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showing 10 items of 1641 documents

Bedrock and soil geochemistry influence the content of chemical elements in wild edible mushrooms (Morchella group) from South Italy (Sicily)

2019

Chemical elements in the samples of wild edible mushrooms of the <em>Morchella</em> group collected from different unpolluted Sicilian sites was analyzed by the ICP-MS (method) to detect the content of their minerals and determine whether soil geology and geochemistry can influence the chemical composition in fungi. Results showed that the mushroom samples mainly contained a high concentration of K and P and a wide variety of minor and trace elements (V, Mo, Pb, Ce, Cs, Zr), including heavy metals. Statistical analysis showed that the mushrooms differed in their content of minor and trace elements based on the geological/geographic site of origin. Comparison with other studies s…

mineral contentICP-MS analysisGeochemistryICP-MS analysiBioconcentrationPlant ScienceSettore BIO/01 - Botanica Generalesite geologyGroup (periodic table)Geographic siteChemical compositionlcsh:QH301-705.5Ecology Evolution Behavior and SystematicsMushroomgeographygeography.geographical_feature_categoryBedrockSettore BIO/02 - Botanica SistematicafungiMorchellalanguage.human_languagelcsh:Biology (General)languagefungiaccumulation factorSicilianActa Mycologica
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Case-specific performance of MM-PBSA, MM-GBSA, and SIE in virtual screening.

2015

In drug discovery the reliable prediction of binding free energies is of crucial importance. Methods that combine molecular mechanics force fields with continuum solvent models have become popular because of their high accuracy and relatively good computational efficiency. In this research we studied the performance of molecular mechanics generalized Born surface area (MM-GBSA), molecular mechanics Poisson-Boltzmann surface area (MM-PBSA), and solvated interaction energy (SIE) both in their virtual screening efficiency and their ability to predict experimentally determined binding affinities for five different protein targets. The protein-ligand complexes were derived with two different app…

molecular mechanics generalized Born surface areaPhosphodiesterase InhibitorsMolecular Dynamics Simulationta3111Molecular mechanicsMolecular Docking Simulationbeta-LactamasesMolecular dynamicssolvated interaction energyBacterial ProteinsComputational chemistryAldehyde ReductaseDrug DiscoveryMaterials ChemistryHumansHSP90 Heat-Shock ProteinsPhysical and Theoretical ChemistryBeta-Lactamase InhibitorsSpectroscopymolecular mechanics Poisson-Boltzmann surface areaMM-GBSAVirtual screeningBinding SitesChemistryPhosphoric Diester Hydrolasesta1182Hydrogen BondingInteraction energyvirtual screeningComputer Graphics and Computer-Aided DesignMolecular Docking SimulationMM-PBSAModels ChemicalROC CurveSolvent modelsDocking (molecular)Area Under CurveBiological systemReceptors Progesteronebeta-Lactamase InhibitorsHydrophobic and Hydrophilic InteractionsProtein BindingJournal of molecular graphicsmodelling
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Influence of Drilling Technique on the Radiographic, Thermographic, and Geomorphometric Effects of Dental Implant Drills and Osteotomy Site Preparati…

2020

The aim of this comparative study is to analyze the influence of drilling technique on the radiographic, thermographic, and geomorphometric effects of dental implant drills and osteotomy site preparations. One hundred and twenty osteotomy site preparations were performed on sixty epoxy resin samples using three unused dental implant drill systems and four drilling techniques performed with a random distribution into the following study groups: Group A: drilling technique performed at 800 rpm with irrigation (n = 30)

musculoskeletal diseasesOsteotomy siteCone beam computed tomographymedicine.medical_treatmentRadiographyeducationlcsh:MedicineOsteotomyArticle03 medical and health sciences0302 clinical medicineotorhinolaryngologic diseasesmedicineheat generationdrill coolingDental implantOrthodonticsDrillbusiness.industrylcsh:RDrilling030206 dentistryGeneral Medicinedental implants drillsequipment and supplieslow drilling speed030220 oncology & carcinogenesisHeat generationbusinessosteotomyJournal of Clinical Medicine
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IAP proteins as targets for drug development in oncology.

2013

The inhibitors of apoptosis (IAPs) constitute a family of proteins involved in the regulation of various cellular processes, including cell death, immune and inflammatory responses, cell proliferation, cell differentiation, and cell motility. There is accumulating evidence supporting IAP-targeting in tumors: IAPs regulate various cellular processes that contribute to tumor development, such as cell death, cell proliferation, and cell migration; their expression is increased in a number of human tumor samples, and IAP overexpression has been correlated with tumor growth, and poor prognosis or low response to treatment; and IAP expression can be rapidly induced in response to chemotherapy or …

musculoskeletal diseasesProgrammed cell deathCell growthbusiness.industryCellular differentiationapoptosisCell migrationReviewBioinformaticsbody regionsInternal ribosome entry siteImmune systemOncologyDrug developmentApoptosisCancer researchMedicinePharmacology (medical)Smac mimeticsbiological phenomena cell phenomena and immunitybusinessantitumor therapyOncoTargets and therapy
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The effects of post-translational processing on dystroglycan synthesis and trafficking1

2003

Dystroglycan is a component of the dystrophin glycoprotein complex that is cleaved into two polypeptides by an unidentified protease. To determine the role of post-translational processing on dystroglycan synthesis and trafficking we expressed the dystroglycan precursor and mutants thereof in a heterologous system. A point mutant in the processing site, S655A, prevented proteolytic cleavage but had no effect upon the surface localisation of dystroglycan. Mutation of two N-linked glycosylation sites that flank the cleavage site inhibited proteolytic processing of the precursor. Furthermore, chemical inhibition of N- and O-linked glycosylation interfered with the processing of the precursor a…

musculoskeletal diseasescongenital hereditary and neonatal diseases and abnormalitiesanimal structuresCOS cellsGlycosylationbiologyLactacystinBiophysicsCell Biologymusculoskeletal systemCleavage (embryo)BiochemistryDystroglycanschemistry.chemical_compoundchemistryBiochemistryStructural BiologyGeneticsbiology.proteinDystroglycanPikachurinBinding sitetissuesMolecular BiologyFEBS Letters
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In Vitro Study on Bone Heating during Drilling of the Implant Site: Material, Design and Wear of the Surgical Drill

2020

Objective: An in vitro study was made to compare mean thermal variation according to the material, design and wear of the surgical drills used during dental implant site preparation. Material and methods: Three study groups (stainless steel drills with straight blades

musculoskeletal diseaseswearMaterials sciencemedicine.medical_treatmentdesigneducationlcsh:TechnologyThermal variationArticledrilling03 medical and health sciences0302 clinical medicinestomatognathic systemotorhinolaryngologic diseasesmedicineIn vitro studyGeneral Materials Sciencelcsh:MicroscopyDental implantlcsh:QC120-168.85Orthodonticslcsh:QH201-278.5Drilllcsh:Tfungitechnology industry and agricultureDrilling030206 dentistrySurgical drillequipment and suppliesimplant sitelcsh:TA1-2040material030220 oncology & carcinogenesislcsh:Descriptive and experimental mechanicslcsh:Electrical engineering. Electronics. Nuclear engineeringImplantGradual increaselcsh:Engineering (General). Civil engineering (General)lcsh:TK1-9971bone heatingMaterials
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Comprehensive analysis of interacting proteins and genome-wide location studies of the Sas3-dependent NuA3 histone acetyltransferase complex

2014

Highlights • We characterise Sas3p and Gcn5p active HAT complexes in WT and deleted TAP-strains. • We confirm that Pdp3p interacts with NuA3, histones and chromatin regulators. • Pdp3p MS-analysis reveals its phosphorylation, ubiquitination and methylation. • Sas3p can substitute Gcn5p in acetylation of histone H3K14 but not of H3K9. • Genome-wide profiling of Sas3p supports its involvement in transcriptional elongation.

nt nucleotidePTM post-translational modificationNuA3 histone acetyltransferase complexChIP-on-chip chromatin immunoprecipitation with genome-wide location arraysBiologyArticleGeneral Biochemistry Genetics and Molecular BiologyChromatin remodelingHistonesHistone H3NuA3 nucleosomal acetyltransferase of histone H3Histone H1Histone H2APdp3TAP–MS strategyHistone codelcsh:QH301-705.5TAP tandem affinity purificationGeneticsRNAPII RNA polymerase IIHistone acetyltransferaseWCE whole cell extractSAGA Spt-Ada-Gcn acetyltransferaseWT wild-typeChromatinYeastCell biologyChIP-on-chiplcsh:Biology (General)Histone methyltransferasebiology.proteinHAT histone acetyltransferaseTSS transcription start siteFEBS Open Bio
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The role of SAXS and molecular simulations in 3D structure elucidation of a DNA aptamer against lung cancer

2021

Aptamers are short, single-stranded DNA or RNA oligonucleotide molecules that function as synthetic analogs of antibodies and bind to a target molecule with high specificity. Aptamer affinity entirely depends on its tertiary structure and charge distribution. Therefore, length and structure optimization are essential for increasing aptamer specificity and affinity. Here, we present a general optimization procedure for finding the most populated atomistic structures of DNA aptamers. Based on the existed aptamer LC-18 for lung adenocarcinoma, a new truncated LC-18 (LC-18t) aptamer LC-18t was developed. A three-dimensional (3D) shape of LC-18t was reported based on small-angle X-ray scattering…

oligonucleotideMolecular modelAptamer610RM1-950chemistry.chemical_compoundDrug DiscoveryA-DNAddc:610Binding siteOligonucleotideaptamerSAXSspatial structurelung adenocarcinomamolecular dynamicsProtein tertiary structurefragment molecular orbitalchemistrysmall-angle X-ray scatteringBiophysicsMolecular MedicineOriginal Articletertiary structureTherapeutics. Pharmacologymolecular simulationsDNAFragment molecular orbital
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Per un museo diffuso di arte contemporanea: il quartiere Eur a Roma. Frammenti di storia e paesaggio tra preesistenze archeologiche, architettura, ar…

2015

Abstract Obiettivi. Attraverso una lettura storico-artistica di alcuni manufatti collocati nel quartiere romano dell’Eur realizzati tra gli anni trenta e la fine degli anni novanta del Novecento, si vuole tracciare un percorso didattico, culturale e turistico che valorizzi il museo diffuso presente nel quartiere. Metodologia. La metodologia storico-artistica adottata comprende l’analisi del possibile Museo Diffuso analizzato rispetto al contesto spazio-temporale di realizzazione, il rapporto con la committenza, lo studio del profilo biografico e artistico degli autori coinvolti, il confronto con altre aree disciplinari. Risultati. L’intervento mira a tradurre i contributi scientifici sull’a…

open air museumtempo liberoheritage; open air museum; contemporary art; cultural studies; free time; archaeological sitecontemporary artheritageparco archeologicoarchaeological sitemuseo diffusoarte contemporaneacultural studieSettore L-ART/03 - Storia Dell'Arte Contemporaneapatrimoniopatrimonio; museo diffuso; arte contemporanea; cultural studies; tempo libero; parco archeologicofree time
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Recent progress in metal-organic frameworks (MOFs) for CO2 capture at different pressures

2022

Global climate change ensued by the rise in atmospheric CO2 levels is one of the greatest challenges our planet is facing today. This worldwide distress demands technologies that can contribute to our society toward “negative carbon emissions”. Carbon capture and storage (CCS) technologies are in in important role for capturing CO2 from existing emission sources, such as industrial and energy production point sources, before new more prominent modifications to the energy infrastructure can be implemented. Recently, alongside point source capture, direct air capture (DAC) processes have emerged as highly sought-after technologies that are able to capture CO2 from the ambient air. Alongside t…

open metal sitescarbon capturehiiliProcess Chemistry and Technologyflue gasadsorption mechanismchemisorptionPollutionamine-functionalizedadsorbenthybrid ultra-microporous materialsphysisorptiondirect air captureregenerationChemical Engineering (miscellaneous)savukaasutadsorptiometal-organic frameworkshiilidioksidin talteenotto ja varastointiWaste Management and DisposalJournal of Environmental Chemical Engineering
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