Search results for " Two-Dimensional"

showing 10 items of 116 documents

Stress-70 proteins in marine mussel Mytilus galloprovincialis as biomarkers of environmental pollution: a field study.

2004

In the present work we have investigated levels of stress-70 proteins in the gills of mussel Mytilus galloprovincialis collected seasonally from subtidal rocky shores at 6 different sites of the Rovinj coastal area (Northern Adriatic, Croatia). 1-D analysis (SDS-PAGE) using monoclonal mouse antibodies anti-HSP70 detected two bands of stress-70 proteins, 70 and 72 kDa constitutively present during the year. 2-D analysis (IEF+SDS-PAGE) proved that the antibodies used detected HSP70 (pI 5.7–5.9) and HSP72 (pI 5.5–5.6). The quantification of stress-70 proteins was possible using 200 ng of external HSP70 protein standard included on every blot. Maximal levels of HSP72 and HSP70 were observed in …

Gillanimal structuresImmunoblottingZoologyEnvironmental pollutionAcclimatizationMediterranean seaMediterranean SeaAnimalsElectrophoresis Gel Two-DimensionalHSP70 Heat-Shock ProteinsMolluscalcsh:Environmental sciencesGeneral Environmental Sciencelcsh:GE1-350Analysis of VariancebiologyEcologyfungiTemperatureHeat shock proteins; Mytilus galloprovincialis; Stress-70 proteins; HSP70; HSP72; Environmental pollutionMusselbiology.organism_classificationBivalviaMytilusBivalviaElectrophoresis Polyacrylamide GelSeasonsEnvironmental PollutionBiomarkersDensitometryEnvironmental MonitoringEnvironment international
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Biodegradation Potential of Oil-degrading Bacteria Related to the Genus Thalassospira Isolated from Polluted Coastal Area in Mediterranean Sea

2021

Three bacterial species related to the genus Thalassospira (T. lucentensis, T. xianhensis and T. profundimaris), isolated from polluted sediment and seawater samples collected from Priolo Bay (eastern coast of Sicily, Ionian Sea), were analyzed for their biotechnological potential. For this purpose, the presence of specific catabolic genes associated to aliphatic and aromatic hydrocarbon metabolism, the production of biosurfactants and emulsification activity, the capability to degrade oil-derived linear, branched, cyclic alkanes, and polycyclic aromatic hydrocarbons (PAHs) were evaluated. Alkane hydroxylase gene (alkano-monoxygenase alkb and citocrome P450) were present in genome of all st…

Health Toxicology and MutagenesisThalassospiraSoil ScienceMarine oil pollutionSettore BIO/19 - Microbiologia GeneraleMarine oil pollutionbiosurfactantsMediterranean seaemulsification activitybiodegradation of hydrocarbonsEnvironmental Chemistrybiodegradation of hydrocarbons; biosurfactants; Comprehensive two-dimensional gas chromatography; emulsification activity; Marine oil pollution; Thalassospirabiodegradation of hydrocarbonbiologySedimentbiosurfactantBiodegradationbiology.organism_classificationPollutionComprehensive twodimensional gas chromatographyEnvironmental chemistryEnvironmental scienceSeawaterGenus ThalassospiraBayBacteriaComprehensive two-dimensional gas chromatography
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Evolution of tissue-specific keratins as deduced from novel cDNA sequences of the lungfish Protopterus aethiopicus.

2005

Lungfishes are possibly the closest extant relatives of the land vertebrates (tetrapods). We report here the cDNA and predicted amino acid sequences of 13 different keratins (ten type I and three type II) of the lungfish Protopterus aethiopicus. These keratins include the orthologs of human K8 and K18. The lungfish keratins were also identified in tissue extracts using two-dimensional polyacrylamide gel electrophoresis, keratin blot binding assays and immunoblotting. The identified keratin spots were analyzed by peptide mass fingerprinting which assigned seven sequences (inclusively Protopterus K8 and K18) to their respective protein spot. The peptide mass fingerprints also revealed the fac…

HistologyDNA ComplementaryMolecular Sequence DataFluorescent Antibody Techniquemacromolecular substancesPeptide MappingPathology and Forensic MedicineEvolution MolecularPeptide mass fingerprintingComplementary DNAKeratinAnimalsElectrophoresis Gel Two-DimensionalAmino Acid SequencePolyacrylamide gel electrophoresisLungfishchemistry.chemical_classificationProtopterusintegumentary systembiologyPhylogenetic treeLampreyFishesCell BiologyGeneral MedicineAnatomybiology.organism_classificationchemistryEvolutionary biologySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationKeratinsEuropean journal of cell biology
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Complete coding nucleotide sequence of cDNA for the class II RT1.B beta I chain of the Lewis rat.

1991

We have established the first full length cDNA clone for the beta light chain of the MHC class II alpha, beta heterodimer (isotype RT1.B) of the rat. Clone pLR beta 118 was obtained from a self-primed lambda gt10 cDNA library of IFN-tau treated bone marrow-derived macrophages of the Lewis rat. Subcloning of pLR beta 118 into a transcription vector with subsequent in vitro transcription and translation using the reticulocyte lysate system in the presence of microsomes followed by immunoprecipitation with mAb OX6 and two-dimensional gel electrophoresis revealed the intact RT1.B beta I-chain.

ImmunoprecipitationMolecular Sequence DataBiophysicsBone Marrow CellsBiologyImmunoglobulin light chainTransfectionBiochemistryReticulocyteStructural BiologyTranscription (biology)Complementary DNAHistocompatibility AntigensGeneticsmedicineAnimalsElectrophoresis Gel Two-DimensionalAmino Acid SequenceCells CulturedBase SequencecDNA libraryMacrophagesNucleic acid sequenceDNAExonsMolecular biologyRatsmedicine.anatomical_structureSubcloningRats Inbred LewBiochimica et biophysica acta
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Cell surface display of rat invariant γ chain: detection by monoclonal antibodies directed against a C-terminal γ chain segment

1992

A series of 14 monoclonal antibodies (mAb) directed against the C-terminal part of the rat invariant gamma chain (amino acid 142-216) was generated using distinct fusion proteins that contain this gamma segment for immunization and hybridoma screening. Additional fusion protein were prepared carrying discrete regions of the gamma chain. Employing these reagents confirmed that the obtained mAb do indeed recognize the C-terminal portion of the invariant chain, as demonstrated by Western blot analysis. All mAb established recognize epitopes present on the native gamma chain, as revealed by immunoprecipitation analysis using nonionic detergent extracts of metabolically labeled Lewis rat splenoc…

Immunoprecipitationmedicine.drug_classRecombinant Fusion ProteinsBlotting WesternGenetic VectorsImmunologyMonoclonal antibodyEpitopeMiceWestern blotEscherichia colimedicineAnimalsImmunology and AllergyElectrophoresis Gel Two-DimensionalCloning MolecularGel electrophoresisMice Inbred BALB CHybridomasbiologymedicine.diagnostic_testHistocompatibility Antigens Class IIAntibodies MonoclonalFlow CytometryFusion proteinPrimary and secondary antibodiesMolecular biologyRatsAntigens Differentiation B-LymphocyteBiochemistryRats Inbred LewAntigens Surfacebiology.proteinAntibodySpleenPlasmidsEuropean Journal of Immunology
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Combining Hexanoic Acid Plant Priming with Bacillus thuringiensis Insecticidal Activity against Colorado Potato Beetle

2013

Interaction between insect herbivores and host plants can be modulated by endogenous and exogenous compounds present in the source of food and might be successfully exploited in Colorado potato beetle (CPB) pest management. Feeding tests with CPB larvae reared on three solanaceous plants (potato, eggplant and tomato) resulted in variable larval growth rates and differential susceptibility to Bacillus thuringiensis Cry3Aa toxin as a function of the host plant. An inverse correlation with toxicity was observed in Cry3Aa proteolytic patterns generated by CPB midgut brush-border membrane vesicles (BBMV) from Solanaceae-fed larvae, being the toxin most extensively proteolyzed on potato, followed…

Insecticidesmedicine.disease_causeMass Spectrometrylcsh:Chemistrychemistry.chemical_compoundHemolysin ProteinsPlant Growth RegulatorsCysteine ProteasesBacillus thuringiensisPlant defense against herbivoryColorado potato beetleElectrophoresis Gel Two-Dimensionallcsh:QH301-705.5SpectroscopySolanaceaeHexanoic acidbiologyfood and beveragesGeneral MedicineComputer Science ApplicationsColeopterasurgical procedures operativeBiochemistryLarvaHost-Pathogen Interactionsplant hormonesInsect ProteinsSolanaceaeproteolysisColoradoMolecular Sequence DataBacillus thuringiensisCatalysisArticleMicrobiologyCry3Aa toxinInorganic Chemistryintestain proteasesBacterial Proteinsplant defensemedicineAnimalsAmino Acid SequencePhysical and Theoretical ChemistryprimingMolecular BiologyCaproatesSolanum tuberosumBacillus thuringiensis ToxinsToxinOrganic ChemistryColorado potato beetlefungiBody WeightMidgutColorado potato beetle;<i> Bacillus thuringiensis</i>; Cry3Aa toxin; intestain proteases; proteolysis; Solanaceae; hexanoic acid; priming; plant defense; plant hormonesFeeding Behaviorbiology.organism_classificationDietEndotoxinsPapainchemistrylcsh:Biology (General)lcsh:QD1-999hexanoic acidPeptidesDigestive SystemSequence AlignmentInternational Journal of Molecular Sciences
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Changes in the protein profile of Quercus ilex leaves in response to drought stress and recovery

2009

To characterize the molecular response of holm oak to drought stress and its capacity to recover 9-month-old Quercus ilex seedlings were subjected to three treatments for a 14-d period: (i) continuous watering to field capacity (control plants, W), (ii) no irrigation (drought treatment, D), and (iii) no irrigation for 7d followed by a watering period of 7d (recovery treatment, R). In drought plants, leaf water potential decreased from -0.72 (day 0) to -0.99MPa (day 7), and -1.50MPa (day 14). Shoot relative water content decreased from 49.3% (day 0) to 47.7% (day 7) and 40.8% (day 14). Photosystem II quantum yield decreased from 0.80 (day 0) to 0.72 (day 7) and 0.73 (day 14). Plants subjecte…

IrrigationPhotosystem IIPhysiologyProtein Array AnalysisPlant SciencePhotosynthesisField capacityQuercusStress PhysiologicalXylemBotanyElectrophoresis Gel Two-DimensionalWater contentPlant ProteinsbiologyfungiPhotosystem II Protein ComplexWaterfood and beveragesPlant physiologybiology.organism_classificationDroughtsFagaceaePlant LeavesHorticultureShootAgronomy and Crop ScienceJournal of Plant Physiology
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Onco-fetal/laminin-binding collagen from colon carcinoma: detection of new sequences.

1995

We have recently identified an oncofetal-laminin binding collagen (OF/LB) composed of three alpha chains, with the apparent molecular mass of about 100 kDa each, but bearing different pI. One of the chains appears markedly acidic in a bidimensional electrophoretic system, where the NEPHGE is used as first dimension separating gel, while the two more basic chains have similar migration as alpha 1(III) and alpha 1(I) collagen chains, respectively. Sequence analyses have been performed on CNBr-peptides, derived from pepsinized triple helical molecules and on tryptic fragments obtained after in gel digestion of the acidic band. The research of sequence homology with computerized databases indic…

Macromolecular SubstancesBiopsyMolecular Sequence DataBiophysicsSequence (biology)In-gel digestionBiochemistryMoleculeHumansElectrophoresis Gel Two-DimensionalTrypsinAmino Acid SequenceCyanogen BromideLaminin bindingMolecular BiologyGeneChromatography High Pressure LiquidFetusMolecular massSequence Homology Amino AcidChemistryCell BiologyMolecular biologyPeptide FragmentsElectrophoresisBiochemistryColonic NeoplasmsCollagenBiochemical and biophysical research communications
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Genes coding for intermediate filament proteins closely related to the hagfish "thread keratins (TK)" alpha and gamma also exist in lamprey, teleosts…

2005

The "thread keratins (TK)" alpha and gamma so far have been considered highly specialized intermediate filament (IF) proteins restricted to hagfish. From lamprey, we now have sequenced five novel IF proteins closely related to TKalpha and TKgamma, respectively. Moreover, we have detected corresponding sequences in EST and genomic databases of teleosts and amphibians. The structure of the TKalpha genes and the positions of their deduced amino acid sequences in a phylogenetic tree clearly support their classification as type II keratins. The genes encoding TKgamma show a structure typical for type III IF proteins, whereas their positions in phylogenetic trees favor a close relationship to the…

MaleBranchiostomaDNA ComplementaryLanceletXenopusMolecular Sequence DataAmphibiansIntermediate Filament Proteinsbiology.animalKeratinAnimalsProtein IsoformsElectrophoresis Gel Two-DimensionalAmino Acid SequenceIntermediate filamentGenePhylogenyZebrafishchemistry.chemical_classificationintegumentary systembiologyPhylogenetic treeSequence Homology Amino AcidEcologyLampreyGene Expression ProfilingFishesGene Expression Regulation DevelopmentalLampreysCell BiologyExonsSequence Analysis DNAbiology.organism_classificationIntronschemistryEvolutionary biologyKeratinsFemaleHagfishesHagfishExperimental cell research
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Intermediate filament protein profiles of human testicular non-seminomatous germ cell tumors: correlation of cytokeratin synthesis to cell differenti…

1991

Abstract The patterns of cytoskeletal differentiation were studied in 20 testicular non-seminomatous germ cell tumors by immunohistochemistry, using diverse monoclonal antibodies specific for different intermediate filament (IF) proteins and for desmoplakin. Immuno-fluorescence and immunoperoxidase methods on both formalin-fixed and frozen tissues were applied, in some cases together with a gel electrophoretic analysis of IF proteins. The tumors examined included embryonal carcinoma (EC), endodermal sinus tumor (EST), choriocar-cinoma and teratoma. Nine of the tumors were composed of only one histological type, the others showed mixed components. Cytokeratins 8 and 18 were identified in all…

MaleCancer ResearchPathologymedicine.medical_specialtyCellular differentiationFluorescent Antibody TechniqueVimentinBiologyEmbryonal carcinomaCytokeratinIntermediate Filament ProteinsTesticular NeoplasmsMesonephromamedicineHumansElectrophoresis Gel Two-DimensionalChoriocarcinomaIntermediate filamentMolecular BiologyTeratomaCell DifferentiationDesmosomesCell BiologyEndodermal sinus tumormedicine.diseaseImmunologybiology.proteinKeratinsTeratomaGerm cell tumorsDevelopmental BiologyDifferentiation
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