Search results for " SIT"

showing 10 items of 2985 documents

2019

RNA interference (RNAi) is a powerful tool for studying functions of candidate genes in both model and nonmodel organisms and a promising technique for therapeutic applications. Successful application of this technique relies on the accuracy and reliability of methods used to quantify gene knockdown. With the limitation in the availability of antibodies for detecting proteins, quantitative PCR (qPCR) remains the preferred method for quantifying target gene knockdown after dsRNA treatment. We evaluated how qPCR primer binding site and target gene expression levels affect quantification of intact mRNA transcripts following dsRNA-mediated RNAi. The use of primer pairs targeting the mRNA sequen…

0106 biological sciences0303 health sciencesGene knockdownEcologyBiology010603 evolutionary biology01 natural sciencesCell biology03 medical and health sciencesRNA silencingRNA interferenceGene expressionGene silencingPrimer (molecular biology)Primer binding siteGeneEcology Evolution Behavior and Systematics030304 developmental biologyNature and Landscape ConservationEcology and Evolution
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Editorial: Exploring Plant Rhizosphere, Phyllosphere and Endosphere Microbial Communities to Improve the Management of Polluted Sites

2021

International audience

0106 biological sciences2. Zero hungerMicrobiology (medical)[SDV.EE]Life Sciences [q-bio]/Ecology environmentRhizospherepolluted sitesmicrobial communities04 agricultural and veterinary sciences15. Life on land01 natural sciencesMicrobiologyQR1-502high-throughput sequencing technologiesEditorial13. Climate actionBotany040103 agronomy & agricultureplant growth promoting microorganisms (PGPM)0401 agriculture forestry and fisheriesEnvironmental sciencehighthroughput sequencing technologiesPhyllosphereplant inoculationComputingMilieux_MISCELLANEOUS010606 plant biology & botanyFrontiers in Microbiology
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Activation of the plant plasma membrane H+ -ATPase. Is there a direct interaction between lysophosphatidylcholine and the C-terminal part of the enzy…

1996

The antagonistic effects of the fungal toxin beticolin-1 and of L-alpha-lysophosphatidylcholine (lysoPC) were investigated on the plasma membrane H+-ATPase of the plant Arabidopsis thaliana (isoform 2) expressed in yeast, using both wild-type enzyme (AHA2) and C-terminal truncated enzyme (aha2delta92). Phosphohydrolytic activities of both enzymes were inhibited by beticolin-1, with very similar 50% inhibitory concentrations, indicating that the toxin action does not involve the C-terminal located autoinhibitory domain of the proton pump. Egg lysoPC, a compound that activates the H+-ATPase by a mechanism involving the C-terminal part of the protein, was found to be able to reverse the inhibi…

0106 biological sciencesATPaseArabidopsismedicine.disease_cause01 natural sciencesBiochemistrychemistry.chemical_compoundStructural BiologyArabidopsis thalianaComputingMilieux_MISCELLANEOUSchemistry.chemical_classification0303 health sciencesbiologyPlantsRecombinant ProteinsIsoenzymesBeticolinProton-Translocating ATPasesLysophosphatidylcholineMembraneBiochemistryPlasma membrane H+-ATPase activationGene isoformAutoinhibitory domainDetergentsBiophysicsSaccharomyces cerevisiae[SDV.BC]Life Sciences [q-bio]/Cellular BiologyHeterocyclic Compounds 4 or More RingsStructure-Activity Relationship03 medical and health sciencesGeneticsmedicine[SDV.BC] Life Sciences [q-bio]/Cellular BiologyMolecular Biology030304 developmental biologyBinding SitesToxinCell MembraneLysophosphatidylcholinesCell BiologyMycotoxinsbiology.organism_classificationYeastEnzyme Activationl-α-LysophosphatidylcholineEnzymechemistryLiposomesbiology.protein010606 plant biology & botany
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Functional reconstitution of a proton-translocating system responsive to fusicoccin

1988

Crude fusicoccin binding proteins and a partially purified plasma membrane H+-transporting ATPase (EC 3.6.1.34), both solubilized from maize tissues, were simultaneously inserted into liposomes by the freeze-thaw method. ATP-driven intravesicular acidification in the proteoliposomes, measured by the fluorescence quenching of the dye 9-amino-6-chloro-2-methoxyacridine, markedly increased upon addition of fusicoccin to the reconstituted system. This effect could not be observed when binding sites and ATPase preparations were separately reconstituted into the proteoliposomes, thus demonstrating that fusicoccin binding to its receptor is a prerequisite for ATPase stimulation.

0106 biological sciencesATPase[SDV]Life Sciences [q-bio]01 natural sciences03 medical and health scienceschemistry.chemical_compoundProton transportGlycosidesBinding siteComputingMilieux_MISCELLANEOUSFluorescent Dyes030304 developmental biologychemistry.chemical_classification0303 health sciencesLiposomeBinding SitesMultidisciplinarybiologyAminoacridinesCell MembraneBiological activityPlants[SDV] Life Sciences [q-bio]Proton-Translocating ATPasesMembraneEnzymeSolubilitychemistryBiochemistryFusicoccinLiposomesbiology.proteinResearch Article010606 plant biology & botany
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Environment-sensitivity functions for gross primary productivity in light use efficiency models

2022

International audience; The sensitivity of photosynthesis to environmental changes is essential for understanding carbon cycle responses to global climate change and for the development of modeling approaches that explains its spatial and temporal variability. We collected a large variety of published sensitivity functions of gross primary productivity (GPP) to different forcing variables to assess the response of GPP to environmental factors. These include the responses of GPP to temperature; vapor pressure deficit, some of which include the response to atmospheric CO2 concentrations; soil water availability (W); light intensity; and cloudiness. These functions were combined in a full fact…

0106 biological sciencesAtmospheric Science010504 meteorology & atmospheric sciencesVapour Pressure DeficitBiomeRandomly sampled sitesPlant Ecology and Nature ConservationForcing (mathematics)04 Earth Sciences 06 Biological Sciences 07 Agricultural and Veterinary SciencesAtmospheric sciences01 natural sciences[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsFluxNetLaboratory of Geo-information Science and Remote SensingEvapotranspirationMeteorology & Atmospheric SciencesEcosystemLaboratorium voor Geo-informatiekunde en Remote SensingRadiation use efficiencySensitivity formulations0105 earth and related environmental sciencesGlobal and Planetary ChangeDiffuse fractionGlobal warmingModel equifinalityForestryModel comparison15. Life on landPE&RCLight intensity13. Climate actionEnvironmental sciencePlantenecologie en NatuurbeheerCarbon assimilationTemporal scalesAgronomy and Crop Science010606 plant biology & botany
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Nest sites of a strong excavator, the Great Spotted Woodpecker Dendrocopos major, in a primeval forest

2017

In managed forests, birds that create their own breeding holes in trees have limited access to substrates in which they can excavate. Therefore, nest site use in these forests possibly reflects availability of substrates more than species preferences. We analysed data on nest sites of Great Spotted Woodpeckers Dendrocopos major collected during 1987–2013 in the strictly protected part of Białowieża National Park in East Poland. The woodpeckers excavated breeding holes in 11 tree species, but species used in individual habitats varied greatly: Alder Alnus glutinosa was almost the only species used in the riverine forest; Common Aspen Populus tremula, Common Hornbeam Carpinus betulus and Pedu…

0106 biological sciencesCarpinus betulusgeographygeography.geographical_feature_categorybiologyEcology010604 marine biology & hydrobiologyScots pineWoodpeckertree holesbiology.organism_classificationOld-growth forest010603 evolutionary biology01 natural sciencesprimeval forestQuercus roburAlnus glutinosaNestDendrocopos majornest site usenest site choicewood decayhabitat occupancyAnimal Science and ZoologyEcology Evolution Behavior and SystematicsArdea
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Shrines in Central Italy conserve plant diversity and large trees

2015

Sacred natural sites (SNS) are instances of biocultural landscapes protected for spiritual motives. These sites frequently host important biological values in areas of Asia and Africa, where traditional resource management is still upheld by local communities. In contrast, the biodiversity value of SNS has hardly been quantitatively tested in Western contexts, where customs and traditions have relatively lost importance due to modernization and secularization. To assess whether SNS in Western contexts retain value for biodiversity, we studied plant species composition at 30 SNS in Central Italy and compared them with a paired set of similar but not sacred reference sites. We demonstrate tha…

0106 biological sciencesConservation of Natural Resources010504 meteorology & atmospheric sciencesSecularismmedia_common.quotation_subjectGeography Planning and DevelopmentCultureBiodiversityBiologyModernization theory010603 evolutionary biology01 natural sciencesTrees10127 Institute of Evolutionary Biology and Environmental Studies3305 Geography Planning and DevelopmentReportEnvironmental ChemistryResource managementSocial ChangePlant Dispersal0105 earth and related environmental sciencesmedia_commongeographygeography.geographical_feature_categoryCentral ItalyEcologyEcologyPlant DispersalGeneral MedicineBiodiversityOld-growth forestSpatial heterogeneityBiocultural conservationTraditional managementItaly2304 Environmental ChemistrySettore BIO/03 - Botanica Ambientale E ApplicataSacred natural site570 Life sciences; biology590 Animals (Zoology)Species richnessOld-growth forest2303 EcologyDiversity (politics)
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Binding Site Alteration Is Responsible for Field-Isolated Resistance to Bacillus thuringiensis Cry2A Insecticidal Proteins in Two Helicoverpa Species

2010

Background Evolution of resistance by target pests is the main threat to the long-term efficacy of crops expressing Bacillus thuringiensis (Bt) insecticidal proteins. Cry2 proteins play a pivotal role in current Bt spray formulations and transgenic crops and they complement Cry1A proteins because of their different mode of action. Their presence is critical in the control of those lepidopteran species, such as Helicoverpa spp., which are not highly susceptible to Cry1A proteins. In Australia, a transgenic variety of cotton expressing Cry1Ac and Cry2Ab (Bollgard II) comprises at least 80% of the total cotton area. Prior to the widespread adoption of Bollgard II, the frequency of alleles conf…

0106 biological sciencesCrops AgriculturalInsecticidesHelicoverpa punctigeraScienceUNESCO::CIENCIAS DE LA VIDA::Biología de insectos (Entomología)::Entomología generalBacillus thuringiensisBacterial ProteinGenetically modified cropsHelicoverpa armigera01 natural sciencesMicrobiologyLepidoptera genitaliaInsecticide Resistance03 medical and health sciencesBacterial ProteinsBacillus thuringiensisBotanyBacillus thuringiensiBiotechnology/Applied MicrobiologyAnimalsMode of actionBiotechnology/Plant BiotechnologyHelicoverpaInsecticide030304 developmental biology0303 health sciencesMultidisciplinaryBinding SitesbiologyAnimalQfungiBinding SiteRbiology.organism_classificationBinding site alterationHelicoverpa speciesLepidoptera010602 entomologyCry1AcBacillus thuringiensis; Binding site alteration; Helicoverpa speciesMedicine:CIENCIAS DE LA VIDA::Biología de insectos (Entomología)::Entomología general [UNESCO]Plant Biology/Agricultural BiotechnologyResearch ArticleProtein BindingPLoS ONE
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Diversion of Fishing Pressure on the Economically Important Species Barbus barbus (Linnaeus, 1758) to Protect the Community Interest Congeneric Barbu…

2018

Abstract The ADONIS:CE instrument has been used in the field of congeners species, Barbus barbus – of economic interest and Barbus meridionalis – of conservation interest, to build a support-system model for management decision-making. Analysis of the habitat needs and the indicators for favorable conservation status have identified pressures and threats to these fish species for which management actions have been proposed. This management system favors the decrease of fishing pressure on Barbus meridionalis species by its transfer to Barbus barbus species.

0106 biological sciencesDecision support systemEcology (disciplines)Fishingfish species habitat necessities010501 environmental sciencestârnava river basin01 natural sciencesBarbus meridionalisromaniaQH540-549.50105 earth and related environmental sciencesthreatsbiologyEcology010604 marine biology & hydrobiologyAquatic animalBarbus barbusbiology.organism_classificationpressuresFisheryGeographyon site adapted management elementsManagement systemFisheries managementtransylvaniaTransylvanian Review of Systematical and Ecological Research
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Translocation of meadow, heath and fen to the habitat garden : the first insights after 4 years of the experiment

2018

0106 biological sciencesEcologybiologyWet meadowEcology010604 marine biology & hydrobiologyCalamagrostis epigejostranslocationChromosomal translocationwinners and losersManagement Monitoring Policy and Lawbiology.organism_classificationinvasion010603 evolutionary biology01 natural scienceswet meadowCalamagrostis epigejosHabitatvegetationmedicinemedicine.symptomVegetation (pathology)ex situNature and Landscape Conservation
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