Search results for " RNA"

showing 10 items of 1405 documents

Dexamethasone modulates α2-macroglobulin and apolipoprotein E gene expression in cultured rat liver fat-storing (Ito) cells

1991

Fat-storing (Ito) cells are perisinusoidal liver cells thought to play a central role in vitamin A metabolism and fibrogenesis. Glucocorticoids have been shown to be beneficial in the treatment of certain types of liver diseases by delaying the development of cirrhosis. To study the regulatory effects of dexamethasone on Ito cell gene expression, Ito cells were isolated from normal rat liver and primary cultures were established. The effect of dexamethasone on the synthesis of α2-macroglobulin, apolipoprotein E, fibronectin and actin was examined. Protein synthesis was studied both at the protein level and at the RNA level by means of biosynthetic labeling, immunoprecipitation followed by s…

Apolipoprotein Emedicine.medical_specialtyApolipoprotein BGene ExpressionDexamethasoneApolipoproteins EInternal medicineGene expressionmedicineProtein biosynthesisAnimalsalpha-MacroglobulinsRNA MessengerNorthern blotCells CulturedMessenger RNAEstradiolHepatologybiologyLipid MetabolismActinsFibronectinsRatsEndocrinologyLiverCell culturebiology.proteinHepatic stellate cellHepatology
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Nyctiphanes couchii as intermediate host for Rhadinorhynchus sp. (Acanthocephala, Echinorhynchidae) from NW Iberian Peninsula waters

2013

12 páginas, 3 figuras, 3 tablas

Aquatic ScienceBiologyZooplanktonAcanthocephalan18S ribosomal RNAZooplanktonAcanthocephalaHost-Parasite InteractionsProboscis (genus)CystacanthsAnimalsNE AtlanticCladeAtlantic OceanPhylogenyEcology Evolution Behavior and SystematicsPhylogenetic treeEcologyIntermediate hostNyctiphanes couchiiDNAbiology.organism_classificationEuphausiidRhadinorhynchus sp.SpainUpwellingAcanthocephalaEuphausiacea
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Anaplastic Thyroid Carcinoma: A ceRNA Analysis Pointed to a Crosstalk between SOX2, TP53, and microRNA Biogenesis.

2014

It has been suggested that cancer stem cells (CSC) may play a central role in oncogenesis, especially in undifferentiated tumours. Anaplastic thyroid carcinoma (ATC) has characteristics suggestive of a tumour enriched in CSC. Previous studies suggested that the stem cell factorSOX2has a preeminent hierarchical role in determining the characteristics of stem cells in SW1736 ATC cell line. In detail, silencing SOX2 in SW1736 is able to suppress the expression of the stem markers analysed, strongly sensitizing the line to treatment with chemotherapeutic agents. Therefore, in order to further investigate the role of SOX2 in ATC, a competing endogenous RNA (ceRNA) analysis was conducted in order…

Article SubjectEndocrinology Diabetes and MetabolismSOX2Stem cell factorAnaplastic Thyroid carcinomaBiologyBioinformaticsmedicine.disease_causelcsh:Diseases of the endocrine glands. Clinical endocrinologySettore MED/13 - EndocrinologiaEndocrinologySOX2Cancer stem cellmicroRNAmedicineGene silencinglcsh:RC648-665microRNAEndocrine and Autonomic SystemsCompeting endogenous RNAceRNACancer researchStem cellCarcinogenesisResearch ArticleInternational journal of endocrinology
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Ultradeep Sequencing Analysis of Population Dynamics of Virus Escape Mutants in RNAi-Mediated Resistant Plants

2012

Plant artificial micro-RNAs (amiRs) have been engineered to target viral genomes and induce their degradation. However, the exceptional evolutionary plasticity of RNA viruses threatens the durability of the resistance conferred by these amiRs. It has recently been shown that viral populations not experiencing strong selective pressure from an antiviral amiR may already contain enough genetic variability in the target sequence to escape plant resistance in an almost deterministic manner. Furthermore, it has also been shown that viral populations exposed to subinhibitory concentrations of the antiviral amiR speed up this process. In this article, we have characterized the molecular evolutiona…

Artificial micro-RNAsPopulation genetics[SDV]Life Sciences [q-bio]Population DynamicsPotyvirusStatistics as TopicPopulationMutantArabidopsisReplicationMirnasBiologyType-1VirusEvolution Molecular03 medical and health sciencesRNA interferenceInterfering rnasGeneticsSirnaseducationMolecular BiologyPhylogenyResearch ArticlesEcology Evolution Behavior and SystematicsPlant Diseases030304 developmental biologyInfluenza-VirusInhibitionGenetics0303 health scienceseducation.field_of_studyArtificial micrornasResistant plantsNucleotides030302 biochemistry & molecular biologyGenetic VariationHigh-Throughput Nucleotide SequencingSequence Analysis DNAVirologyVirus evolution3. Good healthMicroRNAsExperimental evolutionMutationNext-generation sequencingRNA InterferenceTranscription
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A bi-allelic loss-of-function SARS1 variant in children with neurodevelopmental delay, deafness, cardiomyopathy, and decompensation during fever

2021

Aminoacyl-tRNA synthetases (aaRS) are ubiquitously expressed enzymes responsible for ligating amino acids to their cognate tRNA molecules through an aminoacylation reaction. The resulting aminoacyl-tRNA is delivered to ribosome elongation factors to participate in protein synthesis. Seryl-tRNA synthetase (SARS1) is one of the cytosolic aaRSs and catalyzes serine attachment to tRNASer . SARS1 deficiency has already been associated with moderate intellectual disability, ataxia, muscle weakness, and seizure in one family. We describe here a new clinical presentation including developmental delay, central deafness, cardiomyopathy, and metabolic decompensation during fever leading to death, in a…

AtaxiabrainCardiomyopathySARS1Loss of HeterozygosityBiologyAmino Acyl-tRNA Synthetaseschemistry.chemical_compounddeafnessdeathGeneticsmedicineProtein biosynthesisMissense mutationHumansDecompensationaminoacyl-tRNA synthetaseChildtRNAGenetics (clinical)GeneticsaminoacylationAminoacyl tRNA synthetasemedicine.diseaseElongation factorchemistryintellectual disabilityTransfer RNAmedicine.symptomCardiomyopathiesHuman mutation
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Different muscarinic receptor subtypes modulate proliferation of primary human detrusor smooth muscle cells via Akt/PI3K and map kinases.

2013

While acetylcholine (ACh) and muscarinic receptors in the bladder are mainly known for their role in the regulation of smooth muscle contractility, in other tissues they are involved in tissue remodelling and promote cell growth and proliferation. In the present study we have used primary cultures of human detrusor smooth muscle cells (HDSMCs), in order to investigate the role of muscarinic receptors in HDSMC proliferation. Samples were obtained as discarded tissue from men >65 years undergoing radical cystectomy for bladder cancer and cut in pieces that were either immediately frozen or placed in culture medium for the cell culture establishment. HDSMCs were isolated from samples, propagat…

AtropineMalePyrrolidinesMessenger030232 urology & nephrologyGene ExpressionPhosphatidylinositol 3-Kinases0302 clinical medicineAged Atropine; pharmacology Benzofurans; pharmacology Carbachol; pharmacology Cell Proliferation Cells; Cultured Cholinergic Agonists; pharmacology Gene Expression Humans Male Mitogen-Activated Protein Kinases; metabolism Muscarinic Antagonists; pharmacology Myocytes; Smooth Muscle; metabolism Phosphatidylinositol 3-Kinases; metabolism Piperidines; pharmacology Pirenzepine; analogs /&/ derivatives/pharmacology Proto-Oncogene Proteins c-akt; metabolism Pyrrolidines; pharmacology RNA; Messenger; metabolism Receptors; Muscarinic; physiology Urinary Bladder; cytologyPiperidinesSmooth MuscleReceptorsMuscarinic acetylcholine receptor M5Muscarinic acetylcholine receptorCells CulturedCulturedMuscarinic acetylcholine receptor M3Muscarinic acetylcholine receptor M2Smooth muscle contractionMuscarinic acetylcholine receptor M1Receptors Muscarinic030220 oncology & carcinogenesisMitogen-Activated Protein KinasesAcetylcholinemedicine.drugmedicine.medical_specialtyCarbacholCellsMyocytes Smooth MuscleUrinary BladderMuscarinic AntagonistsBiologyCholinergic Agonists03 medical and health sciencesInternal medicineMuscarinicmedicineHumansRNA MessengerAgedBenzofuransCell ProliferationPharmacologyMyocytesPirenzepineEndocrinologyphysiologycytologyRNACarbacholanalogs /&/ derivatives/pharmacologymetabolismProto-Oncogene Proteins c-aktPharmacological research
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Multiple-chromosome sex systems in the darkling beetles Blaps gigas and Blaps gibba (Coleoptera, Tenebrionidae)

1996

We have studied mitotic and meiotic chromosomes in the males of two species of Blaps: B. gigas and B. gibba. Karyological characteristics such as the occurrence of a multivalent configuration at diakinesis and two types of metaphase-II spreads support the notion that multiple-chromosome sex systems involving five chromosomes in B. gigas and eight chromosomes in B. gibba have developed in these species. Results obtained by means of silver staining and C-banding techniques suggest that the complex sex systems occurring in B. gigas and B. gibba may have originated from exchanges of terminal ribosomal genes among the Y chromosome and some autosomes.

AutosomeChromosomeKaryotypePlant ScienceGeneral MedicineBiologyRibosomal RNAY chromosomeMeiosisInsect ScienceBotanyGeneticsAnimal Science and ZoologyGeneMitosisGenetica
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The size of aryl linker between two polyaza-cyclophane moieties controls the binding selectivity to ds-RNA vs ds-DNA

2013

Aryl-linked (pyridine- vs. phenanthroline-) bis-polyaza pyridinophane scorpiands PYPOD and PHENPOD strongly bind to the double stranded DNA and RNA, whereby very intriguing RNA over DNA selectivity is finely tuned by aryl-linker length and aromatic surface. Moreover, PYPOD and PHENPOD dimer formation at high compound/polynucleotide ratios is highly sensitive to the fine interplay between the steric and binding properties of compound-dimers and the DNA minor groove/RNA major groove. That is demonstrated by significantly different induced CD spectra, which allow spectroscopic differentiation between various DNA/RNA secondary structures. A significantly higher (micromolar) antiproliferative ef…

Aza CompoundsBinding SitesMolecular StructureStereochemistryChemistryPyridinesDimerOrganic ChemistryRNADNABiochemistrypolyaza-cyclophane ; DNA ; RNA ; selectivity ; antiproliferative activitychemistry.chemical_compoundPolynucleotidePhysical and Theoretical ChemistryBinding siteParticle SizeLinkerBinding selectivityDNACyclophanePhenanthrolinesRNA Double-Stranded
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Vibrio agarivorans sp. nov., a novel agarolytic marine bacterium.

2002

It is proposed that the new Vibrio species Vibrio agarivorans accommodates two agarolytic, halophilic, fermentative bacterial strains isolated from Mediterranean sea water. The cells were gram-negative, oxidase-positive, polarly flagellated bacilli that fermented glucose without gas production and that produced no decarboxylases. They used a wide range of compounds as sole carbon and energy sources. The DNA G+C content was 44.8 mol%. Phylogenetic analysis based on complete 16S and 23S rDNA sequences revealed that the strains belong to the gamma-Proteobacteria, and are specifically related to Vibrio species. Their nearest relatives were species of the Vibrio fischeri group, sharing 16S rDNA …

BacilliSequence analysisMolecular Sequence DataGeneral MedicineSequence Analysis DNABiology16S ribosomal RNAbiology.organism_classificationMicrobiologyDNA RibosomalVibrioHalophileMicrobiologyAgarRNA Ribosomal 23SBiochemistryVibrionaceaeRNA Ribosomal 16SMediterranean SeaSeawaterEnergy sourceEcology Evolution Behavior and SystematicsBacteriaPhylogenyVibrioInternational journal of systematic and evolutionary microbiology
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Stimulated and unstimulated saliva samples have significantly different bacterial profiles

2018

Epidemiological studies use saliva on a regular basis as a non-invasive and easy-to-take sample, which is assumed to be a microbial representative of the oral cavity ecosystem. However, comparative studies between different kinds of saliva samples normally used in microbial studies are scarce. The aim of the current study was to compare oral microbiota composition between two different saliva samples collected simultaneously: non-stimulated saliva with paper points and stimulated saliva collected after chewing paraffin gum. DNA was extracted from saliva samples of ten individuals, then analyzed by 16S rRNA pyrosequencing to describe bacterial diversity. The results demonstrate significant d…

Bacterial DiseasesMale0301 basic medicineSalivaPhysiologylcsh:MedicineMicrobiologiaPathology and Laboratory MedicineOral cavityDatabase and Informatics Methodsfluids and secretions0302 clinical medicineOral DiseasesCariesMedicine and Health SciencesFood sciencelcsh:ScienceChildMultidisciplinaryGenomicsBody FluidsBacterial PathogensInfectious Diseasesmedicine.anatomical_structureMedical MicrobiologyParaffinFemaleAnatomyPathogensSequence AnalysisResearch ArticleAdolescentBioinformaticsOral MedicineSequence DatabasesMicrobial GenomicsBiologyResearch and Analysis MethodsDental plaqueMicrobiologyBuccal mucosa03 medical and health sciencesOral Microbiotastomatognathic systemTongueGeneticsmedicineHumansEpidemiologiaSalivaMicrobial PathogensBacteriaBocalcsh:ROrganismsBiology and Life SciencesStreptococcus030206 dentistrymedicine.disease16S ribosomal RNAstomatognathic diseasesBiological Databases030104 developmental biologyEstomatologiaPyrosequencinglcsh:QMicrobiomePLOS ONE
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