Search results for " computing"

Modular Breath Analyzer (MBA): Introduction of a Breath Analyzer Platform Based on an Innovative and Unique, Modular eNose Concept for Breath Diagnos…

2021

Exhaled breath analysis for early disease detection may provide a convenient method for painless and non-invasive diagnosis. In this work, a novel, compact and easy-to-use breath analyzer platform with a modular sensing chamber and direct breath sampling unit is presented. The developed analyzer system comprises a compact, low volume, temperature-controlled sensing chamber in three modules that can host any type of resistive gas sensor arrays. Furthermore, in this study three modular breath analyzers are explicitly tested for reproducibility in a real-life breath analysis experiment with several calibration transfer (CT) techniques using transfer samples from the experiment. The experiment …

A Solution to the Problem of the Maximal Number of Symbols for Biomolecular Computer

2019

The authors present a solution to the problem of generating the maximum possible number of symbols for a biomolecular computer using restriction enzyme BbvI and ligase as the hardware, and transition molecules built of double-stranded DNA as the software. The presented solution offers an answer to the open question, in the algorithm form, of the maximal number of symbols for a biomolecular computer that makes use of the restriction enzyme BbvI.

PUNAS: A Parallel Ungapped-Alignment-Featured Seed Verification Algorithm for Next-Generation Sequencing Read Alignment

2017

The progress of next-generation sequencing has a major impact on medical and genomic research. This technology can now produce billions of short DNA fragments (reads) in a single run. One of the most demanding computational problems used by almost every sequencing pipeline is short-read alignment; i.e. determining where each fragment originated from in the original genome. Most current solutions are based on a seed-and-extend approach, where promising candidate regions (seeds) are first identified and subsequently extended in order to verify whether a full high-scoring alignment actually exists in the vicinity of each seed. Seed verification is the main bottleneck in many state-of-the-art a…

Administrator danych osobowych i przetwarzający dane na zlecenie a chmura obliczeniowa - problemy interpretacyjne

2016

Semantic place recognition for context aware services

2012

Extracting the meaning of the most significant places, which are frequently visited by a mobile user, is a relevant problem in mobile computing. Predicting semantic meaning of such places is useful in many areas. The problem of place semantic annotation of a user location can be challenging for service providers. Awareness of user activities is very important for development of personalized applications, which can be used in health care systems, living systems, etc. Predicting location of mobile users not only enables development of high quality location-based services and applications, but also improves resource reservation in wireless networks. In this research several solutions for seman…

Costs of Using Hybrid Cloud Infrastructure: Towards a General Framework

2012

Cloud computing infrastructure is a state-of-the-art computing as a utility paradigm, offering individuals and organizations instantly-available and scalable computing capacity. Organizations may deploy the cloud infrastructure in own data centers, as a private cloud, or use the public on-demand cloud infrastructure charged on a pay-per-use basis. The organizations may also adopt a hybrid solution, i.e. use public cloud capacity to complement the resources in the private cloud, e.g. during the periods of rapid growth in the demand. One of the important factors that affect the organizations’ decisions to adopt a hybrid cloud is the total cost of acquiring and managing the infrastructure. In …

Dynamic aspects of industrial middleware architectures

2011

A gearbox model for processing large volumes of data by using pipeline systems encapsulated into virtual containers

2020

Software pipelines enable organizations to chain applications for adding value to contents (e.g., confidentially, reliability, and integrity) before either sharing them with partners or sending them to the cloud. However, the pipeline components add overhead when processing large volumes of data, which can become critical in real-world scenarios. This paper presents a gearbox model for processing large volumes of data by using pipeline systems encapsulated into virtual containers. In this model, the gears represent applications, whereas gearboxes represent software pipelines. This model was implemented as a collaborative system that automatically performs Gear up (by using parallel patterns…

Financial aspects of business models : reducing costs and increasing revenues in a cloud context

2018

The emergence of cloud computing induces opportunities for software vendors and for organizations with great storage needs. Indeed, software companies have begun to adopt cloud technologies and offer their software as a service to customers instead of selling software products. As a result, their revenue models have changed, and the diversity and complexity of the resulting pricing models have created both opportunities and impediments to competition in the market. On the other hand, due to the exponentially growing volume of digital content, organizations have an increasing demand for storage and need to choose between private, public, and hybrid storage solutions. This decision requires c…

GPU accelerated Monte Carlo simulations of lattice spin models

2011

We consider Monte Carlo simulations of classical spin models of statistical mechanics using the massively parallel architecture provided by graphics processing units (GPUs). We discuss simulations of models with discrete and continuous variables, and using an array of algorithms ranging from single-spin flip Metropolis updates over cluster algorithms to multicanonical and Wang-Landau techniques to judge the scope and limitations of GPU accelerated computation in this field. For most simulations discussed, we find significant speed-ups by two to three orders of magnitude as compared to single-threaded CPU implementations.