Search results for " Principal Component Analysis"
showing 10 items of 71 documents
Agronomic, metabolomic and lipidomic characterization of Sicilian Origanum vulgare (L.) ecotypes
2016
Although Origanum vulgare (L.) has been deeply analysed at phytochemical level, poor knowledge is available regarding non-volatile compounds such as lipids. The aim of this work was to characterise five wild Sicilian Origanum ecotypes from an agronomic, metabolomic and lipidomic perspective. Serradifalco presented higher dry weight and inflorescences/plant than the others while Favara had a significantly higher number of branches per plant and more extensive flowered stratum. Metabolomic analysis, performed with LC-MS-TOF, allowed a preliminary characterisation of the non-volatile metabolome of the five oregano ecotypes Origanum vulgare ssp. hirtum. Twenty-five metabolites were identified b…
Metabolic signatures across the full spectrum of non-alcoholic fatty liver disease.
2022
Funder: European Commission
On application of kernel PCA for generating stimulus features for fMRI during continuous music listening
2017
Abstract Background There has been growing interest towards naturalistic neuroimaging experiments, which deepen our understanding of how human brain processes and integrates incoming streams of multifaceted sensory information, as commonly occurs in real world. Music is a good example of such complex continuous phenomenon. In a few recent fMRI studies examining neural correlates of music in continuous listening settings, multiple perceptual attributes of music stimulus were represented by a set of high-level features, produced as the linear combination of the acoustic descriptors computationally extracted from the stimulus audio. New method fMRI data from naturalistic music listening experi…
Factors Related to Women’s Psychological Distress during the COVID-19 Pandemic: Evidence from a Two-Wave Longitudinal Study
2021
Background. A growing body of research has highlighted the negative effects of the COVID-19 pandemic on women’s mental health. Previous studies showed that women have higher levels of depression, anxiety and PTSD, and worse psychological adjustment than men, which also persisted after the earlier phase of the pandemic. This study aimed to evaluate changes in women’s psychological distress during the pandemic and to evaluate the factors that have a more significant impact in predicting women’s psychological distress. Methods. This two-wave longitudinal study (T1 = Italian first lockdown, and T2 = second phase, when the restrictive measures were eased) involved 893 women (Mage = 36.45, SD = 1…
Air quality assessment via functional principal component analysis
2009
The knowledge of the global urban air quality situation represents the first step to face air pollution issues. For the last decades many urban areas can rely on a monitoring network, recording hourly data for the main pollutants. Such data need to be aggregated according to different dimensions, such as time, space and type of pollutant, in order to provide a synthetic air quality index which takes into account interactions among pollutants and correlation among monitoring sites.This paper focuses on Functional Principal Component techniques for the statistical analysis of a set of environmental data x(spt), where s stands for the monitoring site, p for the pollutant and t for time, usuall…
Detection of homogeneous precipitation regions at seasonal and annual time scales, northwest Iran
2017
Abstract Detection of homogeneous climate areas is a challenging issue, which can be affected by different criteria. One of the most prominent factors is choosing the time scale, which can lead to different spatial and temporal patterns. Total precipitation is a key factor in climatological studies, and studying its distribution is of utmost importance. The combination of principal components analysis and cluster analysis is used for homogeneous precipitation areas' detection. Hence, the spatial pattern of total precipitation was investigated in northwestern Iran during the past two decades (1991–2010) on seasonal and annual time scales. The results of clustering on each time scale were val…
Trends of mean temperatures and warm extremes in northern tropical Africa (1961-2014) from observed and PPCA-reconstructed time series
2016
Trends in daily maximum (TX) and minimum (TN) temperatures and indices of warm extremes are studied in tropical North Africa, west of the eastern African highlands, from 1961 to 2014. The analysis is based on the concatenation and cross-checking of two observed databases. Due to the large number of missing entries (~25%), a statistical infilling using probabilistic principal component analysis was applied. Averaged over 90 stations, the linear trends of annual mean TX and TN equal respectively +0.021 °C/yr and +0.028 °C/yr. The frequency of very hot days (TX > 35°C) and tropical nights (TN > 20°C), as well as the frequency of daily TX and TN above the 90th percentile (p90) (“warm days” and …
Estimation of total electricity consumption curves of small areas by sampling in a finite population
2016
International audience; Many studies carried out in the French electricity company EDF are based on the analysis of the total electricity consumption curves of groups of customers. These aggregated electricity consumption curves are estimated by using samples of thousands of curves measured at a small time step and collected according to a sampling design. Small area estimation is very usual in survey sampling. It is often addressed by using implicit or explicit domain models between the interest variable and the auxiliary variables. The goal here is to estimate totals of electricity consumption curves over domains or areas. Three approaches are compared: the rst one consists in modeling th…
Reproducing kernel hilbert spaces regression methods for genomic assisted prediction of quantitative traits.
2008
Abstract Reproducing kernel Hilbert spaces regression procedures for prediction of total genetic value for quantitative traits, which make use of phenotypic and genomic data simultaneously, are discussed from a theoretical perspective. It is argued that a nonparametric treatment may be needed for capturing the multiple and complex interactions potentially arising in whole-genome models, i.e., those based on thousands of single-nucleotide polymorphism (SNP) markers. After a review of reproducing kernel Hilbert spaces regression, it is shown that the statistical specification admits a standard mixed-effects linear model representation, with smoothing parameters treated as variance components.…