Search results for " Modifications"

showing 10 items of 61 documents

Small genomes and the difficulty to define minimal translation and metabolic machineries

2015

The notion of minimal life has sparked the interest of scientists in different fields, ranging from the origin-of-life research to biotechnology-oriented synthetic biology. Whether the interest is focused on the emergence of protocells out of prebiotic systems or the design of a cell chassis ready to incorporate new devices and functions, proposing minimal combinations of genes for life is not a trivial task. Using comparative genomics and biochemistry of endosymbionts (i.e., intracellular mutualistic symbionts) and intracellular parasites, a decade ago we proposed the core of a minimal gene set for a simple heterotrophic cell adapted to a chemically complex environment. In this work, we di…

Muller’s ratchettRNA post-transcriptional modificationslcsh:EvolutionMetabolic networkComputational biologyBiologyGenomeMicrobiology03 medical and health sciencesSynthetic biologylcsh:QH540-549.5lcsh:QH359-425GeneEcology Evolution Behavior and Systematics030304 developmental biologyComparative genomicsGenetics0303 health sciencesstreamlining hypothesisEcology030306 microbiologyMuller's ratchetminimal metabolismminimal cellMuller's ratchetMinimal genomeSynthetic Biologylcsh:EcologyFlux (metabolism)Black Queen HypothesisFrontiers in Ecology and Evolution
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Nanocarrier based on halloysite and fluorescent probe for intracellular delivery of peptide nucleic acids

2022

The development of systems able to deliver genetic material into a target site is a challenge for modern medicine. Single-stranded peptide nucleic acids have attracted attention as promising therapeutic molecules for diagnostic and gene therapy. However, their poor cell membrane permeability represents a drawback for biomedical applications. Halloysite nanotubes (HNTs) are emerging materials in drug delivery applications both for their ability to penetrate cell membranes and for enhancing the solubility of drugs in biological media. Herein, we report the first example of the use of a nanocarrier based on halloysite labelled with fluorescent switchable halochromic oxazine molecules, to deliv…

Peptide Nucleic AcidsNanotubesHalloysite nanotubesHalloysite nanotubes PNA Covalent modificationsSettore CHIM/06 - Chimica OrganicaHalochromic switchCovalent modificationsSettore CHIM/12 - Chimica Dell'Ambiente E Dei Beni CulturaliSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsBiomaterialsColloid and Surface ChemistryCell Line TumorCellular uptakeSettore BIO/14 - FarmacologiaClayPNAFluorescent Dyes
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Curcumin Affects HSP60 Folding Activity and Levels in Neuroblastoma Cells.

2020

The fundamental challenge in fighting cancer is the development of protective agents able to interfere with the classical pathways of malignant transformation, such as extracellular matrix remodeling, epithelial−mesenchymal transition and, alteration of protein homeostasis. In the tumors of the brain, proteotoxic stress represents one of the main triggering agents for cell transformation. Curcumin is a natural compound with anti-inflammatory and anti-cancer properties with promising potential for the development of therapeutic drugs for the treatment of cancer as well as neurodegenerative diseases. Among the mediators of cancer development, HSP60 is a key factor for the maintenance of…

Protein FoldingCurcuminCell SurvivalCellCatalysisMalignant transformationCell Linelcsh:ChemistryInorganic ChemistryMitochondrial Proteinschemistry.chemical_compoundNeuroblastomaDownregulation and upregulationHeat shock proteinmedicinepost-translational modificationsHumansSecretionPhysical and Theoretical Chemistrylcsh:QH301-705.5Molecular BiologySpectroscopyCell ProliferationHeat shock proteinDose-Response Relationship DrugCommunicationOrganic Chemistrymolecular chaperonesUbiquitinationGeneral MedicineChaperonin 60Computer Science ApplicationsCell biologyUp-RegulationBrain tumorGene Expression Regulation Neoplasticmedicine.anatomical_structurelcsh:Biology (General)lcsh:QD1-999chemistryApoptosisheat shock proteinsMolecular chaperoneCurcuminbrain tumorsHSP60Post-translational modificationHSP60extracellular HSP60International journal of molecular sciences
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Editorial: The Role of Protein Post-Translational Modifications in Protein-RNA Interactions and RNP Assemblies

2022

RNP granulesEditorialQH301-705.5Molecular BiosciencesRNA-protein interactionsPTMs (post-translational modifications)phase separationBiology (General)Biochemistry Genetics and Molecular Biology (miscellaneous)Molecular BiologyBiochemistryintrinsically disordered region (IDR)Frontiers in Molecular Biosciences
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The Expanding Constellation of Histone Post-Translational Modifications in the Epigenetic Landscape

2021

The emergence of a nucleosome-based chromatin structure accompanied the evolutionary transition from prokaryotes to eukaryotes. In this scenario, histones became the heart of the complex and precisely timed coordination between chromatin architecture and functions during adaptive responses to environmental influence by means of epigenetic mechanisms. Notably, such an epigenetic machinery involves an overwhelming number of post-translational modifications at multiple residues of core and linker histones. This review aims to comprehensively describe old and recent evidence in this exciting field of research. In particular, histone post-translational modification establishing/removal mechanism…

Settore BIO/11 - Biologia MolecolareReviewComputational biologyQH426-470Epigenesis GeneticEvolution MolecularHistonesGeneticsNucleosomeEpigeneticsPhosphorylationGenetics (clinical)GenomeepigeneticsbiologynucleosomeEukaryotaEvolutionary transitionsNucleosomesChromatinHistoneProkaryotic Cellshistone post-translational modificationsbiology.proteinPosttranslational modificationchromatinProtein Processing Post-TranslationalGenes
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Modification of hosts' behavior by a parasite: field evidence for adaptive manipulation.

2007

9 pages; International audience; Parasites relying on trophic transmission to complete their life cycles often induce modifications of their host's behavior in ways that may increase their susceptibility to predation by final hosts. These modifications have often been interpreted as parasite adaptations, but very few studies have demonstrated that host manipulation has fitness benefits for the parasite. The aim of the present study was to address the adaptive significance of parasite manipulation by coupling observations of behavioral manipulation to estimates of trophic transmission to the definitive host in the natural environment. We show that the acanthocephalan parasite Pomphorhynchus …

[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyFood ChainPopulation DynamicsMESH : Host-Parasite Interactionscomplex life cyclesMESH : Predatory BehaviorPredationAcanthocephalaHost-Parasite InteractionsPomphorhynchus laevisMESH : Parasite Egg Countbehavioral modificationsGammarus roeseliMESH : EcosystemParasite Egg Count[SDV.BID.EVO] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE][ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsadaptive manipulationAmphipodaMESH : Population DynamicsParasite Egg CountEcology Evolution Behavior and SystematicsEcosystemMESH : Adaptation PhysiologicalLife Cycle StagesbiologyHost (biology)EcologyMESH : AcanthocephalaIntermediate host[SDV.EE.IEO] Life Sciences [q-bio]/Ecology environment/Symbiosistrophic transmissionMESH : Life Cycle Stagesbiology.organism_classificationMESH : AmphipodaAdaptation PhysiologicalMESH : Food ChainGammarus pulexPulex[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Predatory BehaviorPomphorhynchus laevisMESH : Animals[SDV.MP.PAR] Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology
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Les histones déacétylases de type 2 (HD2): des régulateurs importants de l'immunité innée chez le tabac

2013

[SDV] Life Sciences [q-bio][SDE] Environmental Sciences[SDV]Life Sciences [q-bio][SDE]Environmental Sciencesnucleuspost-translational modifications[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal Biologytobacosignal transduction
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Protein S-nitrosylation: specificity and identification strategies in plants

2015

SPE Pôle IPM UB; International audience; The role of nitric oxide (NO) as a major regulator of plant physiological functions has become increasingly evident. To further improve our understanding of its role, within the last few years plant biologists have begun to embrace the exciting opportunity of investigating protein S-nitrosylation, a major reversible NO-dependent post-translational modification (PTM) targeting specific Cys residues and widely studied in animals. Thanks to the development of dedicated proteomic approaches, in particular the use of the biotin switch technique (BST) combined with mass spectrometry, hundreds of plant protein candidates for S-nitrosylation have been identi…

[SDV]Life Sciences [q-bio]Regulatornitric oxide;S-nitrosylation;post-translational modification;plant;signaling;biotin switcht echniqueplantComputational biologyReview ArticleBiologyBioinformaticsNitric Oxidelcsh:Chemistrybiotin switcht echniqueProtein S-nitrosylationpost-translational modifications[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFunctional studiesGeneral ChemistryS-NitrosylationPlantsS-nitrosylationStructure and functionChemistryBiotin switchpost-translational modificationlcsh:QD1-999Plant protein[SDE]Environmental SciencesBiotin Switch TechniqueIdentification (biology)signalingFrontiers in Chemistry
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Alcoholic Parotid Sialosis: A Structural and Ultrastructural Study

2004

OBJETIVOS: El propósito del presente trabajo fue establecer posibles diferencias histopatológicas entre los estadíos iniciales y terminales de la sialosis alcohólica, patología que generalmente involucra hipertrofia parotídea y afecta estructuralmente en diverso grado a las demás glándulas salivales. DISEÑO DEL ESTUDIO: se analizaron y compararon las modificaciones estructurales y ultraestructurales de glándulas parótidas provenientes de: A) biopsias de alcohólicos crónicos con diagnóstico clínico de cirrosis hepática, de las que una fracción fue procesada para microscopía óptica (MO) y otra fracción fue fijada en glutaraldehído y procesada para microscopía electrónica de trasmisión (MET) J…

alcoholismParótidaalcoholismosialosismodificaciones estructurales y ultraestructuralesstructural and ultrastructural modificationsParotid
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The Histone Deacetylase Inhibitor ITF2357 (Givinostat) Targets Oncogenic BRAF in Melanoma Cells and Promotes a Switch from Pro-Survival Autophagy to …

2022

Histone deacetylase inhibitors (HDACI) are epigenetic compounds that have been widely considered very promising antitumor agents. Here, we focus on the effects of the pan-HDAC inhibitor ITF2357 (Givinostat) in comparison with SAHA (Vorinostat) in melanoma cells bearing BRAF V600E oncogenic mutation. Our results indicate both ITF2357 and SAHA dose-dependently reduce the viability of BRAF-mutated SK-MEL-28 and A375 melanoma cells. The comparison of IC50 values revealed that ITF2357 was much more effective than SAHA. Interestingly, both inhibitors markedly decreased oncogenic BRAF protein expression levels, ITF2357 being the most effective compound. Moreover, the BRAF decrease induced by ITF23…

autophagyHDAC inhibitorsepigenetic modificationsSettore BIO/10 - BiochimicaapoptosisMedicine (miscellaneous)HDAC inhibitors; BRAF; melanoma cells; autophagy; apoptosis; epigenetic modificationsmelanoma cellsGeneral Biochemistry Genetics and Molecular BiologyBRAFBiomedicines
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