environments. Tropical mountains are hotspots of biodiversity, often with striking degrees of endemism at higher elevations. On these mountains, steep environmental gradients and high habitat heterogeneity within small spaces coincide with astounding species diversity of great conservation value. The …

0106 biological sciences0301 basic medicineBiomeBiodiversity & ConservationBiodiversityPlant Science010603 evolutionary biology01 natural sciencesFloristics & Distribution03 medical and health sciencesAlpine speciationData analysis & Modellinglcsh:BotanyTemperate climateEndemismEcology Evolution Behavior and SystematicsPhylogenyisland biogeographyEcologyCenozoicWorldTropicsbiome changeniche conservatismSpatial heterogeneitylcsh:QK1-989030104 developmental biologyGeographyAngiospermaeHabitatBiogeographyBiological dispersalResearch ArticlePhytoKeys
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Parallel diversifications of Cremastosperma and mosannona (annonaceae), tropical rainforest trees tracking neogene upheaval of South America

2018

Much of the immense present day biological diversity of Neotropical rainforests originated from the Miocene onwards, a period of geological and ecological upheaval in South America. We assess the impact of the Andean orogeny, drainage of Lake Pebas and closure of the Panama isthmus on two clades of tropical trees ( Cremastosperma , ca 31 spp.; and Mosannona , ca 14 spp.; both Annonaceae). Phylogenetic inference revealed similar patterns of geographically restricted clades and molecular dating showed diversifications in the different areas occurred in parallel, with timing consistent with Andean vicariance and Central American geodispersal. Ecological niche modelling approaches show phyloge…

0106 biological sciences0301 basic medicineDIVERSITY01 natural sciencesNiche modellingDISPERSALlcsh:ScienceMultidisciplinarybiologyEcologyAmazon rainforest70Biology (Whole Organism)ANDEAN UPLIFTPE&RCBiosystematieknicheGeographyGeodispersalinternationalISTHMUSMolecular datingCLADESPebas systemResearch Article1001Neotropics201004PHYLOGENY RECONSTRUCTIONRainforest010603 evolutionary biologymodelling03 medical and health sciencesHISTORICAL BIOGEOGRAPHYDIVERGENCEVicarianceSPECIATIONLaboratorium voor NematologieEcological nicheAndean orogenyAndean orogenyBiology and Life Sciencesbiology.organism_classificationEVOLUTION030104 developmental biologyMosannonaPanama isthmusBiosystematicslcsh:QEPSLaboratory of NematologyTropical rainforestRoyal Society Open Science
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Origin and distribution of desert ants across the Gibraltar Straits

2017

The creation of geographic barriers has long been suspected to contribute to the formation of new species. We investigated the phylogeography of desert ants in the western Mediterranean basin in order to elucidate their mode of diversification. These insects which have a low dispersal capacity are recently becoming important model systems in evolutionary studies. We conducted an extensive sampling of species belonging to the Cataglyphis albicans group in the Iberian Peninsula (IP) and the northern Morocco (North Africa; NA). We then combined genetic, chemical and morphological analyses. The results suggest the existence of at least three and five clades in the IP and NA, respectively, whose…

0106 biological sciences0301 basic medicineMaleParapatric speciation01 natural sciencesMediterranean BasinMonophylyfylogeografiaAfrica NorthernmuurahaisetPhylogenyComputingMilieux_MISCELLANEOUS[SDV.EE]Life Sciences [q-bio]/Ecology environmentLikelihood FunctionsPrincipal Component AnalysisbiologyEcologyCataglyphisDiscriminant Analysisgenital traitsBiological EvolutionEuropeMoroccoPhylogeographyAllopatric speciation010603 evolutionary biologythermophilyModels Biological03 medical and health sciencesGeneticsAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsDemographyGibraltarAntscuticular hydrocarbonsGenetic VariationBayes Theorem15. Life on landbiology.organism_classificationHydrocarbonsEnvironmental niche modellingPhylogeography030104 developmental biologyCataglyphisglaciationsBiological dispersalta1181Microsatellite Repeats[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Hybridization, ecogeographical displacement and the emergence of new lineages – A genotyping‐by‐sequencing and ecological niche and species distribut…

2021

Ecogeographical displacement of homoploid hybrid lineages from their parents is well documented and considered an important mechanism to achieve reproductive isolation. In this study, we investigated the origin of the flowering plant species Sempervivum tectorum in the Massif Central (France) through homoploid hybridization between lineages of the species from the Rhine Gorge area (Germany) and the Pyrenees (France). We used genotyping-by-sequencing genetic data as evidence for the hybrid origin of the Massif Central lineage, and WorldClim climatic data and soil pH and soil temperature data collected by us for ecological niche and species distribution modelling. We could show that the Massi…

0106 biological sciences0301 basic medicineReproductive IsolationClimate ChangeLineage (evolution)NicheAdaptation BiologicalParapatric speciationBiologyCrassulaceaeModels Biological010603 evolutionary biology01 natural sciences570 Life sciences03 medical and health sciencesEcosystemEcology Evolution Behavior and SystematicsEcological nichegeographyPloidiesgeography.geographical_feature_categoryMassifReproductive isolationEnvironmental niche modellingEuropePhylogeography030104 developmental biologyEvolutionary biologySympatric speciationHybridization Genetic570 BiowissenschaftenJournal of Evolutionary Biology
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Coping with Difficult Weather and Snow Conditions : Reindeer herders’ views on climate change impacts and coping strategies

2016

Winter is a critical season for reindeer herding, with the amount and quality of snow being among the most important factors determining the condition of reindeer and the annual success of the livelihood. Our first aim was to model the future (2035–2064) snow conditions in northern Finland, especially the quantities related to ground ice and/or ice layers within the snow pack, exceptionally deep snow and late snow melt. Secondly, we studied the strategies by which herders cope with the impacts of difficult weather and snow conditions on herding by interviewing 21 herders. SNOWPACK simulations indicate that snow cover formation will be delayed by an average of 19 days and snow will melt 16 d…

0106 biological sciencesAtmospheric Science010504 meteorology & atmospheric sciencesta1172educationGeography Planning and Developmentta1171Climate changeSnow modelinglcsh:QC851-999Management Monitoring Policy and Law114 Physical sciences010603 evolutionary biology01 natural sciencesReindeer herdingEnvironmental protectiontalviClimate changeHerding1172 Environmental sciences0105 earth and related environmental sciencesTraditional knowledge (TK)2. Zero hungerGlobal and Planetary ChangeLand useEcologyselviytyminenWinter15. Life on landSnowpackLivelihoodSnowreindeer herdingclimate change13. Climate actionSnowmeltSustainabilityEnvironmental sciencelcsh:Meteorology. Climatologytraditional knowledgeCopingsnow modelling
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The Impact of Variations in the Climate on Seasonal Dynamics of Phytoplankton

2009

Phytoplankton, an assemblage of suspended, primarily autotrophic single cells and colonies, forms part of the base of the pelagic food chain in lakes. The responses of phytoplankton to anthropogenic pressures frequently provide the most visible indication of a long-term change in water quality. Several attributes related to the growth and composition of phytoplankton, such as their community structure, abundance as well as the frequency and the intensity of blooms, are included as indicators of water quality in the Water Framework Directive. The growth and seasonal succession of phytoplankton is regulated by a variety of external as well as internal factors (Reynolds et al., 1993; Reynolds,…

0106 biological sciencesCatchment ModellingClimate Change010604 marine biology & hydrobiologyCommunity structureClimate changePelagic zoneLake Modelling15. Life on landSpring bloom010603 evolutionary biology01 natural sciences6. Clean waterFood chainOceanographyWater column13. Climate actionddc:570Water QualityClimatologyPhytoplanktonEnvironmental science14. Life underwaterWater quality
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Accounting for preferential sampling in species distribution models

2019

D. C., A. L. Q. and F. M. would like to thank the Ministerio de Educación y Ciencia (Spain) for financial support (jointly financed by the European Regional Development Fund) via Research Grants MTM2013‐42323‐P and MTM2016‐77501‐P, and ACOMP/2015/202 from Generalitat Valenciana (Spain). Species distribution models (SDMs) are now being widely used in ecology for management and conservation purposes across terrestrial, freshwater, and marine realms. The increasing interest in SDMs has drawn the attention of ecologists to spatial models and, in particular, to geostatistical models, which are used to associate observations of species occurrence or abundance with environmental covariates in a fi…

0106 biological sciencesComputer scienceQH301 BiologySpecies distributionPoint processesStochastic partial differential equation01 natural scienceshttp://aims.fao.org/aos/agrovoc/c_6774EspèceAbundance (ecology)StatisticsPesqueríasQAOriginal Researchhttp://aims.fao.org/aos/agrovoc/c_241990303 health sciencesEcologyU10 - Informatique mathématiques et statistiquesSampling (statistics)Integrated nested Laplace approximationstochastic partial differential equationVariable (computer science)symbolsÉchantillonnageSpecies Distribution Models (SDMs)Modèle mathématiqueBayesian probabilityNDASDistribution des populations010603 evolutionary biologyQH30103 medical and health sciencessymbols.namesakeCovariateQA MathematicsSDG 14 - Life Below WaterCentro Oceanográfico de Murciaspecies distribution modelsRelative species abundanceEcology Evolution Behavior and Systematicspoint processes030304 developmental biologyNature and Landscape Conservationhttp://aims.fao.org/aos/agrovoc/c_6113http://aims.fao.org/aos/agrovoc/c_7280Markov chain Monte Carlointegrated nested Laplace approximationU30 - Méthodes de rechercheBayesian modelling
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