Search results for " PHYLOGENY"
showing 10 items of 116 documents
Phylogenetic and biogeographical inferences for Pancratium (Amaryllidaceae), with an emphasis on the Mediterranean species based on plastid sequence …
2012
The phylogenetics and biogeography of Pancratium (Amaryllidaceae) were investigated, with a focus on the Mediterranean and adjacent areas, with the aim of contributing new information towards a better understanding of the evolutionary history of the genus and the taxonomic placement of P. linosae and P. hirtum. To address these questions, we sequenced four plastid DNA markers: the ndhF and rbcL genes, the trnL(UAA)-trnF(GAA) intergenic spacer and the trnL(UAA) intron, analysing them using parsimony, likelihood and Bayesian approaches. The results show that the relationships among the majority of the species are resolved; however, the relationships of one of the major clades of the genus are…
Zoonotic Dirofilaria immitis and Dirofilaria repens infection in humans and an integrative approach to the diagnosis
2021
Abstract Dirofilariosis by Dirofilaria immitis and Dirofilaria repens is endemic in dogs from countries of the Mediterranean basin. Both species may infect humans, with most of the infected patients remaining asymptomatic. Based on the recent description of the southernmost hyperendemic European focus of heartworm disease in dogs from the Pelagie archipelagos, we performed a serological and molecular survey in human population of that area. Human blood samples were collected in the islands of Linosa (n=101) and Lampedusa (n=296) and tested by ELISA and molecular test for the detection of D. immitis and D. repens. Samples were also screened for filarioid-associated endosymbionts, Wolbachia s…
High‐resolution 3D forest structure explains ecomorphological trait variation in assemblages of saproxylic beetles
2022
1. Climate, topography and the 3D structure of forests are major drivers affecting local species communities. However, little is known about how the specific functional traits of saproxylic (wood-living) beetles, involved in the recycling of wood, might be affected by those environmental characteristics. 2. Here, we combine ecological and morphological traits available for saproxylic beetles and airborne laser scanning (ALS) data in Bayesian trait-based joint species distribution models to study how traits drive the distributions of more than 230 species in temperate forests of Europe. 3. We found that elevation (as a proxy for temperature and precipitation) and the proportion of conifers p…
A new Lagomorph from the late Miocene of Chad (central Africa)
2007
A new species of the genus Serengetilagus, here named S. tchadensis n. sp., is described from Toros Menalla deposits, Late Miocene of Djurab Erg (North Chad, central Africa). It shows primitive features, such as a simple archaeolagine-type p3, with only two main external folds, and upper cheek teeth strongly widened with wear. Its size and skeletal features resemble S. praecapensis from the Middle Pliocene of Laetoli (Tanzania). They differ in several cranial and dental features (choanae width, zygoma, orbits, basicranial-basifacial angle, lack of hypoflexus in P2, short and asymmetric hypoflexus in P3-M2, lack of lingual folds in p3, etc). Individual variations in S. tchadensis n. sp. appr…
The universal ancestor : an unfinished reconstruction
2015
El cenancestro se define como el ultimo ancestro comun de todos los seres vivos que existen actualmente. Su naturaleza se ha inferido a partir de la identificacion de los genes homologos entre los linajes de arqueas, bacterias y eucariontes. Estas inferencias indican que el cenancestro poseia un sistema de traduccion de proteinas relativamente moderno y era similar en complejidad a una celula actual. Sin embargo, las enzimas claves que se encargan tanto de la replicacion del material genetico como de la biosintesis de membranas celulares no son homologas entre los linajes celulares. Aqui revisamos brevemente la historia del concepto del ultimo ancestro comun y las distintas hipotesis que se…
Data from: The legacy of a vanished sea: a high level of diversification within a European freshwater amphipod species complex driven by 15 My of Par…
2015
The formation of continental Europe in the Neogene was due to the regression of the Tethys Ocean and of the Paratethys Sea. The dynamic geology of the area and repetitious transitions between marine and freshwater conditions presented opportunities for the colonization of newly emerging hydrological networks and diversification of aquatic biota. Implementing mitochondrial and nuclear markers in conjunction with a large-scale sampling strategy, we investigated the impact of this spatiotemporal framework on the evolutionary history of a freshwater crustacean morphospecies. The Gammarus balcanicus species complex is widely distributed in the area previously occupied by the Paratethys Sea. Our …
Chromosomal dynamics in platyrrhinae by mapping bacs probes
2012
molecular cytogenetics, cloned DNA probe, new evolutionary centromere, human synteny 4, phylogeny
Evidence for Positive Selection in the Capsid Protein-Coding Region of the Foot-and-Mouth Disease Virus (FMDV) Subjected to Experimental Passage Regi…
2001
We present sequence data from two genomic regions of foot-and-mouth disease virus (FMDV) subjected to several experimental passage regimens. Maximum-likelihood estimates of the nonsynonymous-to-synonymous rate ratio parameter (dN/dS) suggested the action of positive selection on some antigenic sites of the FMDV capsid during some experimental passages. These antigenic sites showed an accumulation of convergent amino acid replacements during massive serial cytolytic passages and also in persistent infections of FMDV in cell culture. This accumulation was most significant at the antigenic site A (the G-H loop of capsid VP1), which includes an Arg-Gly-Asp (RGD) cellular recognition motif. Our …
Non-monophyly of the “cydnoid” complex within Pentatomoidea (Hemiptera: Heteroptera) revealed by Bayesian phylogenetic analysis of nuclear rDNA seque…
2017
The “cydnoid” complex of pentatomoid families, including Cydnidae, Parastrachiidae, Thaumastellidae, and Thyreocoridae, is morphologically defined by the presence of an array of more or less flattened stout setae (called coxal combs), situated on the distal margin of coxae. These structures, suggested to prevent the coxal-trochanteral articulation from injuries caused by particles of soil, sand or dust, by their nature and function are unknown elsewhere in the Heteroptera. As such, coxal combs were regarded as a synapomorphy of this group of families, and enabled the definition of it as a monophylum. In this study, the monophyly of the “cydnoid” complex of families is tested for the first t…
Supplementary material 5 from: Vecchi M, Stec D (2021) Integrative descriptions of two new Macrobiotus species (Tardigrada, Eutardigrada, Macrobiotid…
2021
MrBayes analysis input file with the alignment