Search results for " SOIL"

showing 10 items of 774 documents

Seasonal fluctuations and long-term persistence of pathogenic populations of Agrobacterium spp. in soils.

2002

ABSTRACT Short- and long-term persistence of pathogenic (i.e., tumor forming) agrobacteria in soil was investigated in six nursery plots with a history of high crown gall incidence. No pathogenic Agrobacterium strains were isolated in soil samples taken in fall and winter in any plots, but such strains were isolated from both bulk soils and weed rhizospheres (over 0.5 × 10 5 pathogenic CFU/g of bulk soil or rhizosphere) in three out of six plots in spring and summer. PCR amplifications of a vir sequence from DNA extracted from soil confirmed the presence of Ti plasmids in summer and their absence in fall and winter. The results indicate that strains that harbor a Ti plasmid had an unforesee…

[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyBiovarApplied Microbiology and BiotechnologyPolymerase Chain ReactionTi plasmidchemistry.chemical_compoundPlant MicrobiologyMESH : EcosystemMESH : DNA BacterialMESH: EcosystemMESH : Polymerase Chain ReactionComputingMilieux_MISCELLANEOUSSoil Microbiology2. Zero hungerOctopine[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesRhizosphereeducation.field_of_studyEcologybiologyBacterialHorticulture[SDV.EE] Life Sciences [q-bio]/Ecology environmentPOUVOIR PATHOGENESeasonsSoil microbiologyBiotechnologyPlasmidsRhizobiumMESH: RhizobiumDNA BacterialAgrobacteriumPopulationMESH : Soil MicrobiologyBulk soilMESH : Rhizobium03 medical and health sciencesMESH: PlasmidsBotany[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyeducationEcosystem030304 developmental biologyMESH : Seasons030306 microbiologyMESH: Polymerase Chain ReactionDNAbiology.organism_classificationMESH: DNA BacterialchemistryMESH: Soil MicrobiologyMESH : PlasmidsMESH: SeasonsFood Science
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Acyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas spp.

2001

ABSTRACT A total of 137 soilborne and plant-associated bacterial strains belonging to different Pseudomonas species were tested for their ability to synthesize N -acyl-homoserine lactones (NAHL). Fifty-four strains synthesized NAHL. Interestingly, NAHL production appears to be more common among plant-associated than among soilborne Pseudomonas spp. Indeed, 40% of the analyzed Pseudomonas syringae strains produced NAHL which were identified most often as the short-chain NAHL, N -hexanoyl- l -homoserine lactone, N -(3-oxo-hexanoyl)-homoserine lactone, and N -(3-oxo-octanoyl)- l -homoserine lactone (no absolute correlation between genomospecies of P. syringae and their ability to produce NAHL …

[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyMESH: Sequence Analysis DNAMESH : Molecular Sequence DataMESH: PlantsMESH: Amino Acid SequenceErwiniaMESH: Base SequenceApplied Microbiology and Biotechnologychemistry.chemical_compoundPlant MicrobiologyMESH: Plant Diseases4-ButyrolactoneChromobacteriumPseudomonas syringaeMESH : Bacterial ProteinsMESH : DNA BacterialCloning MolecularMESH: Bacterial ProteinsComputingMilieux_MISCELLANEOUSSoil Microbiology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesMESH: Gene Expression Regulation BacterialMESH: Genetic Complementation TestEcologybiologyMESH : Amino Acid SequenceMESH : Plant DiseasesPseudomonasBacterialMESH : 4-ButyrolactonePlantsN-ACYL-HOMOSERINE LACTONE[SDV.EE] Life Sciences [q-bio]/Ecology environmentPseudomonadalesSequence AnalysisBiotechnologyPseudomonadaceaeMESH : Gene Expression Regulation BacterialDNA BacterialMESH : Cloning MolecularMESH : Soil MicrobiologyCarbon-Oxygen LyasesMolecular Sequence DataHomoserineMESH : PlantsMicrobiologyMESH: Carbon-Oxygen Lyases03 medical and health sciencesBacterial ProteinsPseudomonas[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMESH: Cloning MolecularAmino Acid SequenceMESH : Carbon-Oxygen Lyases030304 developmental biologyPlant DiseasesMESH: Molecular Sequence DataMESH : Genetic Complementation TestBase Sequence030306 microbiologyPantoeaGenetic Complementation TestMolecularMESH: PseudomonasGene Expression Regulation BacterialSequence Analysis DNADNAbiology.organism_classificationMESH: DNA BacterialchemistryGene Expression RegulationMESH: Soil MicrobiologyMESH: 4-ButyrolactoneMESH : Base SequenceFood ScienceMESH : PseudomonasMESH : Sequence Analysis DNACloning
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Effets à long terme de l'apport répété de déchets organiques sur l'évolution de la matière organique et des éléments trace métalliques dans un sol sa…

2002

The distribution of trace metal elements (ETM) in soils depends on physico-chemical characteristics of the soil (pH, redox potential …) and does not remain fixed during time. The objective of this work was to study the long-term effects of the organic waste applications (sewage sludge and manure) on the evolution of the ETM and the organic matter in a cultivated soil. This study was made on the acid sandy soil of the experimental site of Ambarès (Gironde) set up in 1974 by the INRA of Bordeaux. During 20 years, this soil, cultivated in maize, received various organic applications (manure 10 t ha-1 year-1, sludges 10 t ha-1 year-1 and sludges 100 t ha-1 year-1), which stopped in 1993. This s…

[CHIM.ANAL] Chemical Sciences/Analytical chemistry[SDU.STU.GC] Sciences of the Universe [physics]/Earth Sciences/Geochemistry[ SDU.ENVI ] Sciences of the Universe [physics]/Continental interfaces environmenttrace elementsandy soil[ CHIM.ANAL ] Chemical Sciences/Analytical chemistryElements trace métalliques[ SDU.STU.GC ] Sciences of the Universe [physics]/Earth Sciences/Geochemistrymatière orgganique[SDU.ENVI] Sciences of the Universe [physics]/Continental interfaces environmentorganic waste
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Ecological role of mycotoxins in wheat crop residues and consequences on the multitrophic interactions in the soil and further development of Fusariu…

2009

Format du poster : 21 X 29,7; absent

[SDE.BE] Environmental Sciences/Biodiversity and Ecology[SDV.SA]Life Sciences [q-bio]/Agricultural sciences[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology[SDV.SA] Life Sciences [q-bio]/Agricultural scienceswheat cropmultitrophic interactions in the soilconsequencesdevelopment of Fusarium graminearum[SDE.BE]Environmental Sciences/Biodiversity and Ecology[ SDV.SA ] Life Sciences [q-bio]/Agricultural sciencesecological role of mycotoxins
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Effect of cropping cycles and repeated herbicide applications on the degradation of diclofop-methyl, bentazone, diuron, isoproturon and pendimethalin…

2002

A greenhouse study was conducted to investigate the ability of four crops (wheat, corn, oilseed rape and soybean) to influence the degradation of bentazone, diclofop-methyl, diuron, isoproturon and pendimethalin in soil. The present study showed that microbial biomass-carbon was significantly higher in planted soils than in bulk soil, especially with wheat and corn, after several cropping cycles. The biomass in corn and soybean planted soils was adversely affected by bentazone but recovered after three cropping cycles. In wheat-planted soils, diclofop-methyl application resulted in persistent increase of the amount of microbial biomass. Bentazone did not show accelerated degradation even af…

[SDE] Environmental SciencesCrops Agricultural[SDV]Life Sciences [q-bio]Bulk soil010501 environmental sciencesBenzothiadiazinescomplex mixtures01 natural scienceschemistry.chemical_compoundSoilHalogenated Diphenyl EthersBiomassCarbon RadioisotopesComputingMilieux_MISCELLANEOUSSoil Microbiology0105 earth and related environmental sciences2. Zero hungerCambisolRhizosphereMethylurea CompoundsMineralsAniline CompoundsBacteriaChemistryHerbicidesPhenyl EthersPhenylurea Compoundsfungifood and beveragesAgriculture04 agricultural and veterinary sciencesGeneral MedicineMineralization (soil science)15. Life on landPesticideCarbon DioxideEnvironment Controlled[SDV] Life Sciences [q-bio]PendimethalinKineticsAgronomyInsect ScienceDiuronSoil water[SDE]Environmental Sciences040103 agronomy & agriculturePesticide degradation0401 agriculture forestry and fisheriesAgronomy and Crop SciencePest management science
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A method for the preparation of repacked soil cores with homogeneous aggregates for studying microbial nitrogen transformations under highly controll…

1998

International audience; he feasibility of studies on nitrate transformations during incubation in controlled conditions of air-filled porosity using a method of soil core preparation was investigated. Repacked cores were obtained by uniaxial confined compression in a cylindrical mould of a mass of calibrated and conveniently wet aggregates with a water content selected to saturate the textural porosity of the soil aggregates, imposing structural porosity and thereby producing controlled conditions of aeration. The principle and the descrip- tion of the incubation method are explained and some denitrification and respiration data obtained with low and increasing OZ partial pressures are pres…

[SDE] Environmental SciencesDenitrificationMaterials scienceSoil test[SDV]Life Sciences [q-bio][SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/AgronomySoil Sciencechemistry.chemical_elementMineralogySoil science[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyMicrobiology03 medical and health sciencesnitrateSample preparationPorosityWater contentCONTROLE DU MILIEU0303 health sciencesCompacted soil cores030306 microbiology04 agricultural and veterinary sciencesincubationNitrogen[SDV] Life Sciences [q-bio]Soil structurechemistryInsect Science[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriescontrolled aerationAerationoxygen
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Effets simultanés de niveaux croissants de glucose et de pressions partielles en oxygène sur la dénitrification et la réduction dissimilative du nitr…

1998

International audience; Dissimilatory nitrate reduction to ammonium (DNRA) and its importance in comparison to denitrification were studied in soil samples artificially repacked to control water potential and porosity, and incubated for 72 h. Labelled nitrate (100 mg N.kg-’ dry soil, 21.8 % 15N in excess) and increasing levels of glucose-C (250, 500 and 1 000 mg glucose-Ckg-’ dry soil) were initially added to the soil samples to obtain increasing glucose-C/nitrate-N ratios of 2.5,5 and 10, which were then subjected to different 0, partial pressures (0,0.5, 1.0 and 2.0 % (v/v)). The results confirmed the good reproducibility of the experimental condi- tions using this method. Denitrification…

[SDE] Environmental SciencesDenitrificationSoil test[SDV]Life Sciences [q-bio][SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/AgronomySoil Sciencechemistry.chemical_elementMineralogy010501 environmental sciences[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study01 natural sciencesMicrobiologyOxygenchemistry.chemical_compoundNitrateAmmoniumréduction de nitrateglucoseNitrogen cycle0105 earth and related environmental sciencescarbonregulation04 agricultural and veterinary sciencesPartial pressurerepacked soil core6. Clean water[SDV] Life Sciences [q-bio]chemistryInsect ScienceEnvironmental chemistry[SDE]Environmental Sciences040103 agronomy & agricultureDenitrification0401 agriculture forestry and fisheriesdissimilatory nitrate reduction to ammonium (DNRA)Carbonoxygen
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Medicago species affect the community composition of arbuscular mycorrhizal fungi associated with roots

2007

National audience; The symbiosis between plants and arbuscular mycorrhizal fungi (AMF) is ancient and involves 80% of terrestrial plant families. The symbiotic association between AMF and plants was described to be non specific. However, AMF were reported to influence plant community diversity and productivity. On the other way, the effect of plant genotypes belonging to closely related species on AMF diversity has not been explored so far. The aim of this work was to assess the impact of four different Medicago species, M. laciniata, M. murex, M. polymorpha and M. truncatula cv. Jemalong J5, on the composition of AM fungal community, when cultivated in a silty-thin clay soil (Mas d’Imbert,…

[SDE] Environmental SciencesGenotypeANNUAL MEDICSPhysiology[SDV]Life Sciences [q-bio]Bulk soilQUANTITATIVE POLYMERASE CHAIN REACTIONPlant ScienceBiologyMEDICAGODNA RibosomalPlant RootsLARGE RIBOSOMAL SUBINIT RIBOSOMAL DEOXYRIBONUCLEIC ACID (LSU RDNA)03 medical and health sciencesARBUSCULAR MYCORRHIZAL (AM) FUNGISpecies SpecificityMedicago laciniataMycorrhizaeLarge ribosomal subunitBotany[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMedicago polymorpha[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyPhylogenyGlomusDNA PrimersGene Library030304 developmental biology0303 health sciencesMedicagofungiGenetic Variationfood and beverages04 agricultural and veterinary sciences15. Life on landRIBOBOMAL DEOXYRIBONUCLEIC ACID (LSU RDNU)biology.organism_classificationMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy[SDV] Life Sciences [q-bio]LARGE RIBOSOMAL SUBINIT[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriesGENETIC DIVERSITYQUANTITATIVE POLYMERASCHAIN REACTIONMedicago murex
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Leaching of glyphosate and AMPA under two soil management practices in Burgundy vineyards (Vosne-Romanée, 21-France)

2005

Some drinking water reservoirs under the vineyards of Burgundy are contaminated with herbicides. Thus the effectiveness of alternative soil management practices, such as grass cover, for reducing the leaching of glyphosate and its metabolite, AMPA, through soils was studied. The leaching of both molecules was studied in structured soil columns under outdoor conditions for 1 year. The soil was managed under two vineyard soil practices: a chemically treated bare calcosol, and a vegetated calcosol. After 680 mm of rainfall, the vegetated calcosol leachates contained lower amounts of glyphosate and AMPA (0.02% and 0.03%, respectively) than the bare calcosol leachates (0.06% and 0.15%, respectiv…

[SDE] Environmental SciencesHealth Toxicology and Mutagenesis010501 environmental sciencesToxicology01 natural sciences[ SDE ] Environmental SciencesSoil managementchemistry.chemical_compoundSoilAMPASoil PollutantsVitisLeaching (agriculture)Water pollutionComputingMilieux_MISCELLANEOUS2. Zero hungerAgriculture04 agricultural and veterinary sciencesGeneral MedicinePollutionSoil contaminationSTRUCTURED SOIL COLUMN6. Clean waterGlyphosate[SDE]Environmental SciencesFrancePorosityEnvironmental MonitoringGRASS COVERGlycineGLYPHOSATEPoaceaecomplex mixturesWater MovementsHumansalpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid0105 earth and related environmental sciencesCambisolHerbicides15. Life on land[SDE.ES]Environmental Sciences/Environmental and SocietyTRANSPORTAgronomychemistrySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceGroundwaterWater Pollutants Chemical
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Differential Responses of Nitrate Reducer Community Size, Structure, and Activity to Tillage Systems

2009

ABSTRACT The main objective of this study was to determine how the size, structure, and activity of the nitrate reducer community were affected by adoption of a conservative tillage system as an alternative to conventional tillage. The experimental field, established in Madagascar in 1991, consists of plots subjected to conventional tillage or direct-seeding mulch-based cropping systems (DM), both amended with three different fertilization regimes. Comparisons of size, structure, and activity of the nitrate reducer community in samples collected from the top layer in 2005 and 2006 revealed that all characteristics of this functional community were affected by the tillage system, with increa…

[SDE] Environmental SciencesNITROUS-OXIDE EMISSIONSApplied Microbiology and BiotechnologyMicrobial EcologyCARBON[ SDE ] Environmental Sciences03 medical and health scienceschemistry.chemical_compoundHuman fertilizationNitrateMadagascarMANAGEMENTAGRICULTURAL SOILSNitritesSoil Microbiology[SDV.EE]Life Sciences [q-bio]/Ecology environment2. Zero hunger0303 health sciencesNitratesConventional tillageLAND-USEEcologyReducer030306 microbiologyMICROBIAL BIOMASSCONVENTIONAL TILLAGEAgricultureBiodiversityDENITRIFICATION04 agricultural and veterinary sciencesTillageSoil conditionerORGANIC-MATTERDENITRIFYING BACTERIAchemistryAgronomy[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceOxidation-ReductionMulchSoil microbiologyFood ScienceBiotechnology
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