Search results for " Simulation"

showing 10 items of 4034 documents

VEF Traces: A Framework for Modelling MPI Traffic in Interconnection Network Simulators

2015

Simulation is often used to evaluate the behaviour and measure the performance of computing systems. Specifically, in high-performance interconnection networks, the simulation has been extensively considered to verify the behaviour of the network itself and to evaluate its performance. In this context, network simulation must be fed with network traffic, also referred to as network workload, whose nature has been traditionally synthetic. These workloads can be used for the purpose of driving studies on network performance, but often such workloads are not accurate enough if a realistic evaluation is pursued. For this reason, other non-synthetic workloads have gained popularity over last dec…

InterconnectionNetwork architectureComputer scienceDistributed computingMessage passingMessage Passing InterfaceTraffic modelNetwork performanceContext (language use)Network traffic controlNetwork simulationNetwork traffic simulation2015 IEEE International Conference on Cluster Computing
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On the development of a communication-aware task mapping technique

2004

Clusters have become a very cost-effective platform for high-performance computing. In these systems, although currently existing networks actually provide enough bandwidth for the existing applications and workstations, the trend is towards the interconnection network becoming the system bottleneck. Therefore, in the future, scheduling strategies will have to take into account the communication requirements of the applications and the communication bandwidth that the network can offer. One of the key issues in these strategies is the task mapping technique used when the network becomes the system bottleneck.In this paper, we propose a communication-aware mapping technique that tries to mat…

InterconnectionWorkstationbusiness.industryComputer scienceDistributed computingLoad balancing (computing)BottleneckNetwork traffic controllaw.inventionScheduling (computing)Network simulationHardware and ArchitecturelawTimestampbusinessSoftwareComputer networkJournal of Systems Architecture
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IMFLer: A Web Application for Interactive Metabolic Flux Analysis and Visualization.

2021

Increasing genome-wide data in biological sciences and medicine has contributed to the development of a variety of visualization tools. Several automatic, semiautomatic, and manual visualization tools have already been developed. Some even have integrated flux balance analysis (FBA), but in most cases, it depends on separately installed third party software that is proprietary and does not allow customization of its functionality and has many restrictions for easy data distribution and analysis. In this study, we present an interactive metabolic flux analyzer and visualizer (IMFLer)-a static single-page web application that enables the reading and management of metabolic model layout maps, …

Interface (Java)Computer sciencebusiness.industryComputational BiologyWeb BrowserFile formatModels BiologicalMetabolic Flux AnalysisFlux balance analysisVisualizationPersonalizationComputational MathematicsUser-Computer InterfaceSoftwareComputational Theory and MathematicsGraph drawingModeling and SimulationGeneticsWeb applicationbusinessSoftware engineeringMolecular BiologyAlgorithmsSoftwareJournal of computational biology : a journal of computational molecular cell biology
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Thermodynamics-based gradient plasticity theories with an application to interface models

2008

AbstractIn the framework of small deformations, the so-called residual-based gradient plasticity theory is reconsidered and improved. Using the notion of moving geometrically necessary dislocations (GNDs), suitable micromechanics interpretations are heuristically given for the higher order boundary conditions and the long distance particle interactions. Also, a comparison is made between this theory and the analogous virtual work principle (VWP)-based one, whereby their respective conceptual and methodological features are pointed out. The conditions under which the two theories lead to a same constitutive model are investigated, showing that, correspondingly, a certain indeterminacy exhibi…

Interface (Java)Mechanical EngineeringApplied MathematicsConstitutive equationDislocationsMicromechanicsResidualCondensed Matter PhysicsGradient plasticityIndeterminacy (literature)Nonlocal continuum thermodynamicsClassical mechanicsMaterials Science(all)Mechanics of MaterialsModeling and SimulationModelling and SimulationGeneral Materials SciencePoint (geometry)Virtual workBoundary value problemStatistical physicsMathematicsInternational Journal of Solids and Structures
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Un élément fini mixte tridimensionnel pour le calcul des contraintes d'interface

1999

ABSTRACT In this paper we present an interfacial finite element designed for analysing planar interfaces in a three-dimensional approach. The element is derived from Hellinger-Reissner's mixed variational principle and takes into account the continuity of the displacement and of the transverse stress components through the interface. Stress analysis of a sandwich plate is made to assess the validity and the effectiveness of the element models, with comparisons to closed-form and numerical solutions.

Interface (Java)Mechanical EngineeringComputational MechanicsGeometryFinite element methodStress (mechanics)Computational MathematicsPlanarMechanics of MaterialsVariational principleModeling and SimulationTransverse shearElement (category theory)Displacement (fluid)MathematicsRevue Européenne des Éléments Finis
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Monte Carlo evaluation of kerma in an HDR brachytherapy bunker

2004

In recent years, the use of high dose rate (HDR) after-loader machines has greatly increased due to the shift from traditional Cs-137/Ir-192 low dose rate (LDR) to HDR brachytherapy. The method used to calculate the required concrete and, where appropriate, lead shielding in the door is based on analytical methods provided by documents published by the ICRP, the IAEA and the NCRP. The purpose of this study is to perform a more realistic kerma evaluation at the entrance maze door of an HDR bunker using the Monte Carlo code GEANT4. The Monte Carlo results were validated experimentally. The spectrum at the maze entrance door, obtained with Monte Carlo, has an average energy of about 110 keV, m…

Internationalitymedicine.medical_treatmentNuclear engineeringBrachytherapyPhysics::Medical PhysicsMonte Carlo methodBrachytherapyRadiation DosageRisk AssessmentKermaLead shieldingRadiation ProtectionRadiation MonitoringRisk FactorsOccupational ExposuremedicineScattering RadiationComputer SimulationHospital Design and ConstructionRadiology Nuclear Medicine and imagingMonte carlo evaluationLow dose rateSimulationPhysicsModels StatisticalRadiology Department HospitalRadiological and Ultrasound TechnologyMonte carlo codeDose rateMonte Carlo MethodPhysics in Medicine and Biology
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Anisotropy Influences on the Drug Delivery Mechanisms by Means of Joint Invariant Functions

2017

In the frame of Higuchi’s type functionality, this paper presents the anisotropy influences on the drug delivery mechanisms through the joint invariant functions to the simultaneous actions of the two SL(2R) isomorphic groups. Then, a new equation for drug delivery mechanism, independent of the type of polymer matrix and/or drug, is proposed.

Invariant functionArticle SubjectPolymersComputer scienceBiocompatible MaterialsNanotechnology02 engineering and technology010402 general chemistryTopologylcsh:Computer applications to medicine. Medical informaticsModels Biological01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyDiffusionMatrix (mathematics)Drug Delivery SystemsHumansComputer SimulationAnisotropyJoint (geology)General Immunology and MicrobiologyApplied MathematicsComputational BiologyMathematical ConceptsGeneral Medicine021001 nanoscience & nanotechnology0104 chemical sciencesModeling and SimulationDrug deliveryAnisotropylcsh:R858-859.70210 nano-technologyResearch ArticleComputational and Mathematical Methods in Medicine
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Tracking Ca

2019

We characterize thus-far elusive domain rearrangements of a calcium-transporting ATPase in the native membrane.

Ion TransportProtein ConformationBiophysicsQuantitative Structure-Activity RelationshipSciAdv r-articlesMolecular Dynamics SimulationCrystallography X-RaySarcoplasmic Reticulum Calcium-Transporting ATPasesKineticsStructural BiologyCalciumProtein Interaction Domains and MotifsResearch ArticlesProtein BindingResearch ArticleScience advances
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Mesoscopic organization in ionic liquids.

2017

We discuss some published results and provide new observations concerning the high level of structural complexity that lies behind the nanoscale correlations in ionic liquids (ILs) and their mixtures with molecular liquids. It turns out that this organization is a consequence of the hierarchical construction on both spatial (from ångström to several nanometer) and temporal (from fraction of picosecond to hundreds of nanosecond) scales, which requires joint use of experimental and computational tools. © 2017, Springer International Publishing Switzerland.

Ionic LiquidsNanotechnology02 engineering and technologyIonic liquidMolecular Dynamics Simulation010402 general chemistry01 natural sciencesMesoscopic and microscopic structurechemistry.chemical_compoundMolecular dynamicsX-ray and neutron scattering;Molecular dynamics simulation;Ionic liquid;Mesoscopic and microscopic structureAngstromNanoscopic scaleMesoscopic physicsChemistry (all)X-ray and neutron scatteringGeneral ChemistryNanosecond021001 nanoscience & nanotechnology0104 chemical sciencesIonic liquid; Mesoscopic and microscopic structure; Molecular dynamics simulation; X-ray and neutron scattering.chemistryChemical physicsPicosecondIonic liquid0210 nano-technologyTopics in current chemistry (Cham)
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Atoms, Photons and Entanglement for Quantum Information Technologies

2011

Atoms, Photons and Entanglement for Quantum Information Technologies Julio T. Barreiro a, Dieter Meschede b, Eugene Polzik c, E. Arimondo d, Fabrizio Illuminati e, Luigi Lugiato f a Institut fur Experimentalphysik, Universitat Innsbruck, Technikerstr. 25, 6020 Innsbruck, Austria b Institut fur Angewandte Physik, Universitat Bonn, Wegelerstr. 8, D-53115 Bonn, Germany c Niels Bohr Institute, Danish Quantum Optics Center QUANTOP, Copenhagen University, Blegdamsvej 17, 2100 Copenhagen, Denmark d Dipartimento di Fisica, Universita di Pisa, Lgo Buonarroti 3, I-56122 Pisa, Italy e Dipartimento di Matematica e Informatica, Universita degli Studi di Salerno, Via Ponte don Melillo, I-84084 Fisciano (…

IonsQuantum opticsAtomsPhotonsQuantum discordQuantum networkPhotonComputer scienceQuantum sensorCavity quantum electrodynamicsQuantum simulatorQuantum entanglementIonQuantum technologyOpen quantum systemQuantum computationAtomGeneral Earth and Planetary SciencesQuantum simulationQuantum EntanglementQuantum informationAmplitude damping channelHumanitiesGeneral Environmental ScienceQuantum computerProcedia Computer Science
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