Search results for " PROTEIN"

showing 10 items of 12147 documents

Essentiality Is a Strong Determinant of Protein Rates of Evolution during Mutation Accumulation Experiments in Escherichia coli

2016

[EN] The Neutral Theory of Molecular Evolution is considered the most powerful theory to understand the evolutionary behavior of proteins. One of the main predictions of this theory is that essential proteins should evolve slower than dispensable ones owing to increased selective constraints. Comparison of genomes of different species, however, has revealed only small differences between the rates of evolution ofessential and nonessential proteins. In some analyses, these differences vanish once confounding factors are controlled for, whereas in other cases essentiality seems to have an independent, albeit small, effect. It has been argued that comparing relatively distant genomes may entai…

0106 biological sciences0301 basic medicineBiologymedicine.disease_cause010603 evolutionary biology01 natural sciencesGenomeProtein evolutionEvolution Molecular03 medical and health sciencesGeneticsmedicineEscherichia colidN/dSProtein lengthEscherichia coliGeneEcology Evolution Behavior and Systematics2. Zero hungerGeneticsExperimental evolutionGenes EssentialModels GeneticEscherichia coli ProteinsGene Expression Regulation BacterialRates of evolutionMutation AccumulationNeutral theoryEssentiality030104 developmental biologyExperimental evolutionMutationNeutral theory of molecular evolutionGenome BacterialResearch Article
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Characterization of the Copper Transporters from Lotus spp. and Their Involvement under Flooding Conditions

2019

Forage legumes are an important livestock nutritional resource, which includes essential metals, such as copper. Particularly, the high prevalence of hypocuprosis causes important economic losses to Argentinian cattle agrosystems. Copper deficiency in cattle is partially due to its low content in forage produced by natural grassland, and is exacerbated by flooding conditions. Previous results indicated that incorporation of Lotus spp. into natural grassland increases forage nutritional quality, including higher copper levels. However, the biological processes and molecular mechanisms involved in copper uptake by Lotus spp. remain poorly understood. Here, we identify four genes that encode p…

0106 biological sciences0301 basic medicineBiologíalegumesLotusCOPPERFLOODING01 natural scienceslcsh:ChemistryCopper transportersProtein-fragment complementation assayCation Transport Proteinslcsh:QH301-705.5SpectroscopyPlant Proteinsbiologyfood and beveragesGeneral MedicinePhenotypeComputer Science ApplicationsLEGUMESSaccharomyces cerevisiaechemistry.chemical_elementCatalysisArticleInorganic Chemistry03 medical and health sciencesfloodingStress PhysiologicalFORAGEBotanymedicineCiencias AgrariasPhysical and Theoretical ChemistryMolecular BiologyGeneOrganic Chemistryfungiforagebiology.organism_classificationmedicine.disease//purl.org/becyt/ford/4.5 [https]CopperTRANSPORTERScopper transportersYeastFloods030104 developmental biologychemistrylcsh:Biology (General)lcsh:QD1-999CIENCIAS AGRÍCOLASLotusOtras Ciencias AgrícolasCopper deficiency//purl.org/becyt/ford/4 [https]Copper010606 plant biology & botanyInternational Journal of Molecular Sciences
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Specific binding of Bacillus thuringiensis Cry1Ea toxin, and Cry1Ac and Cry1Fa competition analyses in Anticarsia gemmatalis and Chrysodeixis include…

2019

AbstractAnticarsia gemmatalis (velvetbean caterpillar) and Chrysodeixis includens (soybean looper) are two important defoliation pests of soybeans. In the present study, we have investigated the susceptibility and brush border membrane-binding properties of both species to Bacillus thuringiensis Cry1Ea toxin. Bioassays performed in first-instar larvae demonstrated potent activity against both soybean pests in terms of mortality or practical mortality. Competition-binding studies carried out with 125Iodine-labelled Cry1Ea, demonstrated the presence of specific binding sites on the midgut brush border membrane vesicles (BBMV) of both insect species. Heterologous competition-binding experiment…

0106 biological sciences0301 basic medicineBrush borderlcsh:MedicineMoths01 natural sciencesArticleMicrobiologyApplied microbiology03 medical and health sciencesHemolysin ProteinsBacterial ProteinsChrysodeixis includensBacillus thuringiensisEnvironmental biotechnologyAnimalsCaterpillarlcsh:ScienceMultidisciplinaryBinding SitesbiologyBacillus thuringiensis ToxinsMicrovillifungilcsh:Rfood and beveragesMidgutbiology.organism_classificationEndotoxins010602 entomologyAnticarsia gemmatalis030104 developmental biologyCry1AcBiological Control AgentsLarvaBiological Assaylcsh:QPEST analysisSoybeansScientific Reports
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Two maize Kip-related proteins differentially interact with, inhibit and are phosphorylated by cyclin D–cyclin-dependent kinase complexes

2017

Highlight Maize Kip-related proteins can be differentially phosphorylated by different cyclin D–cyclin-dependent kinase complexes and this influences their performance as cyclin-dependent kinase inhibitors.

0106 biological sciences0301 basic medicineCDKsPhysiologyCyclin DPlant Developmental BiologyPlant ScienceZea mays01 natural scienceslaw.inventionCyclins D03 medical and health sciencesGene Expression Regulation PlantCyclin-dependent kinaselawCyclin DPhosphorylationKinase activityKinase inhibitionCyclin-Dependent Kinase Inhibitor ProteinsPlant ProteinsbiologyKinaseKRP phosphorylationfood and beveragesICK/KRPsCyclin-Dependent Kinases030104 developmental biologyZea mays.Biochemistrybiology.proteinCyclin-dependent kinase complexRecombinant DNAPhosphorylationResearch Paper010606 plant biology & botanyCyclin-dependent kinase inhibitor proteinJournal of Experimental Botany
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Genetic determinants of seed protein plasticity in response to the environment in Medicago truncatula

2021

As the frequency of extreme environmental events is expected to increase with climate change, identifying candidate genes for stabilizing the protein composition of legume seeds or optimizing this in a given environment is increasingly important. To elucidate the genetic determinants of seed protein plasticity, major seed proteins from 200 ecotypes of Medicago truncatula grown in four contrasting environments were quantified after one-dimensional electrophoresis. The plasticity index of these proteins was recorded for each genotype as the slope of Finlay and Wilkinson's regression and then used for genome-wide association studies (GWASs), enabling the identification of candidate genes for d…

0106 biological sciences0301 basic medicineCandidate geneGenotypelegumesMutantVitamin UGenome-wide association studyPlant ScienceBiologymethionine recycling01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health scienceschemistry.chemical_compoundMethionineStress PhysiologicalMedicago truncatulaGeneticsStorage protein[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyGenome-wide association studies (GWAS)GenePlant Proteins2. Zero hungerchemistry.chemical_classificationGeneticsMethionineSeed Storage Proteinsfood and beveragesGlobulinsCell Biologybiology.organism_classificationMedicago truncatulaMetabolic pathwayPhenotype030104 developmental biologychemistrystorage proteins13. Climate actionplasticityMutationSeedsseedGenome-Wide Association Study010606 plant biology & botany
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A Complex Gene Network Mediated by Ethylene Signal Transduction TFs Defines the Flower Induction and Differentiation in Olea europaea L.

2021

The olive tree (Olea europaea L.) is a typical Mediterranean crop, important for olive and oil production. The high tendency to bear fruits in an uneven manner, defined as irregular or alternate bearing, results in a significant economic impact for the high losses in olives and oil production. Buds from heavy loaded (‘ON’) and unloaded (‘OFF’) branches of a unique olive tree were collected in July and the next March to compare the transcriptomic profiles and get deep insight into the molecular mechanisms regulating floral induction and differentiation. A wide set of DEGs related to ethylene TFs and to hormonal, sugar, and phenylpropanoid pathways was identified in buds collected from ‘OFF’ …

0106 biological sciences0301 basic medicineCandidate genelcsh:QH426-470Flower differentiationFlowersBiology01 natural sciencesArticleTranscriptome03 medical and health sciencesalternate bearingGene Expression Regulation PlantFlower inductionOleaBotanyGeneticsGene Regulatory NetworksOlea europaeaGeneGenetics (clinical)Plant ProteinsfloweringPhenylpropanoidfood and beveragesCell Differentiationtranscriptome profilingEthylenesbiology.organism_classificationOlive treesPlant Breedinglcsh:Genetics030104 developmental biologylateral budOleaNGS<i>Olea europaea</i>Transcriptome010606 plant biology & botanyTranscription FactorsGenes
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Role of Bacillus thuringiensis Cry1A toxins domains in the binding to the ABCC2 receptor from Spodoptera exigua

2018

Abstract Cry proteins from Bacillus thuringiensis (Bt) have been used to control insect pests either as formulated sprays or as in Bt-crops. However, field-evolved resistance to Bt proteins is threatening the long-term use of Bt products. The SeABCC2 locus has been genetically linked to resistance to a Bt bioinsecticide (Xentari™) in Spodoptera exigua (a mutation producing a truncated form of the transporter lacking an ATP binding domain was found in the resistant insects). Here, we investigated the role of SeABCC2 in the mode of action of Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ca, and two Cry1A-1Ca hybrids by expressing the receptor in Sf21 and HEK293T cell lines. Cell toxicity assays showed that Sf2…

0106 biological sciences0301 basic medicineCell SurvivalBacillus thuringiensisGene ExpressionSpodopteraSpodopteraTransfection01 natural sciencesBiochemistryHemolysin ProteinsStructure-Activity Relationship03 medical and health sciencesBacterial ProteinsProtein DomainsBacillus thuringiensisExiguaSf9 CellsAnimalsHumansProtein IsoformsBinding siteReceptorMolecular BiologySf21Binding SitesBacillus thuringiensis Toxinsbiologyfungibiology.organism_classificationMultidrug Resistance-Associated Protein 2Recombinant ProteinsClone CellsEndotoxins010602 entomologyHEK293 Cells030104 developmental biologyBiochemistryCry1AcLarvaInsect ScienceMutationInsect ProteinsMultidrug Resistance-Associated ProteinsPlasmidsProtein BindingBinding domainInsect Biochemistry and Molecular Biology
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What is Vipp1 good for?

2018

While Vipp1 (also known as IM30) clearly is essential for proper biogenesis of thylakoid membranes in chloroplasts and cyanobacteria, the exact function of Vipp1/IM30 still remains unclear. The recent in vivo study of Gutu et al. now demonstrates that Vipp1/IM30 forms localized puncta specifically at highly curved membrane regions at the cell periphery. These Vipp1/IM30 puncta were found being highly dynamic under normal growth conditions, while it has recently been shown that they stably associate with membranes under high-light conditions. These observations, together with the observation that other Vipp1/IM30 homologous proteins also form puncta under stress conditions, indicate a protec…

0106 biological sciences0301 basic medicineCellBiologyPhotosynthesis01 natural sciencesMicrobiologyChloroplast03 medical and health sciences030104 developmental biologyMembranemedicine.anatomical_structureMembrane proteinThylakoidmedicineBiophysicsMolecular BiologyBiogenesis010606 plant biology & botanyPhotosystemMolecular Microbiology
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A non-venomous sPLA2 of a lepidopteran insect: Its physiological functions in development and immunity

2018

Eicosanoids are oxygenated C20 polyunsaturated fatty acids that mediate various physiological processes in insects. Eicosanoid biosynthesis begins with a C20 precursor, arachidonic acid (5,8,11,14-eicosatetraenoic acid: AA). AA is usually released from phospholipids at sn-2 position by catalytic activity of phospholipase A2 (PLA2). Although various PLA2s classified into 16 gene families (= Groups) are known in various biological systems, few PLA2s are known in insects. Only two PLA2s involved in intracellular calcium independent PLA2 (iPLA2) group have been identified in lepidopteran insects with well known eicosanoid physiology. This study reports the first secretory PLA2 (sPLA2) in lepido…

0106 biological sciences0301 basic medicineCellular immunitybiologyfungiImmunologySpodopterabiology.organism_classification01 natural sciences010602 entomology03 medical and health sciencesOpen reading framechemistry.chemical_compound030104 developmental biologyPhospholipase A2BiochemistrychemistryJuvenile hormoneExiguabiology.proteinlipids (amino acids peptides and proteins)Arachidonic acidPeptide sequenceDevelopmental BiologyDevelopmental &amp; Comparative Immunology
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How water-soluble chlorophyll protein extracts chlorophyll from membranes.

2020

Water-soluble chlorophyll proteins (WSCPs) found in Brassicaceae are non-photosynthetic proteins that bind only a small number of chlorophylls. Their biological function remains unclear, but recent data indicate that WSCPs are involved in stress response and pathogen defense as producers of reactive oxygen species and/or Chl-regulated protease inhibitors. For those functions, WSCP apoprotein supposedly binds Chl to become physiologically active or inactive, respectively. Thus, Chl-binding seems to be a pivotal step for the biological function of WSCP. WSCP can extract Chl from the thylakoid membrane but little is known about the mechanism of how Chl is sequestered from the membrane into the…

0106 biological sciences0301 basic medicineChlorophyllCircular dichroismHot Temperaturemedicine.medical_treatmentBiophysicsmacromolecular substances01 natural sciencesBiochemistryLepidiumThylakoids03 medical and health scienceschemistry.chemical_compoundpolycyclic compoundsmedicineBinding sitePlant Proteinschemistry.chemical_classificationReactive oxygen speciesProteasefood and beveragesMembrane ProteinsWaterCell BiologyAmino acid030104 developmental biologyMembraneBiochemistrychemistrySolubilityThylakoidChlorophyll010606 plant biology & botanyBiochimica et biophysica acta. Biomembranes
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