Search results for " Root"

showing 10 items of 627 documents

Gaining Insight into Exclusive and Common Transcriptomic Features Linked to Drought and Salinity Responses across Fruit Tree Crops

2020

The present study aimed at identifying and mapping key genes expressed in root tissues involved in drought and salinity tolerance/resistance conserved among different fruit tree species. Twenty-six RNA-Seq samples were analyzed from six published studies in five plant species (Olea europaea, Vitis riparia Michx, Prunus mahaleb, Prunus persica, Phoenix dactylifera). This meta-analysis used a bioinformatic pipeline identifying 750 genes that were commonly modulated in three salinity studies and 683 genes that were commonly regulated among three drought studies, implying their conserved role in resistance/tolerance/response to these environmental stresses. A comparison was done on the genes th…

0106 biological sciences0301 basic medicinerootsdifferentially expressed genesabiotic stresses differentially expressed genes fruit crops meta-analysis RNA-seq roots transcriptomicsPlant ScienceBiologyQuantitative trait locus01 natural sciencesArticle03 medical and health scienceschemistry.chemical_compoundtranscriptomicsAuxinSettore AGR/07 - Genetica AgrariaBotanyDrug transmembrane transportGeneAbscisic acidEcology Evolution Behavior and Systematicschemistry.chemical_classificationEcologyAbiotic stressBotanyfood and beveragesfruit cropsabiotic stressesSalinitySettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboreemeta-analysis030104 developmental biologychemistryQK1-989RNA-seqFruit tree010606 plant biology & botanyPlants
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Ornacitrus: Citrus plants (Citrus spp.) as ornamentals

2019

Abstract The industrial production of citrus plants for ornamental use (ornacitrus) began in Italy at the end of the 1960s due to the need for many citrus nurseries to adapt their activities in a time of crisis for citriculture. Nowadays, the ornamental citrus nursery sector is a well-established industry in many European countries such as Portugal, Spain, Greece, and southern Italy. In Italy, nursery production of ornamental citrus plants has become prominent due to the gradual shutdown of many commercial citrus orchards. Currently, Italy maintains its leadership with more than 5.5 million ornacitrus plants produced annually. Ornamental citrus production regards mainly different cultivars …

0106 biological sciencesAgroforestryIndustrial productionnursery managementPlant culture04 agricultural and veterinary sciencesHorticulturerootstocks01 natural sciencescitrus spp.SB1-1110Citrus spp. nursery management potted ornamental plants rootstocks varietySettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreevarietyGeographyOrnamental plantCultivarpotted ornamental plants0405 other agricultural sciencesStrengths and weaknesses010606 plant biology & botany040502 food scienceFolia Horticulturae
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Soil legacy determines arbuscular mycorrhizal spore bank and plant performance in the low Arctic

2020

AbstractHuman impact is rapidly changing vegetation globally. The effect of plant cover that no longer exists in a site may still affect the development of future vegetation. We focused on a little studied factor—arbuscular mycorrhizal (AM) fungus spore bank—and its effect on three test plant species. In a low Arctic field site, plots were maintained for 6 years, devoid of any vegetation or with a Solidago virgaurea monoculture cover. We analysed the AM fungal morphospecies composition and identified 21 morphospecies in the field plots. The AM morphospecies community was dominated by members of Acaulosporaceae. Monoculturing under low Arctic field conditions changed the soil AM spore commun…

0106 biological sciencesAnthoxanthum odoratumAcaulosporaceaePlant ScienceAM spore bankBiologyPlant Roots01 natural sciencesPotentilla crantziiSolidago virgaureaSoil03 medical and health sciencesAcaulosporaceaeMycorrhizaeBotanymykorritsasienetGeneticsHumansmykorritsaMolecular BiologySoil MicrobiologyEcology Evolution Behavior and Systematicsitiöt030304 developmental biologyarktinen aluemaaperä0303 health sciencesArctic RegionsfungiGeneral MedicineVegetationbiology.organism_classificationSolidagoSporeSolidago virgaureaPlant coverOriginal ArticlemonoculturingasterikasvitMonoculturingMonoculture010606 plant biology & botanyMycorrhiza
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Cytosolic pH regulates root water transport during anoxic stress through gating of aquaporins.

2003

Flooding of soils results in acute oxygen deprivation (anoxia) of plant roots during winter in temperate latitudes, or after irrigation1, and is a major problem for agriculture. One early response of plants to anoxia and other environmental stresses is downregulation of water uptake due to inhibition of the water permeability (hydraulic conductivity) of roots (Lpr)2,3,4,5. Root water uptake is mediated largely by water channel proteins (aquaporins) of the plasma membrane intrinsic protein (PIP) subgroup6,7,8. These aquaporins may mediate stress-induced inhibition of Lpr2,4,9 but the mechanisms involved are unknown. Here we delineate the whole-root and cell bases for inhibition of water upta…

0106 biological sciencesCell signalingMagnetic Resonance SpectroscopyCell RespirationArabidopsisAquaporin[SDV.BC]Life Sciences [q-bio]/Cellular BiologyGatingBiologyAquaporins01 natural sciencesPlant RootsPermeability03 medical and health sciencesXenopus laevisCytosolAnimalsComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant Diseases0303 health sciencesMultidisciplinaryWater transportMajor intrinsic proteinsWaterBiological TransportHydrogen-Ion Concentration6. Clean waterOxygenCytosolBiochemistryBiophysicsOocytesMembrane channelSignal transductionProtonsABSORPTION HYDRIQUEIon Channel Gating010606 plant biology & botanyNature
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Stimulation of Defense Reactions in Medicago truncatula by Antagonistic Lipopeptides from Paenibacillus sp. Strain B2

2010

ABSTRACT With the aim of obtaining new strategies to control plant diseases, we investigated the ability of antagonistic lipopolypeptides (paenimyxin) from Paenibacillus sp. strain B2 to elicit hydrogen peroxide (H 2 O 2 ) production and several defense-related genes in the model legume Medicago truncatula . For this purpose, M. truncatula cell suspensions were used and a pathosystem between M. truncatula and Fusarium acuminatum was established. In M. truncatula cell cultures, the induction of H 2 O 2 reached a maximum 20 min after elicitation with paenimyxin, whereas concentrations higher than 20 μM inhibited H 2 O 2 induction and this was correlated with a lethal effect. In plant roots in…

0106 biological sciencesChalcone synthaseCell Culture TechniquesPhenylalanine ammonia-lyase01 natural sciencesApplied Microbiology and BiotechnologyPlant RootsMicrobiologyCell wall03 medical and health sciencesPathosystemPaenibacillusLipopeptidesPlant MicrobiologyFusariumGene Expression Regulation Plant030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesEcologybiologyfungiPANIBACILLUS SP. STRAIN B2food and beveragesHydrogen Peroxidebiology.organism_classificationMedicago truncatulaCoculture TechniquesInvertaseChitinasebiology.proteinMEDICAGO TRUNCATULAPaenibacillus010606 plant biology & botanyFood ScienceBiotechnology
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Iron acquisition from Fe-pyoverdine by Arabidopsis thaliana.

2007

Taking into account the strong iron competition in the rhizosphere and the high affinity of pyoverdines for Fe(III), these molecules are expected to interfere with the iron nutrition of plants, as they do with rhizospheric microbes. The impact of Fe-pyoverdine on iron content of Arabidopsis thaliana was compared with that of Fe-EDTA. Iron chelated to pyoverdine was incorporated in a more efficient way than when chelated to EDTA, leading to increased plant growth of the wild type. A transgenic line of A. thaliana overexpressing ferritin showed a higher iron content than the wild type when supplemented with Fe-EDTA but a lower iron content when supplemented with Fe-pyoverdine despite its inc…

0106 biological sciencesChlorophyll[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyFMN ReductasePhysiologyIronArabidopsisReductasePseudomonas fluorescens01 natural sciencesPlant Roots03 medical and health scienceschemistry.chemical_compoundFMN reductaseArabidopsis thaliana[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyChelationRELATION PLANTE-MICROORGANISMECation Transport ProteinsEdetic Acid030304 developmental biology0303 health sciencesPyoverdinebiologyArabidopsis ProteinsACLWild typeARABIDOPSIS THALIANAGeneral Medicinebiology.organism_classificationPlants Genetically ModifiedFerritinchemistryBiochemistryChlorophyllFerritinsbiology.proteinAgronomy and Crop ScienceOligopeptides010606 plant biology & botany
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Arginase induction represses gall development during clubroot infection in Arabidopsis.

2012

Arginase induction can play a defensive role through the reduction of arginine availability for phytophageous insects. Arginase activity is also induced during gall growth caused by Plasmodiophora brassicae infection in roots of Arabidopsis thaliana; however, its possible role in this context has been unclear. We report here that the mutation of the arginase-encoding gene ARGAH2 abrogates clubroot-induced arginase activity and results in enhanced gall size in infected roots, suggesting that arginase plays a defensive role. Induction of arginase activity in infected roots was impaired in the jar1 mutant, highlighting a link between the arginase response to clubroot and jasmonate signaling. C…

0106 biological sciencesClubrootArabidopsis thalianaPhysiologyPyridinesArabidopsisplantPlant SciencePlasmodiophorida01 natural sciencesPlant RootsCallogenesisPlant Epidermischemistry.chemical_compoundJasmonateArabidopsisPlant TumorsGallArabidopsis thalianaJasmonateAmino AcidsComputingMilieux_MISCELLANEOUSchemistry.chemical_classification0303 health sciencesJasmonic acidfood and beveragesGeneral MedicineCell biologyArginasePLANT SCIENCESOrgan SpecificityPlasmodiophora brassicaeEnzyme Inductionnitric-oxideCyclopentanesBiologyHydroxylationAmidohydrolasesClubroot03 medical and health sciencesAuxinBotanymedicinethalianaOxylipinsIsoleucine030304 developmental biologydiseaseArginaseArabidopsis Proteinsfungijasmonic acid[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyplasmodiophora-brassicaeCell BiologyDiazonium Compoundsbiology.organism_classificationmedicine.diseaserootarginine catabolism[SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingchemistryMutationidentificationaccumulation010606 plant biology & botanyPlantcell physiology
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Addition of high C:N crop residues to a P-limited substrate constrains the benefits of arbuscular mycorrhizal symbiosis for wheat P and N nutrition

2021

Many aspects concerning the role of arbuscular mycorrhizal (AM) fungi in plant nutrient uptake from organic sources remain unclear. Here, we investigated the contribution of AM symbiosis to N and P uptake by durum wheat after the addition of a high C:N biomass to a P-limited soil. Plants were grown in pots in the presence or absence of a multispecies AM inoculum, with (Org) or without (Ctr) the addition of 15N-labelled organic matter (OM). A further treatment, in which 15N was applied in mineral form (Ctr+N) in the same amount as that supplied in the Org treatment, was also included. Inoculation with AM had positive effects on plant growth in both control treatments (Ctr and Ctr+N), mainly …

0106 biological sciencesCrop residueCanonical discriminant analysis; N:P ratio; Plant growth; Pot experiment; Triticum durum; Plant Roots; Soil; Symbiosis; Triticum; Mycorrhizaemedia_common.quotation_subject15N fertiliser recovery; Canonical discriminant analysis; N:P ratio; Plant growth; Pot experiment; Triticum durumBiomassPlant ScienceBiology01 natural sciencesPlant RootsCompetition (biology)03 medical and health sciencesSoilNutrientSymbiosisMycorrhizaeGeneticsOrganic matterSymbiosisMolecular BiologyEcology Evolution Behavior and SystematicsTriticumCanonical discriminant analysi030304 developmental biologymedia_commonPlant growthchemistry.chemical_classification0303 health sciencesPot experimentInoculationfungiSubstrate (chemistry)food and beveragesGeneral MedicineSettore AGR/02 - Agronomia E Coltivazioni ErbaceeAgronomychemistryTriticum durumN:P ratio15N fertiliser recoveryOriginal ArticleCanonical discriminant analysis010606 plant biology & botany
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Looking for Hidden Enemies of Metabarcoding: Species Composition, Habitat and Management Can Strongly Influence DNA Extraction while Examining Grassl…

2021

Despite the raising preoccupation, the critical question of how the plant community is composed belowground still remains unresolved, particularly for the conservation priority types of vegetation. The usefulness of metabarcoding analysis of the belowground parts of the plant community is subjected to a considerable bias, that often impedes detection of all species in a sample due to insufficient DNA quality or quantity. In the presented study we have attempted to find environmental factors that determine the amount and quality of DNA extracted from total plant tissue from above- and belowground samples (1,000 and 10,000 cm2). We analyzed the influence of land use intensity, soil properties…

0106 biological sciencesDNA qualitylcsh:QR1-502Plant Roots01 natural sciencesBiochemistrylcsh:MicrobiologyGrasslandgraminoid vegetationSoilCalamagrostis epigejosзлаковая растительностьSoil pHVegetation typeBiomassDNA extractionHolcus lanatusgeography.geographical_feature_categoryEcologybiologyвидовой составBiodiversityVegetationHydrogen-Ion ConcentrationPlantsGrasslandпастбищные сообществаЦентральная Европаbelowground diversityRegression AnalysisSeasonsДНКMagnesium OxideRiskrootsDNA PlantNitrogenPoaceae010603 evolutionary biologyкорнеплодыArticleCoronillaDNA Barcoding TaxonomicMolecular BiologyEcosystemgeographyсреда обитанияCentral EuropePlant communityDNAbiology.organism_classificationAgronomyметабаркодированиеPoland010606 plant biology & botanyBiomolecules
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Root hair anatomy and morphology in Posidonia oceanica (L.) Delile and substratum typology: First observations of a spiral form

2018

Abstract The morpho-anatomical root hair features of P. oceanica ramets collected in meadows settled on different substrata (sand, matte and rock) were analysed. On each substratum, nine plagiothropic rhizomes each one composed by 3–6 interconnected short shoots were collected between April and May 2016 at 10 m of depth. On sand and on rock, the adventitious roots showed two distinct tubular and spiral-shaped hairs, clustered in yellowish-gray gelatinous pads. Tubular root hair tips were dactiliform and generally attached to grains of rock fragments. Moreover, a sub-circular swelling zone occurred. On matte , root hairs did not form gelatinous pads, were very short and had a simple distal p…

0106 biological sciencesDistal portionMorphology (linguistics)010504 meteorology & atmospheric sciencesbiologyPosidonia oceanicaPlant ScienceRoot systemAnatomyAquatic ScienceRoot hairbiology.organism_classification01 natural sciencesRhizomePlant scienceType of root hairRock fragmentPosidonia oceanicaAnatomySubstratum010606 plant biology & botany0105 earth and related environmental sciencesAquatic Botany
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