Search results for " diversity"

Interspecific interactions influence contrasting spatial genetic structures in two closely related damselfly species

2014

Spatial genetic structure (SGS) is largely determined by colonization history, landscape and ecological characteristics of the species. Therefore, sympatric and ecologically similar species are expected to exhibit similar SGSs, potentially enabling prediction of the SGS of one species from that of another. On the other hand, due to interspecific interactions, ecologically similar species could have different SGSs. We explored the SGSs of the closely related Calopteryx splendens and Calopteryx virgo within Finland and related the genetic patterns to characteristics of the sampling localities. We observed different SGSs for the two species. Genetic differentiation even within short distances …

Analysis of plant diversity with retrotransposon-based molecular markers

2010

Retrotransposons are both major generators of genetic diversity and tools for detecting the genomic changes associated with their activity because they create large and stable insertions in the genome. After the demonstration that retrotransposons are ubiquitous, active and abundant in plant genomes, various marker systems were developed to exploit polymorphisms in retrotransposon insertion patterns. These have found applications ranging from the mapping of genes responsible for particular traits and the management of backcrossing programs to analysis of population structure and diversity of wild species. This review provides an insight into the spectrum of retrotransposon-based marker syst…

2019

The Apennine Mountains in Italy are an important biogeographical region and of particular interest in phylogeographical research, because they have been a refugium during Pleistocene glaciation events for numerous European species. We performed a genetic study on the Eurasian bark beetle Pityogenes chalcographus (Linnaeus, 1760), focusing on two Apennine (Italian) and two Central European (Austrian) locations to assess the influence of the Apennines in the evolutionary history of the beetle, particularly during the Pleistocene. We analysed a part of the mitochondrial COI gene and a set of 5470 informative genome-wide markers to understand its biogeography. We found 75 distinct mitochondrial…

Impact of genetic diversity of an earthworm on decomposition and ecosystem functioning

2020

Abstract Ecosystem functioning is affected positively by increased biodiversity, through complementary functions of multiple species or because high-functioning species are more likely in a species-rich community. Genetic diversity is one level of biodiversity that has been shown to positively affect ecosystem functioning. Whether the genetic diversity of a key decomposer species affects decomposition processes, and ecosystem functioning in general, is still unknown. We compared low and high genetic diversity assemblages of the earthworm Dendrobaena octaedra in two different experiments: using microcosms containing a simple community of other decomposer animals (some nematodes and other mic…

Genetic diversity of fig (Ficus caricaL.) genotypes grown in Southern Italy revealed by the use of SSR markers

2017

The genetic variability among 181 fig (Ficus carica L.) accessions found in small farms located in Campania, Basilicata, Apulia, Calabria and Sicily was investigated analysing the polymorphism of 18 simple sequence repeat (SSR) markers. The SSR analysis revealed a large genetic diversity among accessions. A total of 117 alleles were detected with a mean of 6.5 locus-1. The average expected (He) and observed heterozygosity (Ho) were 0.56 and 0.66, respectively. The mean polymorphic information content (PIC) was 0.51, suggesting a significant molecular diversity among the fig accessions taken into consideration. The UPGMA cluster analysis discriminated 174 genotypes and allowed to find 8 grou…

Phylogenetic and genomic relationships in Setaria italica and its close relatives based on the molecular diversity and chromosomal organization of 5S…

2001

We have analyzed the phylogenetic and genomic relationships in the genus Setaria Beauv. including diploid and tetraploid species, by means of the molecular diversity of the 5S rDNA spacer and chromosomal organization of the 5S and 18S-5.8S-25S rDNA genes. PCR amplification of the 5S rDNA sequences gave specific patterns. All the species studied here share a common band of about 340 bp. An additional band of an approximately 300-bp repeat unit was found for Setaria verticillata and the Chinese accessions of Setaria italica and Setaria viridis. An additional band of 450 bp was found in the sole species Setaria faberii. Fluorescent in situ hybridization was used for physical mapping of the 5S …

Does catchment geodiversity foster stream biodiversity?

2019

Abstract Context One approach to maintain the resilience of biotic communities is to protect the variability of abiotic characteristics of Earth’s surface, i.e. geodiversity. In terrestrial environments, the relationship between geodiversity and biodiversity is well recognized. In streams, the abiotic properties of upstream catchments influence stream communities, but the relationships between catchment geodiversity and aquatic biodiversity have not been previously tested. Objectives The aim was to compare the effects of local environmental and catchment variables on stream biodiversity. We specifically explored the usefulness of catchment geodiversity in explaining the species richness on …

Identification of (In)Compatible S-genotypes and Molecular Characterisation of Italian Sweet Cherry Cultivars.

2017

Italy is the first sweet cherry producer in Europe. Its rich germplasm of local varieties has not been fully characterised or exploited in breeding programmes. Sweet cherry is a self-incompatible species; this trait is controlled by a gametophytically expressed multi-allelic (S) locus. The knowledge of sweet cherry S-alleles and cross-incompatibility groups is important for growers and breeders for choosing appropriate pollinators in the orchard and planning crosses. In this work, we analysed 94 sweet cherry cultivars native of large part of the Italian regions where cherry is grown. The microsatellite primer pair set and the reference cultivars agreed for cherry by the Prunus Working Group…

Fruit Quality Traits of Six Ancient Apple (Malus domesticaBorkh) Cultivars Grown in the Mediterranean Area

2015

ABSTRACTToday, ancient cultivars have been considered obsolete and replaced, leading to a dramatic loss of genetic diversity. In this trial we examined the quality of the six ancient apple cultivars: Bommino, Gelato, Miliadeci, Rotolari, Turco, and Virchiata. Fruit was submitted to the determination of physicochemical traits and a sensory profile was defined by a trained panel using 20 attributes. We also detected biometric data using a specific descriptor list. Obtained data showed interesting physicochemical and sensory traits among the observed cultivars. ‘Rotolari’, ‘Bommino’, and ‘Gelato’ should be used in breeding programs and revaluated for a placement on specific local markets.

Wild

2021

Graphical abstract