Search results for " Polymorphism"

showing 10 items of 1028 documents

Genomic processes underlying rapid adaptation of a natural Chironomus riparius population to unintendedly applied experimental selection pressures

2020

Evolve and Resquence (E&R) studies are a useful tool to study genomic processes during rapid adaptation, e.g., in the framework of adaptive responses to global climate change. We applied different thermal regimes to a natural Chironomus riparius (Diptera) population in an E&R framework to infer its evolutionary potential for rapid thermal adaptation. We exposed two replicates to three temperatures each (14°C, 20°C and 26°C) for more than two years, the experiment thus lasting 22, 44 or 65 generations, respectively. The two higher temperatures presented a priori moderate, respectively strong selection pressures. Life-cycle fitness tests revealed no appreciable adaptation to thermal regimes b…

0106 biological sciences0301 basic medicineMultifactorial InheritanceClimate ChangePopulationved/biology.organism_classification_rank.speciesSingle-nucleotide polymorphismBiologyPolymorphism Single Nucleotide010603 evolutionary biology01 natural sciencesChironomidae03 medical and health sciencesGene FrequencyGenetic variationGeneticsAnimalsSelection GeneticeducationGeneAllele frequencyEcology Evolution Behavior and SystematicsChironomus ripariusLife Cycle Stageseducation.field_of_studyved/biologySelection coefficientTemperatureGenomicsAdaptation PhysiologicalBiological EvolutionGenetics Population030104 developmental biologyEvolutionary biologyMolecular Ecology
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Not that clean: Aquaculture-mediated translocation of cleaner fish has led to hybridization on the northern edge of the species' range

2021

Translocation and introduction of non-native organisms can have major impacts on local populations and ecosystems. Nevertheless, translocations are common practices in agri- and aquaculture. Each year, millions of wild-caught wrasses are transported large distances to be used as cleaner fish for parasite control in marine salmon farms. Recently, it was documented that translocated cleaner fish are able to escape and reproduce with local wild populations. This is especially a challenge in Norway, which is the world's largest salmon producer. Here, a panel of 84 informative SNPs was developed to identify the presence of nonlocal corkwing wrasse (Symphodus melops) escapees and admixed individu…

0106 biological sciences0301 basic medicineRange (biology)EvolutionSpecies distributionContext (language use)VDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920::Akvakultur: 922parasitesCleaner fish010603 evolutionary biology01 natural sciences03 medical and health sciencesAquacultureLabridaesingle nucleotide polymorphismGeneticsQH359-425Ecology Evolution Behavior and SystematicsLocal adaptationhuman‐mediated gene flowbiologybusiness.industryEcologyOriginal Articlesgenetic hybridizationbiology.organism_classification030104 developmental biologyaquacultureWrasseOriginal ArticleGeneral Agricultural and Biological SciencesbusinessCorkwing wrasse
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Characterization of a β-glucosidase isolated from an alpeorujo strain of Candida adriatica

2017

ABSTRACTA β-glucosidase-producing strain, Candida adriatica CECT13142, was isolated from olive oil wastes (alpeorujo) and identified by PCR/restriction fragment length polymorphism of the rDNA internal transcribed spacer and sequence analysis of the D1/D2 region of the 26S rRNA gene techniques. The enzyme was purified by sequential chromatography on DEAE-cellulose and Sephadex G-100. The relative molecular mass of the enzyme was estimated to be 50 kDa by SDS-PAGE. The hydrolytic activity of the β-glucosidase had an optimum pH of 8.2 and an optimum temperature of 40°C. The enzyme displayed high substrate specificity and high catalytic efficiency (Km 0.85 mM, Vmax 12.5 U/g of cells) for p-nit…

0106 biological sciences0301 basic medicinechemistry.chemical_classificationMolecular massStrain (chemistry)Sequence analysisRibosomal RNABiology01 natural sciencesApplied Microbiology and Biotechnology03 medical and health sciences030104 developmental biologyEnzymeBiochemistrychemistrySephadex010608 biotechnologyInternal transcribed spacerRestriction fragment length polymorphismFood ScienceBiotechnologyFood Biotechnology
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Karyotype variability and inter-population genomic differences in freshwater ostracods (Crustacea) showing geographical parthenogenesis

2018

Transitions from sexual to asexual reproduction are often associated with polyploidy and increased chromosomal plasticity in asexuals. We investigated chromosomes in the freshwater ostracod species Eucypris virens (Jurine, 1820), where sexual, asexual and mixed populations can be found. Our initial karyotyping of multiple populations from Europe and North Africa, both sexual and asexual, revealed a striking variability in chromosome numbers. This would suggest that chromosomal changes are likely to be accelerated in asexuals because the constraints of meiosis are removed. Hence, we employed comparative genomic hybridization (CGH) within and among sexual and asexual populations to get insigh…

0106 biological sciences0301 basic medicinefreshwater ostracodslcsh:QH426-470PopulationDIVERSITYcomparative genomic hybridizationPOLYPLOIDYAsexual reproductionGRASSHOPPER EYPREPOCNEMIS-PLORANSchromosome numbersB-CHROMOSOME POLYMORPHISMBiologyASEXUAL REPRODUCTION010603 evolutionary biology01 natural sciencesArticleAsexuality03 medical and health sciencesNORTH-AFRICAACRIDIDAEGeneticsCopy-number variationeducationRibosomal DNAGenetics (clinical)education.field_of_studygeographical parthenogenesisBiology and Life SciencesParthenogenesisreproductive modesDNAfreshwater ostracods; asexuality; reproductive modes; geographical parthenogenesis; comparative genomic hybridization; chromosome numbers; karyotypekaryotypeORTHOPTERAlcsh:Genetics030104 developmental biologyEvolutionary biologyEarth and Environmental SciencesPHASMATODEAPloidyasexualityComparative genomic hybridization
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Genetic diversity of Rhizoctonia solani associated with potato tubers in France.

2011

Publication Inra prise en compte dans l'analyse bibliométrique des publications scientifiques mondiales sur les Fruits, les Légumes et la Pomme de terre. Période 2000-2012. http://prodinra.inra.fr/record/256699; International audience; The soilborne fungus Rhizoctonia solani is a pathogen of many plants and causes severe damage in crops around the world. Strains of R. solani from the anastomosis group (AG) 3 attack potatoes, leading to great yield losses and to the downgrading of production. The study of the genetic diversity of the strains of R. solani in France allows the structure of the populations to be determined and adapted control strategies against this pathogen to be established. …

0106 biological sciences0301 basic medicineinternal transcribed spacer polymorphic sitePhysiologyMolecular Sequence Dataanastomosis groupBiology010603 evolutionary biology01 natural sciencesamplified fragment length polymorphismRhizoctoniaRhizoctonia solani03 medical and health sciencesGenetic variationBotanyDNA Ribosomal SpacerGeneticsInternal transcribed spacerAmplified Fragment Length Polymorphism AnalysisMolecular BiologyEcology Evolution Behavior and Systematics[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/MycologyPhylogenySolanum tuberosum2. Zero hungerGeneticsGenetic diversityPhylogenetic treeBase SequenceRhizoctonia solanifood and beveragesGenetic VariationCell BiologyGeneral Medicine030108 mycology & parasitologyRibosomal RNAbiology.organism_classificationelongation factorDNA profilingpotatoAmplified fragment length polymorphismFranceanastamoseMycologia
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Spreading introgression in the wake of a moving contact zone

2006

An increasing number of studies describe moving hybrid zones. This raises the issue of their actual frequency and emphasizes the need for methods that enable the detection of zone movements without historical records. Asymmetric introgression, usually considered as a signature of geographical shift, might be misleading when applied to mitochondrial or potentially non-neutral markers. We investigated mitochondrial and genomic introgression, using 30 AFLP derived markers, in a well-documented moving avian contact zone between two warblers. We found no instances of cross-species transmission of mitochondrial DNA but we detected nuclear introgression. Introgression levels were higher in the exp…

0106 biological sciences0303 health sciencesMitochondrial DNAEcologyAllopatric speciationIntrogressionBiology010603 evolutionary biology01 natural sciences03 medical and health sciencesSympatric speciationEvolutionary biologyGeneticsRarefaction (ecology)Contact zoneAmplified fragment length polymorphismEcology Evolution Behavior and SystematicsHistorical record030304 developmental biologyMolecular Ecology
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Do colour morphs of wall lizards express different personalities?

2021

Abstract Colour morphs sometimes have different behavioural strategies which may be maintained by frequency or density dependence mechanisms. We investigated temporal changes in behavioural reaction to a novel environment among colour morphs (yellow, orange, white) of the European wall lizard (Podarcis muralis). Adult males were given two 15 min experimental trials, and their locomotion was highly consistent between the two trials. Boldness, freezing and escape behaviour were less repeatable. Colour morphs differed in their locomotion and freezing behaviour. Boldness was similar among the morphs, whereas escape behaviour was lowest in yellow morph. Consequently, yellow morph males tended to…

0106 biological sciences0303 health sciencesgenetic structuresfungiselectionBiology010603 evolutionary biology01 natural sciencesbehaviourbody regionslocomotion03 medical and health sciencesEvolutionary biologypersonalitycolour polymorphismPodarcis muralislizardpsychological phenomena and processesEcology Evolution Behavior and Systematics030304 developmental biologyBiological Journal of the Linnean Society
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50,000 years of ice and seals: Impacts of the Last Glacial Maximum on Antarctic fur seals

2021

Abstract Ice is one of the most important drivers of population dynamics in polar organisms, influencing the locations, sizes, and connectivity of populations. Antarctic fur seals, Arctocephalus gazella, are particularly interesting in this regard, as they are concomitantly reliant on both ice‐associated prey and ice‐free coastal breeding areas. We reconstructed the history of this species through the Last Glacial Maximum (LGM) using genomic sequence data from seals across their range. Population size trends and divergence events were investigated using continuous‐time size estimation analysis and divergence time estimation models. The combined results indicated that a panmictic population …

0106 biological sciences570Demographic historyRange (biology)Population590010603 evolutionary biology01 natural sciences03 medical and health sciencessingle nucleotide polymorphismsPeninsulaVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 47014. Life underwaterglacial refugiaeducationEcology Evolution Behavior and SystematicsQH540-549.5030304 developmental biologyNature and Landscape ConservationOriginal Research0303 health sciencesPanmixiaeducation.field_of_studygeography.geographical_feature_categorybiologyEcologyPopulation sizeArctocephalus gazellaLast Glacial Maximumbiology.organism_classificationdemographic historyGeographyPhysical geographyArctocephalus gazella
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Effects of predation pressure and resource use on morphological divergence in omnivorous prey fish

2013

Background. Body shape is one of the most variable traits of organisms and responds to a broad array of local selective forces. In freshwater fish, divergent body shapes within single species have been repeatedly observed along the littoral-pelagic axes of lakes, where the structural complexity of near shore habitats provides a more diverse set of resources compared to the open-water zones. It remains poorly understood whether similar resource-driven polymorphism occurs among lakes that vary in structural complexity and predation pressure, and whether this variation is heritable. Here, we analyzed body shape in four populations of omnivorous roach (Rutilus rutilus) inhabiting shallow lakes.…

0106 biological sciencesAFLPStable isotope analysisGenotypeOutlier lociCyprinidaePredationZoology010603 evolutionary biology01 natural sciencesPredation03 medical and health sciencesAdaptive divergencemorfologiaGenetic driftvakaat isotoopitparasitic diseasesAnimals14. Life underwatersärkiAmplified Fragment Length Polymorphism AnalysisEcosystemEcology Evolution Behavior and Systematics030304 developmental biologyIsolation by distance0303 health sciencesGeometric morphometricsbiologyEcologyGenetic DriftShallow lakesbiology.organism_classificationBiological EvolutionGut content analysis6. Clean watersaalistusLakesPhenotypematalat järvetHabitatPredatory BehaviorPredator induced morphological defenseForage fishFreshwater fishpredaatioRutilus rutilusOmnivoreRutilusResearch ArticleBMC Evolutionary Biology
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Insect Vectors (Hemiptera: Cixiidae) and Pathogens Associated with the Disease Syndrome “Basses Richesses” of Sugar Beet in France

2019

International audience; The syndrome “basses richesses” (SBR) is a disease of sugar beet in eastern France associated with two phloem-restricted, nonculturable plant pathogens: a stolbur phytoplasma and a γ-3 proteobacterium, here called SBR bacterium. Three planthopper (Hemiptera: Cixiidae) species were found to live near and within sugar beet fields in eastern France: Cixius wagneri, Hyalesthes obsoletus, and Pentastiridius leporinus. The role of these planthoppers in spreading the two pathogens to sugar beet was studied. Based on its abundance and high frequency of infection with the SBR bacterium, P. leporinus was considered to be the economic vector of SBR disease. C. wagneri, the prim…

0106 biological sciencesBASSES RICHESSES SYNDROME OF SUGAR BEETHomopteraEXPERIMENTAL TRANSMISSIONCIXIIDAEPlant Science01 natural sciencesHEMIPTERADETECTION03 medical and health sciencesPlanthopperBotanySugarPOLYMERASE CHAIN REACTION RESTRICTED FRAGMENT LENGH POLYMORPHISM030304 developmental biology2. Zero hunger0303 health sciencesbiologyPHLOEM LIMITED BACTERIAfungifood and beveragesLeporinusbiology.organism_classificationCixiidae[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyHYALESTHES OBSOLETUSINSECTEGAMMA-3-PROTEOBACTERIAPhytoplasmaSTOLBUR PHYTOPLASMAVECTORSSugar beetCIXIUS WAGNERICHARACTERIZATIONAgronomy and Crop ScienceConvolvulusPENTASTIRIDIUS LEPORINUS010606 plant biology & botany
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