Search results for " Stab"

showing 10 items of 1773 documents

RNA uridylation and decay in plants

2018

RNA uridylation consists of the untemplated addition of uridines at the 3′ extremity of an RNA molecule. RNA uridylation is catalysed by terminal uridylyltransferases (TUTases), which form a subgroup of the terminal nucleotidyltransferase family, to which poly(A) polymerases also belong. The key role of RNA uridylation is to regulate RNA degradation in a variety of eukaryotes, including fission yeast, plants and animals. In plants, RNA uridylation has been mostly studied in two model species, the green algae Chlamydomonas reinhardtii and the flowering plant Arabidopsis thaliana . Plant TUTases target a variety of RNA substrates, differing in size and function. These RNA substrates include …

0106 biological sciences0301 basic medicineSmall interfering RNATerminal nucleotidyltransferaseRNA StabilitymRNAArabidopsisChlamydomonas reinhardtiiUridylationBiology01 natural sciencesRNA decayGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesRNA degradationSettore AGR/07 - Genetica AgrariamicroRNAGene silencing[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyUridineComputingMilieux_MISCELLANEOUSPolymerase2. Zero hungerMessenger RNABiochemistry Genetics and Molecular Biology (all)fungiRNAfood and beverages[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyArticlesPlantsRibosomal RNAbiology.organism_classificationCell biology030104 developmental biologyAgricultural and Biological Sciences (all)biology.proteinRNARNA InterferenceGeneral Agricultural and Biological SciencesChlamydomonas reinhardtii010606 plant biology & botany
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Cryptogams signify key transitions of bacteria and fungi in Arctic sand dune succession.

2020

•Primary succession models focus on aboveground vascular plants. However, the prevalence of mosses and lichens, i.e. cryptogams, suggests they play a role in soil successions. Here, we explore whether effects of cryptogams on belowground microbes can facilitate progressive shifts in sand dune succession. •We linked aboveground vegetation, belowground bacterial and fungal communities, and soil chemical properties in six successional stages in Arctic inland sand dunes: bare sand, grass, moss, lichen, ericoid heath and mountain birch forest. •Compared to the bare sand and grass stages, microbial biomass and the proportion of fungi increased in the moss stage, and later stage microbial groups a…

0106 biological sciences0301 basic medicineVascular planteroosioPhysiologyPolytrichumArctic soilPlant ScienceEcological succession01 natural sciencesbacterial communitySand dune stabilizationbakteeritkarhunsammalet03 medical and health sciencesSoilSandDominance (ecology)LichenitiökasvitPrimary successionEcosystemSoil Microbiologymaaperäarktinen aluebiologyBacteriaEcologyprimary successionArctic RegionsfungiFungifood and beverages15. Life on landCryptogambiology.organism_classificationerosion030104 developmental biologyPolytrichumfungal communitysand dunesienetcryptogam010606 plant biology & botanyThe New phytologistReferences
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Technical Note on the quality of DNA sequencing for the molecular characterisation of genetically modified plants

2018

Abstract As part of the risk assessment (RA) requirements for genetically modified (GM) plants, according to Regulation (EU) No 503/2013 and the EFSA guidance on the RA of food and feed from GM plants (EFSA GMO Panel, 2011), applicants need to perform a molecular characterisation of the DNA sequences inserted in the GM plant genome. The European Commission has mandated EFSA to develop a technical note to the applicants on, and checking of, the quality of the methodology, analysis and reporting covering complete sequencing of the insert and flanking regions, insertion site analysis of the GM event, and generational stability and integrity. This Technical Note puts together requirements and r…

0106 biological sciences0301 basic medicineVeterinary (miscellaneous)[SDV]Life Sciences [q-bio]2405 Parasitologymolecularcharacterisationnext‐generation sequencingContext (language use)Plant ScienceComputational biologyGenetically modified cropsBiology01 natural sciencesMicrobiologyGenomeInsert (molecular biology)DNA sequencing03 medical and health sciencessymbols.namesake1110 Plant Sciencegenetically modified organismgenetic stabilityDNA sequencing1106 Food ScienceSanger sequencinggenetically modified organisms2404 Microbiologyrisk assessmentmolecular characterisation10079 Institute of Veterinary Pharmacology and ToxicologyGenetically modified organism3401 Veterinary (miscellaneous)Scientific Opinion030104 developmental biologyNGSsymbols570 Life sciences; biologyAnimal Science and ZoologyParasitologynext-generation sequencing1103 Animal Science and Zoology010606 plant biology & botanyFood ScienceVerification and validation
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Species’ ecological functionality alters the outcome of fish stocking success predicted by a food-web model

2018

Fish stocking is used worldwide in conservation and management, but its effects on food-web dynamics and ecosystem stability are poorly known. To better understand these effects and predict the outcomes of stocking, we used an empirically validated network model of a well-studied lake ecosystem. We simulate two stocking scenarios with two native fish species valuable for fishing. In the first scenario, we stock planktivorous fish (whitefish) larvae in the ecosystem. This leads to a 1% increase in adult whitefish biomasses and decreases the biomasses of the top predator (perch). In the second scenario, we also stock perch larvae in the ecosystem. This decreases the planktivorous whitefish an…

0106 biological sciences0301 basic medicinekalanistutus010603 evolutionary biology01 natural sciencesekosysteemit03 medical and health sciencesStockingfish stockingFish stockingEcosystem14. Life underwaterlcsh:ScienceApex predatorEcological stabilityPerchMultidisciplinaryecosystem stabilitybiologyEcologykalakannatfeeding interactionsLake ecosystemvesiekosysteemitbiology.organism_classificationfood-web dynamicsFood webekosysteemit (ekologia)030104 developmental biologyallometric trophic network modelta1181lcsh:QravintoverkotRoyal Society Open Science
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Spatial variability of soft-bottom macrobenthic communities in northern Sicily (Western Mediterranean): Contrasting trawled vs. untrawled areas

2016

13 páginas, 9 tablas, 5 figuras

0106 biological sciencesAquatic OrganismsStable isotope analysisTrawling impactFisheriesBenthic communitieAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesBenthosBenthic communitiesDominance (ecology)AnimalsFishery exclusion zoneSpatial closureSicilySpatial closuresEcosystemTrophic levelIsotope analysisBenthic communities Continental shelf Trawling impact Fishery exclusion zones Spatial closures Stable isotope analysisStable isotope analysiEcologyTrawling010604 marine biology & hydrobiologyFishery exclusion zones;Stable isotope analysis;Continental shelf;Spatial closures;Benthic communities;Trawling impactFishery exclusion zonesGeneral Medicineδ15NBiodiversityPollutionInvertebratesFood webFisheryGeographyBenthic zoneContinental shelfEnvironmental Monitoring
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A niche perspective on the range expansion of symbionts.

2020

Range expansion results from complex eco-evolutionary processes where range dynamics and niche shifts interact in a novel physical space and/or environment, with scale playing a major role. Obligate symbionts (i.e. organisms permanently living on hosts) differ from free-living organisms in that they depend on strong biotic interactions with their hosts which alter their niche and spatial dynamics. A symbiotic lifestyle modifies organism–environment relationships across levels of organisation, from individuals to geographical ranges. These changes influence how symbionts experience colonisation and, by extension, range expansion. Here, we investigate the potential implications of a symbiotic…

0106 biological sciencesBiotopeRange (biology)Enemy releaseNichePhoresyMetapopulationBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyHost-Parasite Interactions03 medical and health sciencesHost switchingAnimalsSymbiosisEcosystem030304 developmental biologyDemography0303 health sciencesObligateHost (biology)EcologyBiological EvolutionNiche constructionSymbiont organisation levelsEcological fittingBiological dispersalMetapopulationNiche constructionEnvironmental stabilityGeneral Agricultural and Biological SciencesEcological fittingColonisation processBiological reviews of the Cambridge Philosophical SocietyXII. REFERENCES
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From clear lakes to murky waters – tracing the functional response of high-latitude lake communities to concurrent ‘greening’ and ‘browning’

2019

Climate change and the intensification of land use practices are causing widespread eutrophication of subarctic lakes. The implications of this rapid change for lake ecosystem function remain poorly understood. To assess how freshwater communities respond to such profound changes in their habitat and resource availability, we conducted a space-for-time analysis of food-web structure in 30 lakes situated across a temperature-productivity gradient equivalent to the predicted future climate of subarctic Europe (temperature +3 degrees C, precipitation +30% and nutrient +45 mu g L-1 total phosphorus). Along this gradient, we observed an increase in the assimilation of pelagic-derived carbon from…

0106 biological sciencesDYNAMICSIMPACTSFood Chainecological stable statesClimate ChangeTROPHIC POSITION010603 evolutionary biology01 natural sciencesjärvetspace-for-time114 Physical sciencesFISHhabitat couplingstable isotope analysisVDP::Mathematics and natural scienses: 400::Zoology and botany: 480FOR-TIME SUBSTITUTIONSPACEEcosystem14. Life underwaterHABITATEcology Evolution Behavior and SystematicsEcosystemIsotope analysisTrophic levelCLIMATE-CHANGEEcology010604 marine biology & hydrobiologyrehevöityminencryptic energetic pathwaysLake ecosystemSHIFTSPelagic zoneeliöyhteisöt15. Life on landSubarctic climateFood webEuropetrophic nicheLakes13. Climate actionBenthic zoneVDP::Matematikk og naturvitenskap: 400::Zoologiske og botaniske fag: 4801181 Ecology evolutionary biologyEnvironmental scienceta1181FOOD-WEBympäristönmuutoksetravintoverkot
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Halophila stipulacea descriptors in the native area (Red Sea): A baseline for future comparisons with native and non-native populations

2018

Abstract Halophila stipulacea is a small tropical seagrass species native to the Red Sea. Due to its invasive character, there is growing interest in understanding its ability to thrive in a broad range of ecological niches. We studied temporal (February 2014 and July 2014), depth (5, 9, 18 m) and spatial (NB and SB) related dynamics of H. stipulacea meadows in the northern Gulf of Aqaba. We evaluated changes in density, morphometry, biomass, and biochemical parameters alongside the reproductive effort. In both sites, maximal growth and vegetative performance occurred in the summer with a marked increase of 35% in shoot density and 18% in biomass; PAR reduction with season and depth induced…

0106 biological sciencesDepth-adaptationSettore BIO/07 - EcologiaSettore BIO/07Range (biology)Anthropogenic pressuresPhenol contentAquatic ScienceSeagrass Temporal changes Depth-adaptation Anthropogenic pressures Morphometric and population parameters Phenol content Nitrogen storage Stable isotopesOceanography010603 evolutionary biology01 natural sciencesMorphometric and population parametersNitrogen storageSeagrassStable isotopesEcological nicheHalophila stipulaceaBiomass (ecology)biologyEcology010604 marine biology & hydrobiologyBaseline (sea)food and beveragesTemporal changesGeneral Medicinebiology.organism_classificationPollutionSexual reproductionSeagrassShoot
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The relation between circadian asynchrony, functional redundancy, and trophic performance in tropical ant communities

2016

The diversity-stability relationship has been under intense scrutiny for the past decades, and temporal asynchrony is recognized as an important aspect of ecosystem stability. In contrast to relatively well-studied interannual and seasonal asynchrony, few studies investigate the role of circadian cycles for ecosystem stability. Here, we studied multifunctional redundancy of diurnal and nocturnal ant communities in four tropical rain forest sites. We analyzed how it was influenced by species richness, functional performance, and circadian asynchrony. In two neotropical sites, species richness and functional redundancy were lower at night. In contrast, these parameters did not differ in the t…

0106 biological sciencesEcological stabilityTropical ClimateFood ChainRainforestAntsEcology010604 marine biology & hydrobiologyBiodiversityBiodiversityBiology010603 evolutionary biology01 natural sciencesCircadian RhythmFrench GuianaHabitatBorneoRedundancy (engineering)AnimalsEcosystemCircadian rhythmSpecies richnessEcology Evolution Behavior and SystematicsTrophic levelEcology
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Size-dependent predation of the mesopredator Marthasterias glacialis (L.) (Asteroidea)

2016

Asteroids are largely recognized as important predators in all of the world’s oceans and for this reason, they play a crucial role in shaping the structure and functioning of benthic ecosystems. The spiny starfish Marthasterias glacialis is generally considered a voracious predator of molluscs, in particular bivalves. Using field observations and carbon (δ13C) and nitrogen (δ15N) stable isotopes, we explored possible changes in diet in relation to size of M. glacialis. Data were collected at Ustica Island (Southern Tyrrhenian Sea) from June 2008 to June 2010. M. glacialis showed a size shift in feeding preferences due to different use of food items: bivalves, Columbella rustica, Euthria cor…

0106 biological sciencesEcologybiologyEcology010604 marine biology & hydrobiologyStarfishAquatic Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesColumbella rusticaAsteroids feeding preference stable isotope sea urchinsParacentrotus lividusPredationBenthic zoneMarthasteriasTrochoidea (genus)Arbacia lixulaEcology Evolution Behavior and SystematicsMarine Biology
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