Search results for " SIT"

showing 10 items of 2985 documents

Southern and fluorescent in situ hybridization detect three RAPD-generated PCR products useful as introgression markers in Petunia

1999

Fluorescent in situ hybridization (FISH) was used to reveal the intrachromosomal organization of 11 RAPD markers localized on the genetic map of Petunia hybrida. The cloned RAPD markers were analyzed by means of Southern hybridization to determine their level of sequence repetition and their specificity in different Petunia species with 2n=14 and 18 chromosomes. The same probes were then used in FISH experiments. Most of the RAPD clones studied showed high sequence repetition and no species specificity. Moreover, FISH analysis showed that these probes could belong to multilocus families as evidenced by the multiple FISH signals dispersed throughout the genome and present on every chromosome…

0106 biological sciencesIntrogression[SDV.GEN] Life Sciences [q-bio]/GeneticsBiology01 natural sciencesGenome03 medical and health sciencesGene mappingRAPDGeneticsmedicineComputingMilieux_MISCELLANEOUS030304 developmental biologySouthern blotGenomic organizationGenetics0303 health sciences[SDV.GEN]Life Sciences [q-bio]/Geneticsmedicine.diagnostic_testChromosomeGeneral MedicineRAPDAgronomy and Crop Science010606 plant biology & botanyBiotechnologyFluorescence in situ hybridization
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Spatial monitoring of gene activity in extraradical and intraradical developmental stages of arbuscular mycorrhizal fungi by direct fluorescent in si…

2008

International audience; Gene expression profiling based on tissue extracts gives only limited information about genes associated with complex developmental processes such as those implicated in fungal interactions with plant roots during arbuscular mycorrhiza development and function. To overcome this drawback, a direct fluorescent in situ RT-PCR methodology was developed for spatial mapping of gene expression in different presymbiotic and symbiotic structures of an arbuscular mycorrhizal fungus. Transcript detection was optimized by targeting the LSU rRNA gene of Glomus intraradices and monitoring expression of a stearoyl-CoA-desaturase gene that is consistently expressed at high levels in…

0106 biological sciencesMYCORHIZES A ARBUSCULESGENE EXPRESSIONHyphaGLOMUS INTRARADICESDIRECT FLUORESCENT IN SITU RT-PCR01 natural sciencesMicrobiologyPlant RootsARBUSCULAR MYCORRHIZAL FUNGIFungal ProteinsSUPEROXIDE DISMUTASE03 medical and health sciencesFungal StructuresGene Expression Regulation FungalMycorrhizaeBotanyGene expressionGeneticsMedicagoCONFOCAL MICROSCOPYGene030304 developmental biologyDNA PrimersFluorescent DyesPeptidylprolyl isomerase0303 health sciences[SDV.GEN]Life Sciences [q-bio]/GeneticsMicroscopy ConfocalbiologyPEPTIDYLPROPYL ISOMERASEReverse Transcriptase Polymerase Chain ReactionGene Expression ProfilingfungiSYMBIOSISGene Expression Regulation DevelopmentalPeptidylprolyl Isomerasebiology.organism_classificationMedicago truncatulaCell biologyArbuscular mycorrhizaGene expression profilingSTEAROYL-CoA-DESATURASEXanthenesMEDICAGO TRUNCATULAStearoyl-CoA Desaturase010606 plant biology & botany
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Reproductive site selection: evidence of an oviposition cue in a highly adaptive dipteran, Drosophila suzukii (Diptera: Drosophilidae)

2020

Abstract Drosophila suzukii (Matsumura) is a vinegar fly species that originates from Eastern Asia and has spread throughout Europe and the Americas since its initial detection in United States in 2008. Its relatively large, sclerotized, and serrated ovipositor enables the ability to penetrate ripening fruits, providing a protected environment for its egg and larval stages. Because the mechanism of oviposition site selection of D. suzukii is a matter of hypothesis, the aim of the present study was to elucidate behavioral and chemical aspects of short-range ovipositional site selection within the context of D. suzukii reproductive biology. The preference of D. suzukii to lay eggs on artifici…

0106 biological sciencesMaleOvipositionZoologyContext (language use)Chemical ecologyBiology01 natural sciences03 medical and health sciencesInsect behaviorDrosophilidaeparasitic diseasesReproductive biologyAnimalsDrosophila suzukiiOviposition site selectionEcology Evolution Behavior and Systematics030304 developmental biologyOvumSpotted-wing Drosophila0303 health sciencesLarvaEcologyInvasive speciesAsia EasternfungiRipeningbiology.organism_classificationChemical ecologyEurope010602 entomologySettore AGR/11 - ENTOMOLOGIA GENERALE E APPLICATAInsect ScienceOvipositorDrosophilaFemaleCues
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Egalitarian mixed-species bird groups enhance winter survival of subordinate group members but only in high-quality forests

2020

AbstractOnly dominant individuals have unrestricted access to contested resources in group-living animals. In birds, subordinates with restricted access to resources may respond to intragroup contests by acquiring extra body reserves to avoid periods of food shortage. In turn, higher body mass reduces agility and increases predation and mortality risk to subordinates. Birds often live in hierarchically organized mixed-species groups, in which heterospecific individuals are considered to substitute for conspecifics as protection against predators at a significantly reduced competition cost. Crested tits (Lophophanes cristatus) and willow tits (Poecile montanus) form mixed-species groups duri…

0106 biological sciencesMaleWillowBehavioural ecologyZoologylcsh:Medicine010603 evolutionary biology01 natural sciencesArticlePredationSongbirdsWillow titmedicineDominance (ecology)Animalslcsh:ScienceForaging sites ; mixed-species groups ; social complexity ; predation riskSocial evolutionMultidisciplinarybiologyAggressionlcsh:RInterspecific competitionbiology.organism_classificationAdaptation Physiological010601 ecologyDominance hierarchySocial DominancePoecilelcsh:QFemaleSeasonsmedicine.symptom
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Fungal Diversity in the Mediterranean Area

2020

The Special Issue entitled “Fungal Diversity in the Mediterranean Area” aimed at highlighting the role of various organisms in the Mediterranean habitat. The role of fungi at the root and phyllosphere level; the biodiversity in small island territories and the sea; rare forms of fungi never previously found; the commercial, food, and therapeutic value of some ascomycetes and basidiomycetes; the diversity related to fungi associated with galls on plants; and the important role of culture collection for the ex situ conservation of fungal biodiversity are the topics dealt with in this Special Issue.

0106 biological sciencesMediterranean climateBiodiversitybioprospectingmycorrhizaBiology010603 evolutionary biology01 natural sciencesMediterranean forestlcsh:QH301-705.5Marine fungiNature and Landscape ConservationBioprospectingGenetic diversityEcologyEcology010604 marine biology & hydrobiologyEcological Modelingmarine fungifungiEx situ conservationAgricultural and Biological Sciences (miscellaneous)medicinal mushroomfungal diversityHabitatlcsh:Biology (General)PhyllosphereDiversity
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Analysis of movement patterns and macrohabitat use in Hermann’s tortoises (Testudo hermanni hermanni, Gmelin 1789) reintroduced in a coastal area dom…

2016

The Hermann’s tortoise is a strictly European species found mostly in areas with Mediterranean and sub-Mediterranean climes and, especially the subspecies T. hermanni hermanni, has to deal with various threats which reduced its geographic distribution to only a few isolated populations. Thus, with the objective of recovering natural populations of the species, numerous reintroduction projects are being carried out throughout its historical and prehistorical geographic distribution. The aim of our study is to evaluate the success of the T. hermanni reintroduction project carried out in the Albufera de Valencia Natural Park since 2011, through the analysis of movements, home range sizes and h…

0106 biological sciencesMediterranean climateIn situ conservationTortoiseTestudo hermanniEcology010604 marine biology & hydrobiologyHome rangeBiologySubspeciesbiology.organism_classification010603 evolutionary biology01 natural sciencesHabitatAnimal Science and ZoologyCarapaceEcology Evolution Behavior and SystematicsAmphibia-Reptilia
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Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization

2010

Abstract Background The shell of the pearl-producing bivalve Pinctada margaritifera is composed of an organic cell-free matrix that plays a key role in the dynamic process of biologically-controlled biomineralization. In order to increase genomic resources and identify shell matrix proteins implicated in biomineralization in P. margaritifera, high-throughput Expressed Sequence Tag (EST) pyrosequencing was undertaken on the calcifying mantle, combined with a proteomic analysis of the shell. Results We report the functional analysis of 276 738 sequences, leading to the constitution of an unprecedented catalog of 82 P. margaritifera biomineralization-related mantle protein sequences. Component…

0106 biological sciencesModels MolecularProteomicsProteome[SDV]Life Sciences [q-bio]Proteomics01 natural sciencesContig MappingMantle (mollusc)MargaritiferaIn Situ HybridizationGeneticsExpressed Sequence Tags0303 health sciencesMineralsbiologyPinctada margaritifera[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeBiotechnologyResearch Articlelcsh:QH426-470Sequence analysislcsh:BiotechnologyMolecular Sequence Data010603 evolutionary biology03 medical and health sciencesCalcification Physiologiclcsh:TP248.13-248.65[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]GeneticsAnimals[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequencePinctadaRNA Messenger[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/Biomaterials030304 developmental biologyBase SequenceSequence Homology Amino AcidGene Expression ProfilingAnimal StructuresMolecular Sequence AnnotationSequence Analysis DNAbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialslcsh:GeneticsGene Expression RegulationEvolutionary biologyPinctadaBiomineralization
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Evidence for specific, high-affinity binding sites for a proteinaceous elicitor in tobacco plasma membrane

1995

Abstract Binding of cryptogein, a proteinaceous elicitor, was studied on tobacco plasma membrane. The binding of the [125I]cryptogein was saturable, reversible and specific with an apparent Kd of 2 nM. A single class of cryptogein binding sites was found with a sharp optimum pH for binding at about pH 7.0. The high-affinity correlates with cryptogein concentrations required for biological activity in vivo.

0106 biological sciencesNicotiana tabacumBiophysics[SDV.BC]Life Sciences [q-bio]/Cellular Biology01 natural sciencesBiochemistryFungal Proteins03 medical and health sciencesStructural BiologyIn vivoTobaccoGeneticsBinding siteReceptor[SDV.BC] Life Sciences [q-bio]/Cellular BiologyMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesBinding SitesbiologyNicotiana tabacumChemistryAlgal ProteinsCell MembraneElicitinBiological activityCell BiologyElicitorbiology.organism_classification3. Good healthElicitorKineticsPlants ToxicMembraneBiochemistryCryptogeinPlasma membraneReceptor010606 plant biology & botany
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Characterization of (3H) acifluorfen binding to purified pea etioplasts, and evidence that protoporphyrinogen oxidase specifically binds acifluorfen

1992

It is now generally accepted that protoporphyrinogen oxidase is the target-enzyme for diphenylether-type herbicides. Recent studies [Camadro, J-M., Matringe, M., Scalla, R. & Labbe, P. (1991) Biochem. J. 277, 17–21] have revealed that in maize, diphenyl ethers competitively inhibit protoporphyrinogen oxidase with respect to its substrate, protoporphyrinogen IX. In this study, we show that, in purified pea etioplast, [3H]acifluorfen specifically binds to a single class of high-affinity binding sites with an apparent dissociation constant of 6.2 ± 1.3 nM and a maximum density of 29 ± 5 nmol/g protein. [3H]Acifluorfen binding reaches equilibrium in about 1 min at 30°C. Half dissociation occurs…

0106 biological sciencesOxidoreductases Acting on CH-CH Group DonorsStereochemistry[SDV]Life Sciences [q-bio]PhthalimidesAcifluorfen01 natural sciencesBiochemistrySubstrate Specificity03 medical and health scienceschemistry.chemical_compoundMALHERBOLOGIEEtioplastProtoporphyrinogen OxidaseBinding siteComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classificationOrganelles0303 health sciencesOxidase testBinding SitesPlants MedicinalProtoporphyrin IXMolecular StructureBIOCHIMIEHerbicidesFabaceaeProtoporphyrinogen IX[SDV] Life Sciences [q-bio]KineticsEnzymechemistryBiochemistryNitrobenzoatesProtoporphyrinogen oxidaseOxidoreductases010606 plant biology & botany
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Breeding success of the Great Tit Parus major in relation to attributes of natural nest cavities in a primeval forest

2015

An overlap in attributes of nest cavities used by Great Tit Parus major across Eurasia suggests similar nest site preferences within the geographical range, although the drivers of these preferences are unclear. To determine whether preferred cavities provide conditions enhancing successful reproduction, we investigated the breeding performance of Great Tits in relation to tree cavity characteristics using data collected during 2008–2011 in primeval conditions (Białowieża National Park, Poland). Here, tree cavities are diverse and superabundant but nesting birds are at risk from a variety of predators. According to expectations, nest losses were high (60 % of Great Tit nests failed), mostly…

0106 biological sciencesParusAvian clutch sizegeographygeography.geographical_feature_categorybiologyDryomys nitedulaEcologyOld-growth forestbiology.organism_classification010603 evolutionary biology01 natural sciencesEcology and Environment010605 ornithologyPredationNestbiology.animalTree cavities Nest site selection Adaptations Nest predation Clutch size Białowieża National ParkDormouseZoologyNest boxJournal of Ornithology
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